MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 91648 bp
Accession: NZ_CP027374 Location: 1..91648 Organism: Escherichia coli strain 05-3629 Replicon: plasmid unnamed1
Accession: NZ_CP027374 Location: 1..91648 Organism: Escherichia coli strain 05-3629 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6P66_RS25380 () | 39..371 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| C6P66_RS25385 () | 382..3081 | + | 2700 | WP_061348418.1 | Protein TraI | Relaxase |
| C6P66_RS25390 () | 3107..3679 | + | 573 | WP_000332079.1 | hypothetical protein | - |
| C6P66_RS25395 () | 3729..5918 | - | 2190 | WP_061348417.1 | peptidase domain-containing ABC transporter | - |
| C6P66_RS25400 () | 5918..7171 | - | 1254 | WP_001685252.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| C6P66_RS25405 () | 7274..7909 | - | 636 | WP_000999378.1 | CPBP family intramembrane metalloprotease | - |
| C6P66_RS25420 () | 8694..10985 | - | 2292 | WP_106916374.1 | conjugal transfer protein TrbC | - |
| C6P66_RS25425 () | 10978..12048 | - | 1071 | WP_052895276.1 | IncI1-type conjugal transfer protein TrbB | - |
| C6P66_RS25430 () | 12067..13275 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| - () | 13455..13517 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 13455..13517 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 13455..13517 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 13455..13517 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| C6P66_RS25435 () | 13567..13719 | + | 153 | WP_001303307.1 | Hok/Gef family protein | Toxin Detail |
| C6P66_RS25440 () | 13791..14042 | - | 252 | WP_001291965.1 | hypothetical protein | - |
| - () | 14429..14480 | - | 52 | NuclAT_1 | - | - |
| - () | 14429..14480 | - | 52 | NuclAT_1 | - | - |
| - () | 14429..14480 | - | 52 | NuclAT_1 | - | - |
| - () | 14429..14480 | - | 52 | NuclAT_1 | - | - |
| C6P66_RS27175 () | 15320..15457 | - | 138 | WP_049290858.1 | hypothetical protein | - |
| C6P66_RS25460 () | 15502..16728 | - | 1227 | WP_052895285.1 | IS200-IS605 family transposase ISSen6 | Transposase |
| C6P66_RS25465 () | 17331..17540 | + | 210 | WP_052895278.1 | HEAT repeat domain-containing protein | - |
| C6P66_RS25470 () | 17612..18274 | - | 663 | WP_052895279.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| C6P66_RS25475 () | 18345..20516 | - | 2172 | WP_106916376.1 | DotA/TraY family protein | - |
| C6P66_RS25480 () | 20613..21197 | - | 585 | WP_001037982.1 | IncI1-type conjugal transfer protein TraX | - |
| C6P66_RS25485 () | 21226..22428 | - | 1203 | WP_001189160.1 | IncI1-type conjugal transfer protein TraW | - |
| C6P66_RS25490 () | 22395..23009 | - | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| C6P66_RS25495 () | 23009..26053 | - | 3045 | WP_001024782.1 | IncI1-type conjugal transfer protein TraU | - |
| C6P66_RS25500 () | 26143..26943 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| C6P66_RS25505 () | 26927..27115 | - | 189 | WP_052895282.1 | putative conjugal transfer protein TraS | - |
| C6P66_RS25510 () | 27179..27583 | - | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| C6P66_RS25515 () | 27634..28161 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| C6P66_RS25520 () | 28161..28865 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| C6P66_RS25525 () | 28865..30154 | - | 1290 | WP_106916378.1 | conjugal transfer protein TraO | - |
| C6P66_RS25530 () | 30157..31140 | - | 984 | WP_001191877.1 | hypothetical protein | VF |
| C6P66_RS25535 () | 31151..31843 | - | 693 | WP_000138550.1 | DotI/IcmL family type IV secretion protein | - |
| C6P66_RS25540 () | 31840..32187 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| C6P66_RS25545 () | 32205..35972 | - | 3768 | WP_096268558.1 | DNA primase | - |
| C6P66_RS25550 () | 36061..36612 | - | 552 | WP_047666746.1 | Phospholipase D | VF |
| C6P66_RS25555 () | 36626..36916 | - | 291 | WP_001314267.1 | hypothetical protein | - |
| C6P66_RS25560 () | 36913..38061 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| C6P66_RS25565 () | 38058..38876 | - | 819 | WP_032310251.1 | hypothetical protein | VF |
| C6P66_RS25570 () | 38873..39331 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| C6P66_RS25575 () | 39726..40310 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| C6P66_RS25580 () | 40370..41572 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| C6P66_RS25585 () | 41658..42482 | - | 825 | WP_001545755.1 | hypothetical protein | - |
| C6P66_RS25590 () | 42633..43787 | - | 1155 | WP_052895294.1 | integrase | - |
| C6P66_RS27180 () | 44401..44587 | + | 187 | Protein_39 | prepilin | - |
| C6P66_RS25630 () | 45695..46783 | - | 1089 | Protein_40 | hypothetical protein | VF |
| C6P66_RS25635 () | 46783..47439 | - | 657 | WP_001193553.1 | hypothetical protein | VF |
| C6P66_RS25640 () | 47424..47984 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| C6P66_RS25645 () | 47994..48608 | - | 615 | WP_106916380.1 | hypothetical protein | VF |
