MGE detailed information
MGE type: Conjugative plasmid MGE length: 68062 bp
Accession: NZ_CP027389 Location: 1..68062 Organism: Escherichia coli strain 2011C-4251 Replicon: plasmid unnamed
Accession: NZ_CP027389 Location: 1..68062 Organism: Escherichia coli strain 2011C-4251 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6P70_RS29070 () | 10..1450 | - | 1441 | Protein_0 | Hemolysin secretion protein D, plasmid | VF |
| C6P70_RS29075 () | 1454..3574 | - | 2121 | WP_000987096.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| C6P70_RS29080 () | 3624..6620 | - | 2997 | WP_000217740.1 | Hemolysin, chromosomal | VF |
| C6P70_RS29085 () | 6622..7137 | - | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| C6P70_RS29095 () | 7571..8784 | + | 1214 | WP_169301913.1 | IS3 family transposase IS629 | Transposase |
| C6P70_RS29100 () | 8829..9713 | + | 885 | Protein_5 | conjugal transfer protein TraH | - |
| C6P70_RS29105 () | 9710..12531 | + | 2822 | Protein_6 | conjugal transfer mating pair stabilization protein TraG | - |
| C6P70_RS29110 () | 12546..13049 | + | 504 | WP_000605510.1 | hypothetical protein | - |
| C6P70_RS29115 () | 13081..13812 | + | 732 | WP_000850424.1 | complement resistance protein TraT | - |
| C6P70_RS29120 () | 14064..16139 | + | 2076 | WP_001435266.1 | type IV conjugative transfer system coupling protein TraD | - |
| C6P70_RS29125 () | 16139..21409 | + | 5271 | WP_106913087.1 | Multifunctional conjugation protein TraI | Relaxase |
| C6P70_RS29130 () | 21429..22175 | + | 747 | WP_000205763.1 | conjugal transfer pilus acetylase TraX | - |
| C6P70_RS29135 () | 22234..23094 | + | 861 | WP_000704522.1 | putative protein YcjY | VF |
| C6P70_RS29140 () | 23197..23757 | + | 561 | WP_000840467.1 | fertility inhibition protein FinO | - |
| C6P70_RS29145 () | 23890..24102 | + | 213 | WP_001302189.1 | ANR family transcriptional regulator | - |
| C6P70_RS29150 () | 24347..24808 | + | 462 | WP_001233850.1 | thermonuclease family protein | - |
| C6P70_RS29155 () | 24854..25063 | + | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| C6P70_RS29160 () | 25248..25385 | - | 138 | Protein_17 | IS3 family transposase | - |
| C6P70_RS29170 () | 26716..26973 | - | 258 | Protein_19 | IS3 family transposase IS911 | Transposase |
| C6P70_RS29180 () | 27095..27409 | - | 315 | WP_001435275.1 | hypothetical protein | - |
| C6P70_RS29185 () | 27781..27960 | - | 180 | WP_000526860.1 | hypothetical protein | VF |
| C6P70_RS29190 () | 28163..28537 | + | 375 | WP_001368887.1 | hypothetical protein | - |
| C6P70_RS29195 () | 28848..29009 | - | 162 | Protein_23 | epoxyqueuosine reductase QueH | - |
| C6P70_RS29200 () | 29060..29200 | + | 141 | Protein_24 | serine/threonine protein kinase | - |
| C6P70_RS29205 () | 29324..30064 | + | 741 | WP_001066926.1 | IS91 family transposase ISMno23 | Transposase |
| C6P70_RS29210 () | 30348..31325 | - | 978 | WP_000361617.1 | RepB family plasmid replication initiator protein | - |
| C6P70_RS29220 () | 31971..32376 | - | 406 | Protein_27 | DDE-type integrase/transposase/recombinase | - |
| C6P70_RS29225 () | 32378..32665 | - | 288 | WP_001270421.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C6P70_RS29230 () | 32662..32913 | - | 252 | WP_001132895.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| C6P70_RS29855 () | 33087..33260 | - | 174 | WP_001435278.1 | hypothetical protein | - |
| C6P70_RS29240 () | 33631..34836 | + | 1206 | WP_000817643.1 | Plasmid partition protein A | VF |
| C6P70_RS29245 () | 34833..35795 | + | 963 | WP_000756329.1 | ParB/RepB/Spo0J family partition protein | - |
