MGE detailed information
MGE type: Conjugative plasmid MGE length: 173714 bp
Accession: NZ_CP027441 Location: 1..173714 Organism: Escherichia coli strain 2012C-4502 Replicon: plasmid unnamed
Accession: NZ_CP027441 Location: 1..173714 Organism: Escherichia coli strain 2012C-4502 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6W69_RS25310 () | 264..530 | - | 267 | WP_001247860.1 | hypothetical protein | - |
| C6W69_RS25315 () | 623..1057 | - | 435 | WP_000218847.1 | hypothetical protein | - |
| C6W69_RS25325 () | 1789..2289 | - | 501 | WP_000117616.1 | antirestriction protein ArdA | - |
| C6W69_RS25335 () | 2754..3350 | - | 597 | WP_000978008.1 | hypothetical protein | - |
| C6W69_RS25340 () | 3347..4066 | - | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| C6W69_RS25345 () | 4063..4497 | - | 435 | WP_000845900.1 | conjugation system SOS inhibitor PsiB | - |
| C6W69_RS25350 () | 4552..6320 | - | 1769 | Protein_7 | ParB/RepB/Spo0J family partition protein | - |
| C6W69_RS25355 () | 6380..6613 | - | 234 | WP_000006027.1 | DUF905 domain-containing protein | - |
| C6W69_RS25360 () | 6666..7199 | - | 534 | WP_001276132.1 | single-stranded DNA-binding protein | - |
| C6W69_RS26625 () | 7636..7989 | - | 354 | WP_001367791.1 | hypothetical protein | - |
| C6W69_RS25370 () | 7952..8143 | - | 192 | WP_001027507.1 | hypothetical protein | - |
| C6W69_RS25375 () | 8143..8562 | - | 420 | WP_000271737.1 | DUF1380 family protein | - |
| C6W69_RS25380 () | 8609..8911 | - | 303 | WP_077776154.1 | antirestriction protein | - |
| C6W69_RS25390 () | 9448..10218 | - | 771 | WP_001006218.1 | hypothetical protein | - |
| C6W69_RS25395 () | 10263..10697 | - | 435 | WP_000274419.1 | DUF1380 family protein | - |
| C6W69_RS25400 () | 10711..10932 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| C6W69_RS25405 () | 10933..11616 | - | 684 | WP_000086114.1 | DNA methylase | - |
| C6W69_RS25410 () | 11693..12005 | - | 313 | Protein_18 | hypothetical protein | - |
| C6W69_RS25415 () | 12002..12904 | - | 903 | WP_001373099.1 | DUF1281 domain-containing protein | - |
| C6W69_RS25425 () | 13323..13571 | + | 249 | WP_000618108.1 | DinI-like family protein | - |
| C6W69_RS25430 () | 13568..14020 | + | 453 | WP_000109075.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| C6W69_RS25435 () | 14004..15274 | + | 1271 | Protein_22 | translesion error-prone DNA polymerase V subunit UmuC | - |
| C6W69_RS25445 () | 15478..16104 | + | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| C6W69_RS26720 () | 16101..16403 | + | 303 | WP_001245884.1 | hypothetical protein | - |
| C6W69_RS26725 () | 16808..17059 | + | 252 | WP_031322317.1 | hypothetical protein | - |
| C6W69_RS25465 () | 17059..17649 | + | 591 | WP_000194580.1 | hypothetical protein | - |
| C6W69_RS25470 () | 17669..18016 | - | 348 | WP_000142449.1 | hypothetical protein | - |
| C6W69_RS25475 () | 18135..18482 | + | 348 | WP_000762580.1 | hypothetical protein | - |
| C6W69_RS25480 () | 18500..20380 | - | 1881 | WP_106905471.1 | colicin | - |
| C6W69_RS25485 () | 20659..21324 | - | 666 | WP_000448923.1 | hypothetical protein | - |
| C6W69_RS25490 () | 21347..21556 | - | 210 | Protein_31 | IS21 family transposase IS21 | Transposase |
| C6W69_RS25500 () | 22053..24026 | + | 1974 | WP_024199761.1 | Hemin receptor | VF |
| C6W69_RS25505 () | 24045..24836 | + | 792 | WP_000977390.1 | DUF4198 domain-containing protein | - |
| C6W69_RS25515 () | 25341..25805 | + | 465 | WP_001373091.1 | IS66 family transposase ISEc23 | Transposase |
