MGE detailed information
MGE type: Genomic_island MGE length: 79203 bp
Accession: NZ_CP026935 Location: 4516464..4595666 Organism: Escherichia coli strain CFS3292 Replicon: chromosome
Accession: NZ_CP026935 Location: 4516464..4595666 Organism: Escherichia coli strain CFS3292 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C5F72_RS22195 () | 4512798..4514300 | - | 1503 | WP_021543393.1 | phosphoethanolamine transferase | - |
| C5F72_RS22200 () | 4514482..4515210 | - | 729 | WP_021578734.1 | porin family protein | - |
| C5F72_RS22205 () | 4515428..4515796 | - | 369 | WP_001275820.1 | hypothetical protein | - |
| C5F72_RS22210 () | 4516028..4516258 | + | 231 | WP_074149372.1 | integrase | - |
| C5F72_RS22215 () | 4516464..4517292 | + | 829 | Protein_4351 | HNH endonuclease | - |
| C5F72_RS22220 () | 4517369..4517539 | - | 171 | Protein_4352 | 5'-nucleotidase | - |
| C5F72_RS22225 () | 4517543..4517906 | + | 364 | Protein_4353 | DDE-type integrase/transposase/recombinase | - |
| C5F72_RS22230 () | 4517947..4518927 | + | 981 | WP_000019445.1 | IS5-like element ISKpn26 family transposase | - |
| C5F72_RS22235 () | 4519075..4520074 | - | 1000 | Protein_4355 | transposase | - |
| C5F72_RS22240 () | 4520071..4520910 | - | 840 | WP_052321850.1 | OmpA family protein | - |
| C5F72_RS22245 () | 4520969..4522045 | - | 1077 | WP_077694634.1 | YadA-like family protein | - |
| C5F72_RS22250 () | 4522355..4523052 | + | 698 | Protein_4358 | IS1 family transposase | - |
| C5F72_RS22255 () | 4523203..4523625 | - | 423 | WP_157839822.1 | DDE-type integrase/transposase/recombinase | - |
| C5F72_RS22260 () | 4524215..4525426 | + | 1212 | WP_024248572.1 | autotransporter strand-loop-strand O-heptosyltransferase | - |
| C5F72_RS22265 () | 4525419..4528280 | + | 2862 | WP_159376044.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| C5F72_RS22270 () | 4528624..4528737 | + | 114 | Protein_4362 | IS110 family transposase | - |
| C5F72_RS22275 () | 4528769..4530382 | - | 1614 | WP_000080195.1 | IS66-like element ISEc23 family transposase | - |
| C5F72_RS22280 () | 4530413..4530763 | - | 351 | WP_000624722.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| C5F72_RS22285 () | 4530760..4531185 | - | 426 | WP_000422741.1 | IS66 family insertion sequence hypothetical protein | - |
| C5F72_RS22290 () | 4531356..4532894 | - | 1539 | WP_096145160.1 | IS66-like element ISEc8 family transposase | - |
| C5F72_RS22295 () | 4532944..4533290 | - | 347 | Protein_4367 | IS66 family insertion sequence element accessory protein TnpB | - |
| C5F72_RS22300 () | 4533512..4533655 | - | 144 | WP_197970451.1 | transposase | - |
| C5F72_RS22305 () | 4533694..4535250 | - | 1557 | WP_001066423.1 | IS66 family transposase | - |
| C5F72_RS22310 () | 4535270..4535617 | - | 348 | WP_000631725.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| C5F72_RS22315 () | 4535614..4536288 | - | 675 | WP_001341423.1 | IS66 family insertion sequence hypothetical protein | - |
| C5F72_RS22320 () | 4536303..4536692 | + | 390 | Protein_4372 | hypothetical protein | - |
| C5F72_RS22325 () | 4537215..4537511 | + | 297 | WP_021578747.1 | type 1 fimbrial protein | - |
| C5F72_RS22330 () | 4539552..4540780 | + | 1229 | WP_088895425.1 | IS3-like element IS2 family transposase | - |
| C5F72_RS22335 () | 4540952..4541395 | - | 444 | Protein_4375 | IS200/IS605-like element IS200C family transposase | - |
| C5F72_RS22340 () | 4542493..4543035 | - | 543 | Protein_4376 | ISL3 family transposase | - |
| C5F72_RS22345 () | 4543161..4543907 | - | 747 | WP_021578750.1 | porin family protein | - |
| C5F72_RS22350 () | 4544154..4544326 | + | 173 | Protein_4378 | transposase domain-containing protein | - |
| C5F72_RS22355 () | 4544465..4544715 | - | 251 | Protein_4379 | transposase | - |
| C5F72_RS22360 () | 4544720..4544899 | - | 180 | Protein_4380 | IS66 family insertion sequence element accessory protein TnpB | - |
| C5F72_RS22365 () | 4544989..4545768 | - | 780 | WP_021578751.1 | OmpA family protein | - |
| C5F72_RS22370 () | 4545789..4549226 | - | 3438 | WP_159376045.1 | YadA-like family protein | - |
| C5F72_RS22375 () | 4550626..4550865 | + | 240 | WP_021578753.1 | hypothetical protein | - |
| C5F72_RS22380 () | 4551714..4552394 | + | 681 | WP_157925225.1 | helix-turn-helix domain-containing protein | - |
| C5F72_RS22385 () | 4552804..4553160 | - | 357 | WP_097707835.1 | PerC family transcriptional regulator | - |
| C5F72_RS22390 () | 4553145..4553783 | - | 639 | WP_016232891.1 | ParB/RepB/Spo0J family partition protein | - |
