MGE detailed information
MGE type: Genomic_island MGE length: 47361 bp
Accession: NZ_CP027118 Location: 4175061..4222421 Organism: Escherichia coli strain 26561 Replicon: chromosome
Accession: NZ_CP027118 Location: 4175061..4222421 Organism: Escherichia coli strain 26561 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CYQ10_RS21575 () | 4171235..4171414 | - | 180 | WP_001313264.1 | hypothetical protein | - |
| CYQ10_RS25605 () | 4171462..4171656 | - | 195 | WP_126870310.1 | hypothetical protein | - |
| CYQ10_RS21580 () | 4171706..4173685 | - | 1980 | WP_000533458.1 | PhoX family phosphatase | - |
| CYQ10_RS21590 () | 4174364..4174712 | + | 349 | Protein_3930 | transposase | - |
| CYQ10_RS21595 () | 4174776..4175576 | + | 801 | Protein_3931 | IS3 family transposase ISKpn37 | Transposase |
| CYQ10_RS21600 () | 4175613..4177150 | - | 1538 | Protein_3932 | IS66 family transposase ISEc8 | Transposase |
| CYQ10_RS21605 () | 4177200..4177547 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| CYQ10_RS21610 () | 4177544..4177924 | - | 381 | WP_021572005.1 | IS66 family transposase ISEc8 | Transposase |
| CYQ10_RS21620 () | 4178504..4179295 | - | 792 | WP_000977396.1 | DUF4198 domain-containing protein | - |
| CYQ10_RS21625 () | 4179314..4179934 | - | 621 | Protein_3936 | Hemin receptor | VF |
| CYQ10_RS21630 () | 4179931..4180511 | - | 581 | Protein_3937 | IS3 family transposase ISEc27 | Transposase |
| CYQ10_RS21635 () | 4180589..4180840 | - | 252 | Protein_3938 | IS3 family transposase ISSfl10 | Transposase |
| CYQ10_RS21640 () | 4180959..4182038 | - | 1080 | WP_061362191.1 | adhesin | - |
| CYQ10_RS21645 () | 4182114..4182614 | - | 501 | WP_000620428.1 | Minor fimbrial protein PrsF | VF |
| CYQ10_RS21650 () | 4182690..4183217 | - | 528 | WP_061362192.1 | Fimbrial protein PapE | VF |
| CYQ10_RS21655 () | 4183244..4183780 | - | 537 | WP_000597715.1 | Fimbrial adapter PapK | VF |
| CYQ10_RS21660 () | 4183790..4184371 | - | 582 | WP_000261302.1 | hypothetical protein | VF |
| CYQ10_RS21665 () | 4184408..4185142 | - | 735 | WP_000265730.1 | Chaperone protein PapD | VF |
| CYQ10_RS21670 () | 4185213..4187723 | - | 2511 | WP_001318123.1 | Outer membrane usher protein PapC | VF |
| CYQ10_RS21675 () | 4187781..4187924 | - | 144 | Protein_3946 | PAP fimbrial minor pilin protein | VF |
| CYQ10_RS21680 () | 4187937..4188470 | - | 534 | WP_061362193.1 | hypothetical protein | - |
| CYQ10_RS21690 () | 4188928..4189386 | + | 459 | WP_021513224.1 | hypothetical protein | - |
| CYQ10_RS21695 () | 4189486..4190172 | + | 687 | WP_000406622.1 | CPBP family intramembrane metalloprotease | - |
| CYQ10_RS21700 () | 4190347..4190625 | - | 279 | WP_071526565.1 | microcin McmA | - |
| CYQ10_RS21710 () | 4190878..4191143 | - | 266 | Protein_3951 | ATP-binding cassette domain-containing protein | - |
| CYQ10_RS21715 () | 4191457..4191693 | - | 237 | WP_000958095.1 | AlpA family transcriptional regulator | - |
| CYQ10_RS21720 () | 4191762..4192334 | - | 573 | WP_061362194.1 | hypothetical protein | - |
| CYQ10_RS21725 () | 4192581..4193147 | - | 567 | WP_001126818.1 | inovirus-type Gp2 protein | - |
| CYQ10_RS21735 () | 4194234..4195447 | - | 1214 | Protein_3955 | IS3 family transposase | - |
| CYQ10_RS21740 () | 4195485..4196649 | + | 1165 | Protein_3956 | IS256 family transposase ISSod4 | Transposase |
| CYQ10_RS21745 () | 4196829..4198877 | - | 2049 | WP_061362196.1 | TonB-dependent siderophore receptor IreA | - |
| CYQ10_RS21750 () | 4199656..4200387 | - | 732 | WP_061362197.1 | inovirus Gp2 family protein | - |
| CYQ10_RS21770 () | 4201918..4203048 | - | 1131 | WP_061362199.1 | hypothetical protein | - |
| CYQ10_RS21775 () | 4203233..4204117 | + | 885 | WP_061362200.1 | 50S ribosome-binding GTPase | - |
| CYQ10_RS21780 () | 4204320..4205000 | + | 681 | WP_001282912.1 | WYL domain-containing protein | - |
| CYQ10_RS21790 () | 4205043..4206344 | + | 1302 | WP_061362201.1 | hypothetical protein | - |
| CYQ10_RS21795 () | 4206407..4206943 | + | 537 | WP_001000101.1 | DUF4234 domain-containing protein | - |
| CYQ10_RS21800 () | 4207019..4207240 | + | 222 | WP_061362202.1 | DUF905 family protein | - |
| CYQ10_RS21810 () | 4207331..4208149 | + | 819 | WP_061362203.1 | DUF945 domain-containing protein | - |
| CYQ10_RS21815 () | 4208226..4208711 | + | 486 | WP_053272402.1 | antirestriction protein | - |
| CYQ10_RS21820 () | 4208726..4209109 | + | 384 | Protein_3967 | hypothetical protein | - |
| CYQ10_RS21825 () | 4209100..4209888 | + | 789 | Protein_3968 | DUF4942 domain-containing protein | - |
| CYQ10_RS21835 () | 4209939..4210636 | + | 698 | Protein_3969 | IS1 family transposase IS1X2 | Transposase |
| CYQ10_RS21840 () | 4210733..4212268 | + | 1536 | WP_061362221.1 | Cyclic di-GMP phosphodiesterase PdeL | VF |
| CYQ10_RS21855 () | 4213071..4214609 | + | 1539 | WP_001187173.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| CYQ10_RS21860 () | 4214974..4216308 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| CYQ10_RS21865 () | 4216388..4218535 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| CYQ10_RS21870 () | 4218594..4220051 | + | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| CYQ10_RS21875 () | 4220288..4221805 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| CYQ10_RS21880 () | 4221924..4222097 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| CYQ10_RS21885 () | 4222125..4222421 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| CYQ10_RS21895 () | 4222648..4222920 | - | 273 | WP_000405651.1 | N-acetyltransferase | - |
| CYQ10_RS21900 () | 4222932..4223162 | - | 231 | WP_000371704.1 | (4Fe-4S)-binding protein | - |
| CYQ10_RS21905 () | 4223343..4224974 | + | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| CYQ10_RS21910 () | 4224971..4225690 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|