MGE detailed information
MGE type: Prophage MGE length: 50669 bp
Accession: NZ_CP027361 Location: 2040987..2091655 Organism: Escherichia coli strain 2014C-4639 Replicon: chromosome
Accession: NZ_CP027361 Location: 2040987..2091655 Organism: Escherichia coli strain 2014C-4639 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RR62_RS10080 (2036691) | 2036691..2037773 | + | 1083 | WP_001295681.1 | LPS export ABC transporter permease LptG | - |
| RR62_RS10085 (2037892) | 2037892..2039394 | - | 1503 | WP_001332879.1 | DUF853 domain-containing protein | - |
| RR62_RS10090 (2039524) | 2039524..2040543 | - | 1020 | WP_000061768.1 | NADPH-dependent aldehyde reductase Ahr | - |
| RR62_RS10100 (2040987) | 2040987..2042249 | + | 1263 | WP_000772685.1 | Prophage integrase IntA ; Integrase | Integrase |
| RR62_RS10105 (2042493) | 2042493..2043332 | - | 840 | WP_000356577.1 | MltR family transcriptional regulator | - |
| RR62_RS10110 (2043471) | 2043471..2045057 | - | 1587 | WP_000091133.1 | hypothetical protein | - |
| RR62_RS10115 (2045347) | 2045347..2046024 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| RR62_RS10120 (2046024) | 2046024..2046371 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| RR62_RS10125 (2046391) | 2046391..2047962 | + | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| RR62_RS10130 (2048272) | 2048272..2048544 | - | 273 | WP_001185332.1 | ogr/Delta-like zinc finger family protein | - |
| RR62_RS10135 (2048546) | 2048546..2049100 | - | 555 | WP_000991130.1 | phage polarity suppression protein | - |
| RR62_RS10140 (2049097) | 2049097..2049849 | - | 753 | WP_000214377.1 | hypothetical protein | - |
| RR62_RS10145 (2050764) | 2050764..2051024 | + | 261 | WP_001084853.1 | AlpA family transcriptional regulator | - |
| RR62_RS10150 (2051021) | 2051021..2051569 | + | 549 | WP_000761643.1 | host cell division inhibitor Icd-like protein | - |
| RR62_RS10155 (2051569) | 2051569..2051793 | + | 225 | WP_001014979.1 | hypothetical protein | - |
| RR62_RS10160 (2051790) | 2051790..2052113 | + | 324 | WP_000842358.1 | DUF5375 family protein | - |
| RR62_RS10165 (2052128) | 2052128..2054461 | + | 2334 | WP_000016235.1 | primase-like DNA-binding domain-containing protein | - |
| RR62_RS10170 (2055367) | 2055367..2056191 | + | 825 | WP_000594911.1 | hypothetical protein | - |
| RR62_RS10175 (2056240) | 2056240..2056689 | - | 450 | WP_000460181.1 | hypothetical protein | - |
| RR62_RS10185 (2058180) | 2058180..2059350 | + | 1171 | Protein_1928 | IS3 family transposase | - |
| RR62_RS10190 (2059433) | 2059433..2059690 | + | 258 | WP_000177060.1 | hypothetical protein | - |
| RR62_RS10195 (2060248) | 2060248..2061015 | - | 768 | WP_000175457.1 | Fe(3+) dicitrate transport ATP-binding protein FecE | VF |
| RR62_RS10200 (2061016) | 2061016..2061972 | - | 957 | WP_000684856.1 | Fe(3+) dicitrate transport system permease protein FecD | VF |
| RR62_RS10205 (2061969) | 2061969..2062967 | - | 999 | WP_000125190.1 | Fe(3+) dicitrate transport system permease protein FecC | VF |
| RR62_RS10210 (2062964) | 2062964..2063866 | - | 903 | WP_000879164.1 | Fe(3+) dicitrate ABC transporter substrate-binding protein FecB | - |
| RR62_RS10215 (2063911) | 2063911..2066235 | - | 2325 | WP_000188267.1 | TonB-dependent Fe(3+) dicitrate receptor FecA | - |
| RR62_RS10220 (2066322) | 2066322..2067275 | - | 954 | WP_001068910.1 | ferric citrate uptake sigma factor regulator FecR | - |
| RR62_RS10225 (2067272) | 2067272..2067793 | - | 522 | WP_001283626.1 | putative RNA polymerase sigma factor FecI | VF |
| RR62_RS10230 (2067930) | 2067930..2067998 | + | 69 | WP_211180522.1 | protein YkiE | - |