| C6W69_RS25520 () | 25757..26107 | + | 351 | WP_000950104.1 | IS66 family transposase IS682 | Transposase |
| C6W69_RS25525 () | 26138..27730 | + | 1593 | WP_000080210.1 | IS66 family transposase ISEc47 | Transposase |
| C6W69_RS25530 () | 27760..27933 | + | 174 | Protein_37 | DUF4113 domain-containing protein | - |
| C6W69_RS25535 () | 27935..28351 | - | 417 | WP_001278809.1 | plasmid partitioning/stability family protein | - |
| C6W69_RS25540 () | 28344..29324 | - | 981 | WP_000688510.1 | plasmid segregation protein ParM | - |
| C6W69_RS25545 () | 29739..30047 | - | 309 | WP_000030199.1 | hypothetical protein | - |
| C6W69_RS25550 () | 30134..30778 | - | 645 | WP_001144036.1 | ParA family protein | - |
| C6W69_RS25555 () | 30958..31764 | - | 807 | WP_000016966.1 | site-specific integrase | - |
| C6W69_RS25560 () | 31765..32070 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| C6W69_RS25565 () | 32072..32290 | - | 219 | WP_000813639.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| C6W69_RS25570 () | 32886..33146 | + | 261 | WP_000343100.1 | hypothetical protein | - |
| C6W69_RS25575 () | 33143..33733 | + | 591 | WP_106905472.1 | hypothetical protein | - |
| C6W69_RS25580 () | 33751..34098 | - | 348 | WP_000142427.1 | hypothetical protein | - |
| C6W69_RS25590 () | 34581..34952 | - | 372 | WP_001373114.1 | colicin | - |
| C6W69_RS25595 () | 35012..35743 | - | 732 | WP_000850414.1 | complement resistance protein TraT | - |
| C6W69_RS25605 () | 36015..36125 | - | 111 | Protein_50 | IS481 family transposase | - |
| C6W69_RS26730 () | 36129..36346 | - | 218 | Protein_51 | hypothetical protein | - |
| C6W69_RS25620 () | 36909..37886 | + | 978 | WP_011310114.1 | RepB family plasmid replication initiator protein | - |
| C6W69_RS25625 () | 38171..38885 | - | 715 | Protein_53 | tyrosine-type recombinase/integrase | - |
| C6W69_RS25630 () | 38949..40175 | - | 1227 | Protein_54 | ISL3 family transposase | - |
| C6W69_RS25635 () | 40329..40613 | - | 285 | WP_106905473.1 | serine/threonine protein kinase | - |
| C6W69_RS25645 () | 40743..41237 | - | 495 | WP_024173664.1 | Transcriptional repressor MprA | VF |
| C6W69_RS25650 () | 41358..42797 | - | 1440 | WP_001213534.1 | Hemolysin secretion protein D, chromosomal | VF |
| C6W69_RS25655 () | 42801..44921 | - | 2121 | WP_072094473.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| C6W69_RS25660 () | 44971..47967 | - | 2997 | WP_011310119.1 | Hemolysin, chromosomal | VF |
| C6W69_RS25665 () | 47969..48484 | - | 516 | WP_001365635.1 | RTX-I toxin-activating lysine-acyltransferase ApxIC | VF |
| C6W69_RS25675 () | 48912..49715 | - | 804 | WP_000899428.1 | Outer membrane protein A | VF |
| C6W69_RS25680 () | 49740..54035 | - | 4296 | WP_024173665.1 | Autotransporter adhesin SadA | VF |
| C6W69_RS25685 () | 54256..54540 | - | 285 | WP_000439678.1 | Major pilu subunit operon regulatory protein PapB | VF |
| C6W69_RS25700 () | 55148..55695 | + | 548 | Protein_64 | transposase | - |
| C6W69_RS25710 () | 56025..56459 | + | 435 | Protein_65 | IS110 family transposase ISEc21 | Transposase |
| C6W69_RS25715 () | 56546..58083 | + | 1538 | Protein_66 | IS3 family transposase | - |
| C6W69_RS25720 () | 58188..58817 | + | 630 | Protein_67 | transposase | - |
| C6W69_RS25725 () | 58837..59185 | + | 349 | Protein_68 | integrase core domain-containing protein | - |
| C6W69_RS25730 () | 59550..61106 | + | 1557 | WP_000554411.1 | L-lactate permease | - |