| C5F72_RS22395 () | 4553768..4554997 | - | 1230 | WP_097707836.1 | phosphoadenosine phosphosulfate reductase | - |
| C5F72_RS22400 () | 4555241..4555975 | - | 735 | WP_097707837.1 | AraC family transcriptional regulator | - |
| C5F72_RS22405 () | 4556131..4556703 | - | 573 | WP_001315613.1 | YfdX family protein | - |
| C5F72_RS22410 () | 4557535..4559106 | - | 1572 | WP_021572172.1 | IS66 family transposase | - |
| C5F72_RS22415 () | 4559126..4559473 | - | 348 | WP_000624622.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| C5F72_RS22420 () | 4559473..4560149 | - | 677 | Protein_4392 | transposase | - |
| C5F72_RS22425 () | 4560344..4560535 | - | 192 | WP_001279435.1 | hypothetical protein | - |
| C5F72_RS22430 () | 4560648..4561682 | - | 1035 | WP_159376046.1 | F17G fimbrial adhesin | - |
| C5F72_RS22435 () | 4561684..4564152 | - | 2469 | WP_137427054.1 | fimbrial biogenesis outer membrane usher protein | - |
| C5F72_RS22440 () | 4564236..4564958 | - | 723 | WP_000680559.1 | fimbria/pilus periplasmic chaperone | - |
| C5F72_RS22445 () | 4565028..4565567 | - | 540 | WP_047664276.1 | fimbrial protein | - |
| C5F72_RS22450 () | 4566651..4568222 | - | 1572 | WP_151074827.1 | IS66 family transposase | - |
| C5F72_RS22455 () | 4568242..4568589 | - | 348 | WP_000624622.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| C5F72_RS22460 () | 4568589..4569239 | - | 651 | WP_128457784.1 | IS66-like element accessory protein TnpA | - |
| C5F72_RS22465 () | 4569892..4571211 | + | 1320 | WP_137427057.1 | MFS transporter family glucose-6-phosphate receptor UhpC | - |
| C5F72_RS22470 () | 4571639..4571878 | - | 240 | Protein_4402 | transposase | - |
| C5F72_RS22475 () | 4571882..4572862 | - | 981 | WP_159376047.1 | IS110 family transposase | - |
| C5F72_RS22480 () | 4573167..4574192 | + | 1026 | WP_097707938.1 | HoxN/HupN/NixA family nickel/cobalt transporter | - |
| C5F72_RS22485 () | 4574266..4574852 | + | 587 | Protein_4405 | YcxB family protein | - |
| C5F72_RS22490 () | 4575257..4575430 | - | 174 | Protein_4406 | transposase domain-containing protein | - |
| C5F72_RS22495 () | 4575682..4575966 | + | 285 | WP_096848713.1 | hypothetical protein | - |
| C5F72_RS22500 () | 4576010..4576306 | + | 297 | WP_096936272.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| C5F72_RS22505 () | 4576334..4576507 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| C5F72_RS22510 () | 4576626..4578143 | - | 1518 | WP_137427006.1 | lysine--tRNA ligase | - |
| C5F72_RS22515 () | 4578458..4580605 | - | 2148 | WP_137426808.1 | lysine decarboxylase CadA | - |
| C5F72_RS22520 () | 4580621..4581952 | - | 1332 | WP_096848882.1 | putrescine-ornithine antiporter | - |
| C5F72_RS22525 () | 4582047..4584203 | - | 2157 | WP_137426806.1 | ornithine decarboxylase SpeF | - |
| C5F72_RS22530 () | 4584957..4585236 | - | 280 | Protein_4414 | filamentous hemagglutinin | - |
| C5F72_RS22535 () | 4585286..4585645 | - | 360 | WP_097707926.1 | DUF596 domain-containing protein | - |
| C5F72_RS22540 () | 4585794..4587329 | + | 1536 | Protein_4416 | IS3 family transposase | - |
| C5F72_RS22545 () | 4587375..4588227 | - | 853 | Protein_4417 | VENN motif pre-toxin domain-containing protein | - |
| C5F72_RS22550 () | 4588445..4588984 | - | 540 | WP_040074745.1 | hypothetical protein | - |
| C5F72_RS22555 () | 4588984..4590021 | - | 1038 | Protein_4419 | VENN motif pre-toxin domain-containing protein | - |
| C5F72_RS22560 () | 4590024..4590137 | - | 114 | Protein_4420 | IS66 family insertion sequence element accessory protein TnpB | - |
| C5F72_RS22565 () | 4590328..4590666 | - | 339 | WP_001003690.1 | hypothetical protein | - |
| C5F72_RS22570 () | 4590663..4591499 | - | 837 | WP_047668322.1 | DNA/RNA non-specific endonuclease | - |
| C5F72_RS22575 () | 4591578..4591829 | - | 252 | Protein_4423 | VENN motif pre-toxin domain-containing protein | - |
| C5F72_RS22580 () | 4591876..4592397 | - | 522 | WP_137426804.1 | DUF2569 domain-containing protein | - |
| C5F72_RS22585 () | 4592715..4593412 | - | 698 | Protein_4425 | IS1 family transposase | - |
| C5F72_RS22590 () | 4593441..4593713 | - | 273 | WP_159376048.1 | hypothetical protein | - |
| C5F72_RS22595 () | 4593682..4594290 | - | 609 | WP_052318785.1 | hypothetical protein | - |
| C5F72_RS22600 () | 4594514..4594771 | - | 258 | WP_000877779.1 | hypothetical protein | - |
| C5F72_RS22605 () | 4594768..4595373 | - | 606 | WP_001449588.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|