| RR62_RS10235 (2068085) | 2068085..2068782 | + | 698 | Protein_1938 | IS1-like element IS1F family transposase | - |
| RR62_RS27185 (2068927) | 2068927..2069073 | + | 147 | Protein_1939 | IS3 family transposase | - |
| RR62_RS10245 (2069100) | 2069100..2069204 | + | 105 | Protein_1940 | IS3 family transposase | - |
| RR62_RS10250 (2069520) | 2069520..2069801 | + | 282 | WP_223349491.1 | biofilm development regulator YmgB/AriR family protein | - |
| RR62_RS10255 (2070121) | 2070121..2070252 | - | 132 | Protein_1942 | IS3 family transposase | - |
| RR62_RS10260 (2070534) | 2070534..2071892 | + | 1359 | WP_000823243.1 | esterase-like activity of phytase family protein | - |
| RR62_RS10265 (2072131) | 2072131..2073516 | - | 1386 | WP_000998019.1 | IS66 family transposase ISEc8 | Transposase |
| RR62_RS10270 (2073566) | 2073566..2073913 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| RR62_RS10275 (2073910) | 2073910..2074290 | - | 381 | WP_001171523.1 | IS66 family transposase ISEc8 | Transposase |
| RR62_RS10280 (2074645) | 2074645..2075079 | - | 435 | WP_001221615.1 | zinc-ribbon domain-containing protein | - |
| RR62_RS10285 (2075067) | 2075067..2075309 | - | 243 | Protein_1948 | putative zinc ribbon protein | - |
| RR62_RS10290 (2075373) | 2075373..2076529 | + | 1157 | WP_085948184.1 | IS3 family transposase ISSd1 | Transposase |
| RR62_RS10295 (2076480) | 2076480..2078930 | + | 2451 | WP_106875245.1 | hypothetical protein | - |
| RR62_RS10300 (2079006) | 2079006..2079461 | + | 456 | WP_000581504.1 | IrmA family protein | - |
| RR62_RS10305 (2079540) | 2079540..2079773 | + | 234 | WP_001119729.1 | DUF905 family protein | - |
| RR62_RS10310 (2079873) | 2079873..2080691 | + | 819 | WP_001234622.1 | DUF932 domain-containing protein | - |
| RR62_RS10315 (2080746) | 2080746..2081231 | + | 486 | WP_000849588.1 | antirestriction protein | - |
| RR62_RS10320 (2081247) | 2081247..2081723 | + | 477 | WP_001186774.1 | RadC family protein | - |
| RR62_RS10325 (2081786) | 2081786..2082007 | + | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| RR62_RS10330 (2082170) | 2082170..2082538 | + | 369 | WP_001315620.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| RR62_RS10335 (2082628) | 2082628..2083002 | + | 375 | WP_000854753.1 | TA system toxin CbtA family protein | Toxin Detail |
| RR62_RS10340 (2082999) | 2082999..2083487 | + | 489 | WP_000777547.1 | DUF5983 family protein | - |
| RR62_RS10345 (2083499) | 2083499..2083696 | + | 198 | WP_000839281.1 | DUF957 domain-containing protein | - |
| RR62_RS10350 (2083781) | 2083781..2083930 | + | 150 | Protein_1961 | restriction endonuclease subunit M | - |
| RR62_RS27190 (2084698) | 2084698..2084841 | - | 144 | Protein_1962 | HNH endonuclease | - |
| RR62_RS10355 (2084978) | 2084978..2085628 | + | 651 | WP_001037966.1 | HNH endonuclease | - |
| RR62_RS10360 (2085636) | 2085636..2086616 | - | 981 | WP_000991415.1 | sialate O-acetylesterase | - |
| RR62_RS10365 (2086681) | 2086681..2087787 | - | 1107 | WP_001341302.1 | N-acetylneuraminate epimerase | - |
| RR62_RS10370 (2087807) | 2087807..2088523 | - | 717 | WP_071998827.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| RR62_RS10375 (2089979) | 2089979..2090581 | + | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| RR62_RS10380 (2091059) | 2091059..2091655 | + | 597 | WP_000044711.1 | Tyrosine recombinase XerD | VF |
| RR62_RS10385 (2092136) | 2092136..2092684 | + | 549 | WP_000695546.1 | type 1 fimbrial major subunit FimA | - |
| RR62_RS10390 (2092749) | 2092749..2093288 | + | 540 | WP_000824105.1 | fimbrial protein | - |
| RR62_RS10395 (2093325) | 2093325..2094050 | + | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|