| C6W69_RS25735 () | 61157..61876 | + | 720 | WP_001102093.1 | (Fe-S)-binding protein | - |
| C6W69_RS25740 () | 61887..63302 | + | 1416 | WP_000054160.1 | iron-sulfur cluster-binding protein | - |
| C6W69_RS25745 () | 63307..64005 | + | 699 | WP_000431492.1 | lactate utilization protein C | - |
| C6W69_RS25750 () | 64046..64282 | - | 237 | WP_001369996.1 | hypothetical protein | - |
| C6W69_RS25755 () | 64350..64814 | - | 465 | WP_077632745.1 | IS3 family transposase ISEcB1 | Transposase |
| C6W69_RS25760 () | 64930..65241 | - | 312 | WP_000203483.1 | hypothetical protein | - |
| C6W69_RS25765 () | 65269..65460 | - | 192 | WP_000264906.1 | hypothetical protein | - |
| C6W69_RS25770 () | 65470..65835 | - | 366 | WP_000997727.1 | hypothetical protein | - |
| C6W69_RS25780 () | 65969..66178 | + | 210 | WP_044686870.1 | hypothetical protein | - |
| C6W69_RS25785 () | 66341..70243 | - | 3903 | WP_047083528.1 | Serine protease EspP | VF |
| C6W69_RS25790 () | 70740..71126 | - | 387 | WP_000598953.1 | thermonuclease family protein | - |
| C6W69_RS25795 () | 71285..71962 | + | 678 | WP_001158024.1 | hypothetical protein | - |
| C6W69_RS25810 () | 72452..72772 | - | 321 | WP_001373084.1 | hypothetical protein | - |
| C6W69_RS25815 () | 72830..73978 | - | 1149 | Protein_83 | IS3 family transposase | - |
| C6W69_RS26735 () | 74045..74134 | - | 90 | Protein_84 | transposase | - |
| C6W69_RS25820 () | 74387..75880 | + | 1494 | WP_077173497.1 | Adhesin YadA | VF |
| C6W69_RS25825 () | 76077..77180 | + | 1104 | Protein_86 | IS3 family transposase | - |
| C6W69_RS25835 () | 77488..79575 | + | 2088 | WP_001223214.1 | bifunctional siderophore receptor/adhesin Iha | - |
| C6W69_RS25840 () | 79836..80258 | - | 423 | WP_001212725.1 | Exc2 family lipoprotein | - |
| C6W69_RS25845 () | 80593..80775 | - | 183 | Protein_89 | IS110 family transposase | - |
| C6W69_RS25850 () | 80837..81025 | + | 189 | Protein_90 | IS66 family transposase IS682 | Transposase |
| C6W69_RS25860 () | 81309..81734 | - | 426 | WP_001373081.1 | subtilase AB5 cytotoxin subunit B | - |
| C6W69_RS25865 () | 81751..82794 | - | 1044 | WP_000912970.1 | subtilase AB5 cytotoxin subunit A | - |
| C6W69_RS25870 () | 82848..83812 | - | 965 | Protein_93 | transposase | - |
| C6W69_RS25875 () | 83843..84191 | - | 349 | Protein_94 | IS66 family transposase IS682 | Transposase |
| C6W69_RS25880 () | 84188..84613 | - | 426 | WP_000435654.1 | IS66 family transposase IS682 | Transposase |
| C6W69_RS25890 () | 84918..85103 | - | 186 | WP_071531845.1 | hypothetical protein | - |
| C6W69_RS25895 () | 85103..86349 | - | 1247 | Protein_97 | VENN motif pre-toxin domain-containing protein | - |
| C6W69_RS25900 () | 86653..86826 | + | 174 | Protein_98 | Tn3 family transposase ISPsy39 | Transposase |
| C6W69_RS25905 () | 87023..88019 | + | 997 | Protein_99 | IS110 family transposase IS5075 | Transposase |
| C6W69_RS26630 () | 88296..88373 | - | 78 | Protein_100 | colicin V | - |
| C6W69_RS26635 () | 88351..88587 | - | 237 | WP_032257624.1 | colicin V immunity protein | - |
| C6W69_RS26740 () | 89254..89511 | - | 258 | WP_001373122.1 | hypothetical protein | - |
| C6W69_RS25925 () | 89597..90091 | - | 495 | WP_001373089.1 | DUF2569 domain-containing protein | - |
| C6W69_RS25930 () | 90180..90434 | - | 255 | Protein_104 | hypothetical protein | - |
| C6W69_RS25935 () | 90431..91050 | - | 620 | Protein_105 | adhesin | - |
| C6W69_RS25940 () | 91469..91651 | - | 183 | WP_000205441.1 | hypothetical protein | - |
