MGE detailed information
MGE type: Genomic_island MGE length: 65523 bp
Accession: NZ_CP027390 Location: 3470648..3536170 Organism: Escherichia coli strain 2015C-4944 Replicon: chromosome
Accession: NZ_CP027390 Location: 3470648..3536170 Organism: Escherichia coli strain 2015C-4944 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AX062_RS19450 () | 3466743..3467318 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| AX062_RS19460 () | 3467698..3468963 | + | 1266 | WP_001218841.1 | integrase arm-type DNA-binding domain-containing protein | - |
| AX062_RS19465 () | 3469080..3470651 | - | 1572 | WP_000704132.1 | IS66 family transposase | - |
| AX062_RS19470 () | 3470648..3472267 | - | 1620 | WP_001375513.1 | ISL3 family transposase ISEc38 | Transposase |
| AX062_RS19475 () | 3472363..3473142 | + | 780 | Protein_3562 | IS4 family transposase ISEc13 | Transposase |
| AX062_RS19485 () | 3473930..3475579 | + | 1650 | WP_001121617.1 | hypothetical protein | VF |
| AX062_RS19490 () | 3475797..3475946 | + | 150 | Protein_3564 | IS1 family transposase | - |
| AX062_RS19495 () | 3476187..3477176 | + | 990 | WP_000953025.1 | hypothetical protein | VF |
| AX062_RS19500 () | 3477225..3477899 | + | 675 | WP_000609742.1 | hypothetical protein | VF |
| AX062_RS19505 () | 3478235..3479176 | + | 942 | Protein_3567 | IS630 family transposase ISEc33 | Transposase |
| AX062_RS19510 () | 3479777..3489448 | + | 9672 | WP_001239078.1 | hypothetical protein | VF |
| AX062_RS19515 () | 3489620..3489970 | + | 351 | Protein_3569 | IS256 family transposase ISEic2 | Transposase |
| AX062_RS19520 () | 3490383..3491006 | - | 624 | WP_001443729.1 | hypothetical protein | VF |
| AX062_RS19525 () | 3491222..3491500 | - | 279 | WP_000245867.1 | hypothetical protein | VF |
| AX062_RS19530 () | 3491506..3491727 | - | 222 | WP_001053840.1 | hypothetical protein | VF |
| AX062_RS19535 () | 3491764..3492171 | - | 408 | WP_000228587.1 | hypothetical protein | VF |
| AX062_RS19540 () | 3492178..3493122 | - | 945 | WP_001092012.1 | hypothetical protein | VF |
| AX062_RS19545 () | 3493143..3494285 | - | 1143 | WP_000935768.1 | hypothetical protein | VF |
| AX062_RS19550 () | 3494298..3494876 | - | 579 | WP_000381555.1 | hypothetical protein | VF |
| AX062_RS19555 () | 3494934..3495989 | - | 1056 | WP_001273459.1 | hypothetical protein | VF |
| AX062_RS19560 () | 3496132..3497352 | + | 1221 | WP_000953242.1 | hypothetical protein | VF |
| AX062_RS19565 () | 3497567..3500386 | - | 2820 | WP_000627895.1 | hypothetical protein | VF |
| AX062_RS19570 () | 3500447..3500917 | - | 471 | WP_000098786.1 | hypothetical protein | VF |
| AX062_RS19575 () | 3501050..3502666 | - | 1617 | WP_001121330.1 | hypothetical protein | VF |
| AX062_RS19580 () | 3503113..3503724 | - | 612 | WP_000492643.1 | hypothetical protein | VF |
| AX062_RS19585 () | 3503975..3504334 | + | 360 | WP_001005230.1 | hypothetical protein | VF |
| AX062_RS19590 () | 3504553..3505068 | - | 516 | WP_001360071.1 | hypothetical protein | VF |
| AX062_RS19595 () | 3505099..3506016 | - | 918 | WP_001050796.1 | hypothetical protein | VF |
| AX062_RS19600 () | 3505979..3506395 | - | 417 | WP_001443671.1 | hypothetical protein | VF |
| AX062_RS19605 () | 3506388..3506708 | - | 321 | WP_001062953.1 | hypothetical protein | VF |
| AX062_RS19610 () | 3506768..3508108 | - | 1341 | WP_000599710.1 | hypothetical protein | VF |
| AX062_RS19615 () | 3508092..3510119 | - | 2028 | WP_001037820.1 | hypothetical protein | VF |