| C6P66_RS25650 () | 48626..49723 | - | 1098 | WP_001208805.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| C6P66_RS25655 () | 49736..51289 | - | 1554 | WP_000362202.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| C6P66_RS25660 () | 51300..51752 | - | 453 | WP_001247336.1 | hypothetical protein | VF |
| C6P66_RS25665 () | 51739..53034 | - | 1296 | WP_021560540.1 | hypothetical protein | VF |
| C6P66_RS25670 () | 53027..54709 | - | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| C6P66_RS25675 () | 54723..55160 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| C6P66_RS25680 () | 55160..56227 | - | 1068 | WP_001302629.1 | hypothetical protein | VF |
| C6P66_RS25690 () | 56901..57173 | - | 273 | Protein_51 | pili assembly chaperone | - |
| C6P66_RS25700 () | 57373..57924 | - | 552 | WP_000744644.1 | hypothetical protein | - |
| C6P66_RS25710 () | 58097..58780 | - | 684 | WP_000213857.1 | conjugal transfer protein TraC | - |
| C6P66_RS25720 () | 59034..59567 | - | 534 | WP_001303319.1 | transcription termination factor NusG | - |
| C6P66_RS25730 () | 60009..60296 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| C6P66_RS25735 () | 60214..60477 | - | 264 | WP_001324596.1 | ash family protein | - |
| C6P66_RS25750 () | 61448..62479 | + | 1032 | WP_022630251.1 | replication initiation protein | - |
| C6P66_RS25770 () | 63389..63658 | + | 270 | WP_000079940.1 | hypothetical protein | - |
| C6P66_RS25775 () | 63655..63936 | + | 282 | WP_000969996.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C6P66_RS25780 () | 64136..64402 | - | 267 | WP_000627828.1 | hypothetical protein | - |
| C6P66_RS25785 () | 64402..64896 | - | 495 | WP_106916384.1 | hypothetical protein | - |
| C6P66_RS25790 () | 64952..65554 | - | 603 | WP_021561689.1 | hypothetical protein | - |
| C6P66_RS25795 () | 65663..65839 | + | 177 | Protein_63 | hypothetical protein | - |
| C6P66_RS25800 () | 65861..66196 | - | 336 | WP_001080730.1 | colicin 1A immunity protein | - |
| C6P66_RS25810 () | 66325..66672 | + | 348 | WP_044704890.1 | hypothetical protein | - |
| C6P66_RS25815 () | 66690..67280 | - | 591 | WP_000198612.1 | hypothetical protein | - |
| C6P66_RS25820 () | 67280..67537 | - | 258 | WP_000343101.1 | hypothetical protein | - |
| C6P66_RS25825 () | 68107..68520 | + | 414 | WP_000465045.1 | hypothetical protein | - |
| C6P66_RS25830 () | 68522..69301 | + | 780 | WP_001164201.1 | site-specific integrase | - |
| C6P66_RS25835 () | 69481..70125 | + | 645 | WP_001144036.1 | ParA family protein | - |
| C6P66_RS25840 () | 70212..70520 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| C6P66_RS25845 () | 70934..71914 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| C6P66_RS25850 () | 71907..72323 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| C6P66_RS25855 () | 72325..73599 | - | 1275 | WP_000457524.1 | Y-family DNA polymerase | - |
| C6P66_RS25860 () | 73599..74036 | - | 438 | WP_106916386.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| C6P66_RS25865 () | 74033..74281 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| C6P66_RS25885 () | 75304..77028 | + | 1725 | WP_000138832.1 | group II intron reverse transcriptase/maturase | - |
| C6P66_RS25890 () | 77105..78007 | + | 903 | WP_052892454.1 | DUF1281 domain-containing protein | - |
| C6P66_RS25895 () | 78004..78315 | + | 312 | WP_072127363.1 | hypothetical protein | - |
| C6P66_RS25900 () | 78391..79074 | + | 684 | WP_000085874.1 | DNA methylase | - |
| C6P66_RS25905 () | 79075..79296 | + | 222 | WP_001104885.1 | hypothetical protein | - |
| C6P66_RS25910 () | 79309..79743 | + | 435 | WP_032307291.1 | DUF1380 family protein | - |
| C6P66_RS27050 () | 79794..80564 | + | 771 | WP_199852862.1 | hypothetical protein | - |
| C6P66_RS25925 () | 81104..81406 | + | 303 | WP_159032335.1 | antirestriction protein | - |
| C6P66_RS25930 () | 81453..81875 | + | 423 | WP_000271694.1 | DUF1380 family protein | - |
| C6P66_RS25935 () | 81872..82063 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| C6P66_RS25945 () | 82134..82448 | + | 315 | WP_001434357.1 | hypothetical protein | - |
| C6P66_RS25955 () | 82832..83359 | + | 528 | WP_001276121.1 | single-stranded DNA-binding protein | - |
| C6P66_RS25960 () | 83416..83649 | + | 234 | WP_001042948.1 | DUF905 domain-containing protein | - |
| C6P66_RS25965 () | 83711..85669 | + | 1959 | WP_106916392.1 | ParB/RepB/Spo0J family partition protein | - |
| C6P66_RS25970 () | 85724..86158 | + | 435 | WP_106916394.1 | conjugation system SOS inhibitor PsiB | - |
| C6P66_RS25975 () | 86155..86874 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| C6P66_RS25980 () | 86871..87467 | + | 597 | WP_000978012.1 | hypothetical protein | - |
| C6P66_RS25990 () | 87930..88430 | + | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
| C6P66_RS26005 () | 89159..89593 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| C6P66_RS26010 () | 89687..89953 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| C6P66_RS26015 () | 90018..90956 | + | 939 | WP_000038403.1 | Recombination-promoting nuclease RpnA | VF |
| C6P66_RS26020 () | 90979..91176 | + | 198 | WP_001348086.1 | hypothetical protein | - |
| C6P66_RS26025 () | 91207..91458 | - | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|