| C6W69_RS25945 () | 91661..91963 | - | 303 | WP_001370014.1 | hypothetical protein | - |
| C6W69_RS25950 () | 91950..101435 | - | 9486 | WP_044686884.1 | tRNA nuclease CdiA | VF |
| C6W69_RS25955 () | 101448..103214 | - | 1767 | WP_033802720.1 | Hemolysin transporter protein ShlB | VF |
| C6W69_RS25965 () | 103829..104068 | - | 240 | WP_000859017.1 | MarR family transcriptional regulator | - |
| C6W69_RS26745 () | 104081..104341 | - | 261 | WP_001373073.1 | hypothetical protein | - |
| C6W69_RS25990 () | 105037..106068 | - | 1032 | WP_000907876.1 | hypothetical protein | - |
| C6W69_RS26005 () | 106770..107411 | + | 642 | WP_000335846.1 | transcription termination factor NusG | - |
| C6W69_RS26010 () | 107552..108217 | + | 666 | WP_000154144.1 | hypothetical protein | - |
| C6W69_RS26020 () | 108484..109104 | + | 621 | WP_000176499.1 | DUF1449 family protein | - |
| C6W69_RS26025 () | 109131..110825 | + | 1695 | WP_000482662.1 | flotillin family protein | - |
| C6W69_RS26030 () | 110831..111148 | + | 318 | WP_001373093.1 | PilI type IV pilus biogenesis protein | - |
| C6W69_RS26040 () | 111757..112827 | + | 1071 | WP_001170190.1 | hypothetical protein | VF |
| C6W69_RS26045 () | 112832..113269 | + | 438 | WP_000539684.1 | type IV pilus biogenesis protein PilM | - |
| C6W69_RS26050 () | 113300..114919 | + | 1620 | WP_033802721.1 | Outer membrane lipoprotein BfpB | VF |
| C6W69_RS26055 () | 114940..116235 | + | 1296 | WP_000129890.1 | type 4b pilus protein PilO2 | - |
| C6W69_RS26060 () | 116225..116677 | + | 453 | WP_001112923.1 | type IV pilus biogenesis protein PilP | - |
| C6W69_RS26065 () | 116762..118270 | + | 1509 | WP_106905475.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| C6W69_RS26070 () | 118272..119372 | + | 1101 | WP_033802722.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| C6W69_RS26075 () | 119446..119982 | + | 537 | WP_001011156.1 | cleavage protein | - |
| C6W69_RS26080 () | 120036..120509 | + | 474 | WP_000870986.1 | hypothetical protein | VF |
| C6W69_RS26085 () | 120528..121163 | + | 636 | WP_000478595.1 | prepilin peptidase | - |
| C6W69_RS26090 () | 121168..122532 | + | 1365 | WP_001168070.1 | hypothetical protein | VF |
| C6W69_RS26105 () | 122990..123280 | + | 291 | WP_000681897.1 | hypothetical protein | - |
| C6W69_RS26110 () | 123372..123692 | - | 321 | WP_000695053.1 | hypothetical protein | - |
| C6W69_RS26115 () | 123952..124773 | + | 822 | WP_000804094.1 | hypothetical protein | - |
| C6W69_RS26120 () | 124863..126065 | + | 1203 | WP_000980152.1 | conjugal transfer protein TraF | - |
| C6W69_RS26125 () | 126424..126876 | + | 453 | WP_001081200.1 | DotD/TraH family lipoprotein | - |
| C6W69_RS26130 () | 126873..127709 | + | 837 | WP_000848138.1 | hypothetical protein | VF |
| C6W69_RS26135 () | 127693..128841 | + | 1149 | WP_000625245.1 | putative protein YggR | VF |
| C6W69_RS26140 () | 128838..129128 | + | 291 | WP_000817799.1 | hypothetical protein | - |
| C6W69_RS26145 () | 129192..133214 | + | 4023 | WP_000842441.1 | DNA primase | - |
| C6W69_RS26150 () | 133231..133581 | + | 351 | WP_001056369.1 | hypothetical protein | - |
| C6W69_RS26155 () | 133593..134288 | + | 696 | WP_001287263.1 | DotI/IcmL family type IV secretion protein | - |
| C6W69_RS26160 () | 134299..135273 | + | 975 | WP_001165562.1 | hypothetical protein | VF |
| C6W69_RS26165 () | 135277..136608 | + | 1332 | WP_001272011.1 | conjugal transfer protein TraO | - |