| C6P70_RS29250 () | 35936..37098 | - | 1163 | Protein_33 | DUF4113 domain-containing protein | - |
| C6P70_RS29255 () | 36979..37396 | + | 418 | Protein_34 | DUF1281 domain-containing protein | - |
| C6P70_RS29260 () | 37400..37705 | + | 306 | WP_032162675.1 | hypothetical protein | - |
| C6P70_RS29270 () | 37782..38465 | + | 684 | WP_000085940.1 | DNA methylase | - |
| C6P70_RS29275 () | 38466..38687 | + | 222 | WP_001104880.1 | hypothetical protein | - |
| C6P70_RS29280 () | 38699..39133 | + | 435 | WP_000274488.1 | DUF1380 family protein | - |
| C6P70_RS30050 () | 39179..39955 | + | 777 | WP_001005019.1 | hypothetical protein | - |
| C6P70_RS29295 () | 40495..40773 | + | 279 | WP_072131700.1 | antirestriction protein | - |
| C6P70_RS29300 () | 40820..41242 | + | 423 | WP_000271758.1 | DUF1380 family protein | - |
| C6P70_RS29305 () | 41239..41430 | + | 192 | WP_001024839.1 | hypothetical protein | - |
| C6P70_RS30055 () | 41976..42182 | + | 207 | WP_000275847.1 | hypothetical protein | - |
| C6P70_RS29320 () | 42296..42493 | + | 198 | WP_045174704.1 | hypothetical protein | - |
| C6P70_RS29325 () | 42612..43429 | + | 818 | Protein_45 | DUF932 domain-containing protein | - |
| C6P70_RS29330 () | 43708..45045 | + | 1338 | Protein_46 | IS4 family transposase ISCro3 | Transposase |
| C6P70_RS29335 () | 45166..45807 | - | 642 | WP_169072575.1 | hypothetical protein | VF |
| C6P70_RS29340 () | 46089..46472 | + | 384 | WP_001151541.1 | relaxosome protein TraM | - |
| C6P70_RS29355 () | 48681..51341 | + | 2661 | WP_000770130.1 | Metalloprotease StcE | VF |
| C6P70_RS29360 () | 51425..52300 | + | 876 | WP_001368871.1 | Type II secretion system protein C | VF |
| C6P70_RS29365 () | 52301..54271 | + | 1971 | WP_001368872.1 | Type II secretion system protein D | VF |
| C6P70_RS29370 () | 54268..55770 | + | 1503 | WP_001368867.1 | Type II secretion system protein E | VF |
| C6P70_RS29375 () | 55772..56995 | + | 1224 | WP_001173149.1 | Type II secretion system protein F | VF |
| C6P70_RS29380 () | 57026..57460 | + | 435 | WP_001231213.1 | Type II secretion system protein G | VF |
| C6P70_RS29385 () | 57457..58008 | + | 552 | WP_000082928.1 | type II secretion system minor pseudopilin GspH | - |
| C6P70_RS29390 () | 58023..58370 | + | 348 | WP_024173653.1 | Type II secretion system protein I | VF |
| C6P70_RS29395 () | 58367..58966 | + | 600 | WP_000082784.1 | Type II secretion system protein J | VF |
| C6P70_RS29400 () | 58963..59940 | + | 978 | WP_000842182.1 | Putative type II secretion system protein K | VF |
| C6P70_RS29405 () | 59979..61151 | + | 1173 | WP_001368870.1 | Type II secretion system protein L | VF |
| C6P70_RS29410 () | 61138..61653 | + | 516 | WP_000998852.1 | Type II secretion system protein M | VF |
| C6P70_RS29415 () | 61705..62538 | + | 834 | WP_000088802.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| C6P70_RS29420 () | 62632..63033 | + | 402 | WP_001222322.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| C6P70_RS29425 () | 63108..63323 | + | 216 | Protein_64 | IS3 family transposase IS1203 | Transposase |
| C6P70_RS29435 () | 63622..63915 | + | 294 | Protein_65 | hypothetical protein | - |
| C6P70_RS29440 () | 63972..65185 | + | 1214 | WP_169301915.1 | IS3 family transposase IS629 | Transposase |
| C6P70_RS29455 () | 66651..67493 | + | 843 | WP_106913092.1 | polysaccharide deacetylase family protein | - |
| C6P70_RS29460 () | 67471..68062 | + | 592 | WP_159032310.1 | glycosyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|