MGE detailed information
MGE type: Prophage MGE length: 30680 bp
Accession: NZ_CP026846 Location: 1738436..1769115 Organism: Shigella boydii strain 59-2708 Replicon: chromosome
Accession: NZ_CP026846 Location: 1738436..1769115 Organism: Shigella boydii strain 59-2708 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P57_RS08565 (1734400) | 1734400..1735758 | + | 1359 | Protein_1662 | anion permease | - |
| C1P57_RS08570 (1735941) | 1735941..1738202 | + | 2262 | WP_134795647.1 | hydratase | - |
| C1P57_RS08575 (1738436) | 1738436..1739719 | - | 1284 | WP_078166422.1 | putative acyl-CoA thioester hydrolase | - |
| C1P57_RS08580 (1739853) | 1739853..1740791 | - | 939 | Protein_1665 | tyrosine-type recombinase/integrase | - |
| C1P57_RS08590 (1742039) | 1742039..1742134 | - | 96 | WP_284522451.1 | host nuclease inhibitor GamL | - |
| C1P57_RS08595 (1742155) | 1742155..1742436 | - | 282 | WP_000934193.1 | hypothetical protein | - |
| C1P57_RS08605 (1742731) | 1742731..1743621 | - | 891 | WP_078167383.1 | Rha family phage regulatory protein | - |
| C1P57_RS08610 (1744276) | 1744276..1744524 | + | 249 | WP_000513533.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| C1P57_RS08615 (1744521) | 1744521..1744865 | + | 345 | WP_001016018.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| C1P57_RS24705 (1744980) | 1744980..1745150 | - | 171 | WP_164834428.1 | hypothetical protein | - |
| C1P57_RS08620 (1745272) | 1745272..1745990 | - | 719 | Protein_1673 | LexA family transcriptional regulator | - |
| C1P57_RS08625 (1746096) | 1746096..1746335 | + | 240 | WP_000171144.1 | helix-turn-helix transcriptional regulator | - |
| C1P57_RS25185 (1746382) | 1746382..1746639 | + | 258 | Protein_1675 | hypothetical protein | - |
| C1P57_RS08635 (1746861) | 1746861..1747067 | + | 207 | WP_284522452.1 | hypothetical protein | - |
| C1P57_RS08640 (1747124) | 1747124..1747746 | + | 623 | Protein_1677 | IS3-like element IS911 family transposase | - |
| C1P57_RS08645 (1747741) | 1747741..1748416 | + | 676 | Protein_1678 | putative HTH-type transcriptional regulator RhmR | VF |
| C1P57_RS08650 (1748431) | 1748431..1749636 | + | 1206 | WP_000174592.1 | L-rhamnonate dehydratase | - |
| C1P57_RS08655 (1749693) | 1749693..1750981 | + | 1289 | Protein_1680 | MFS transporter | - |
| C1P57_RS08660 (1750999) | 1750999..1751802 | + | 804 | WP_000992988.1 | 2-keto-3-deoxy-L-rhamnonate aldolase | - |
| C1P57_RS08665 (1751843) | 1751843..1752805 | - | 963 | WP_000140573.1 | Recombination-promoting nuclease RpnA | VF |
| C1P57_RS08670 (1752998) | 1752998..1754188 | - | 1191 | WP_001000371.1 | anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC | - |
| C1P57_RS08675 (1754185) | 1754185..1755444 | - | 1260 | WP_001209885.1 | glycerol-3-phosphate dehydrogenase subunit GlpB | - |
| C1P57_RS08680 (1755434) | 1755434..1757062 | - | 1629 | WP_000857259.1 | anaerobic glycerol-3-phosphate dehydrogenase subunit A | - |
| C1P57_RS08685 (1757335) | 1757335..1758693 | + | 1359 | WP_000948704.1 | glycerol-3-phosphate transporter | - |
| C1P57_RS08690 (1758698) | 1758698..1759774 | + | 1077 | WP_000772513.1 | glycerophosphodiester phosphodiesterase | - |
| C1P57_RS08695 (1759816) | 1759816..1760058 | - | 243 | Protein_1688 | LysR family transcriptional regulator | - |
| C1P57_RS25190 (1760053) | 1760053..1760157 | + | 105 | Protein_1689 | hypothetical protein | - |
| C1P57_RS08700 (1760237) | 1760237..1760887 | + | 651 | WP_078167132.1 | lipopolysaccharide kinase InaA | - |
| C1P57_RS08705 (1760941) | 1760941..1761195 | - | 255 | WP_000135037.1 | ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein YfaE | - |
| C1P57_RS08710 (1761195) | 1761195..1762325 | - | 1131 | WP_004990731.1 | class Ia ribonucleoside-diphosphate reductase subunit beta | - |
| C1P57_RS25195 (1762324) | 1762324..1762359 | + | 36 | Protein_1693 | hypothetical protein | - |
| C1P57_RS08715 (1762559) | 1762559..1764844 | - | 2286 | WP_078167131.1 | class 1a ribonucleoside-diphosphate reductase subunit alpha | - |
| C1P57_RS25570 (1764972) | 1764972..1765115 | + | 144 | WP_001300064.1 | protein YpaB | - |
| C1P57_RS08720 (1765540) | 1765540..1769115 | + | 3576 | Protein_1696 | AIDA-I family autotransporter adhesin YfaL/EhaC | - |
| C1P57_RS08725 (1769256) | 1769256..1769978 | - | 723 | WP_000990758.1 | bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG | - |
| C1P57_RS08730 (1770125) | 1770125..1772752 | + | 2628 | WP_001281263.1 | DNA topoisomerase (ATP-hydrolyzing) subunit A | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|