| C6W69_RS26170 () | 136605..137318 | + | 714 | WP_000787009.1 | conjugal transfer protein TraP | - |
| C6W69_RS26175 () | 137318..137845 | + | 528 | WP_001379391.1 | conjugal transfer protein TraQ | - |
| C6W69_RS26180 () | 137892..138290 | + | 399 | WP_000086066.1 | hypothetical protein | - |
| C6W69_RS26185 () | 138347..138598 | + | 252 | WP_001277575.1 | hypothetical protein | - |
| C6W69_RS26190 () | 138513..139331 | + | 819 | WP_072095383.1 | conjugal transfer protein TraT | - |
| C6W69_RS26195 () | 139386..139745 | + | 360 | WP_000380400.1 | hypothetical protein | - |
| C6W69_RS26200 () | 139745..140125 | + | 381 | WP_000690884.1 | hypothetical protein | - |
| C6W69_RS26205 () | 140301..143345 | + | 3045 | WP_001024763.1 | hypothetical protein | - |
| C6W69_RS26210 () | 143345..143962 | + | 618 | WP_000286860.1 | hypothetical protein | - |
| C6W69_RS26215 () | 143923..145128 | + | 1206 | WP_001189539.1 | conjugal transfer protein TraW | - |
| C6W69_RS26220 () | 145125..145694 | + | 570 | WP_001204060.1 | conjugal transfer protein TraX | - |
| C6W69_RS26225 () | 145767..147932 | + | 2166 | WP_000691798.1 | DotA/TraY family protein | - |
| C6W69_RS26230 () | 148003..148653 | + | 651 | WP_001098359.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| C6W69_RS26235 () | 148927..150513 | + | 1587 | WP_000004559.1 | TnsA endonuclease N-terminal domain-containing protein | - |
| C6W69_RS26240 () | 150651..150803 | - | 153 | WP_001367784.1 | Hok/Gef family protein | - |
| C6W69_RS26245 () | 151137..151379 | + | 243 | WP_001398505.1 | hypothetical protein | - |
| C6W69_RS26250 () | 151472..153007 | - | 1536 | WP_001373098.1 | phosphoethanolamine transferase | - |
| C6W69_RS26255 () | 153208..153663 | - | 456 | WP_001205142.1 | DUF2569 family protein | - |
| C6W69_RS26260 () | 153751..154374 | - | 624 | WP_033802723.1 | hypothetical protein | - |
| C6W69_RS26265 () | 154533..154919 | + | 387 | WP_000598953.1 | thermonuclease family protein | - |
| C6W69_RS26270 () | 155393..159472 | + | 4080 | WP_106879217.1 | Serine protease SepA autotransporter | VF |
| C6W69_RS26280 () | 159979..160344 | + | 366 | WP_000997722.1 | hypothetical protein | - |
| C6W69_RS26285 () | 160354..160545 | + | 192 | WP_000264906.1 | hypothetical protein | - |
| C6W69_RS26290 () | 160573..160884 | + | 312 | WP_000203481.1 | hypothetical protein | - |
| C6W69_RS26305 () | 161632..162912 | + | 1281 | WP_000121922.1 | IncI1-type conjugal transfer protein TrbA | - |
| C6W69_RS26310 () | 162909..164027 | + | 1119 | WP_106905476.1 | DsbC family protein | - |
| C6W69_RS26315 () | 164008..166311 | + | 2304 | WP_000077655.1 | TraM recognition domain-containing protein | - |
| C6W69_RS26320 () | 166437..166739 | + | 303 | WP_000334995.1 | hypothetical protein | - |
| C6W69_RS26325 () | 166837..167268 | - | 432 | WP_001335086.1 | hypothetical protein | - |
| C6W69_RS26330 () | 167336..170047 | - | 2712 | WP_011310099.1 | Protein TraI | Relaxase |
| C6W69_RS26335 () | 170059..170391 | - | 333 | WP_001291058.1 | hypothetical protein | - |
| C6W69_RS26340 () | 170624..170960 | + | 337 | Protein_173 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| C6W69_RS26345 () | 171045..171893 | - | 849 | WP_001077037.1 | DUF4942 domain-containing protein | - |
| C6W69_RS26360 () | 172472..172723 | + | 252 | WP_000148286.1 | helix-turn-helix domain-containing protein | - |
| C6W69_RS26365 () | 172754..172987 | - | 234 | WP_001370006.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|