| AX062_RS19620 () | 3510116..3510469 | - | 354 | WP_001050414.1 | hypothetical protein | VF |
| AX062_RS19625 () | 3510653..3510955 | + | 303 | WP_000338348.1 | hypothetical protein | VF |
| AX062_RS19630 () | 3511039..3511416 | + | 378 | WP_001059795.1 | hypothetical protein | VF |
| AX062_RS19635 () | 3511418..3511990 | + | 573 | WP_001233824.1 | hypothetical protein | VF |
| AX062_RS19640 () | 3511996..3512451 | + | 456 | WP_001063688.1 | hypothetical protein | VF |
| AX062_RS19645 () | 3512451..3513989 | + | 1539 | WP_000723928.1 | hypothetical protein | VF |
| AX062_RS19650 () | 3514003..3514458 | + | 456 | WP_000087469.1 | hypothetical protein | VF |
| AX062_RS19655 () | 3514844..3515257 | - | 414 | WP_000534969.1 | type III secretion system LEE transcriptional regulator GrlA | - |
| AX062_RS19660 () | 3515332..3515688 | - | 357 | WP_000605356.1 | nucleoside transporter | - |
| AX062_RS19665 () | 3515885..3516343 | + | 459 | WP_001342442.1 | hypothetical protein | VF |
| AX062_RS19670 () | 3516340..3517377 | - | 1038 | WP_001291687.1 | hypothetical protein | VF |
| AX062_RS19675 () | 3517370..3518146 | - | 777 | WP_001002808.1 | hypothetical protein | VF |
| AX062_RS19680 () | 3518146..3518415 | - | 270 | WP_000447503.1 | hypothetical protein | VF |
| AX062_RS19685 () | 3518415..3519068 | - | 654 | WP_001299990.1 | hypothetical protein | VF |
| AX062_RS19690 () | 3519073..3519726 | - | 654 | WP_000780743.1 | hypothetical protein | VF |
| AX062_RS19695 () | 3519713..3520312 | - | 600 | WP_000153999.1 | hypothetical protein | VF |
| AX062_RS19700 () | 3520309..3520623 | - | 315 | WP_000084152.1 | hypothetical protein | VF |
| AX062_RS19705 () | 3520636..3520854 | - | 219 | WP_000628726.1 | hypothetical protein | VF |
| AX062_RS19710 () | 3520869..3521240 | - | 372 | WP_001365456.1 | type III secretion system LEE master regulator Ler | - |
| AX062_RS19715 () | 3522448..3523593 | + | 1146 | WP_149009525.1 | hypothetical protein | VF |
| AX062_RS19720 () | 3523740..3524558 | + | 819 | WP_000821600.1 | YjiK family protein | - |
| AX062_RS19725 () | 3524764..3525339 | + | 576 | Protein_3611 | hypothetical protein | VF |
| AX062_RS19735 () | 3525386..3525936 | + | 551 | Protein_3612 | IS3 family transposase IS2 | Transposase |
| AX062_RS19740 () | 3525921..3526070 | + | 150 | WP_071527582.1 | DUF957 domain-containing protein | - |
| AX062_RS19750 () | 3526819..3528357 | + | 1539 | WP_001187182.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| AX062_RS19760 () | 3528723..3530057 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| AX062_RS19765 () | 3530137..3532284 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| AX062_RS19770 () | 3532343..3533800 | + | 1458 | WP_000856834.1 | dipeptide/tripeptide permease DtpC | - |
| AX062_RS19775 () | 3534037..3535554 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| AX062_RS19780 () | 3535673..3535846 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| AX062_RS19785 () | 3535874..3536170 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| AX062_RS19795 () | 3536397..3536669 | - | 273 | WP_000405647.1 | N-acetyltransferase | - |
| AX062_RS19800 () | 3536681..3536911 | - | 231 | WP_000371700.1 | (4Fe-4S)-binding protein | - |
| AX062_RS19805 () | 3537092..3538723 | + | 1632 | WP_001216487.1 | sensor histidine kinase | - |
| AX062_RS19810 () | 3538720..3539439 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|