MGE detailed information
MGE type: Prophage MGE length: 42102 bp
Accession: NZ_CP026792 Location: 2688631..2730732 Organism: Shigella flexneri strain 61-4982 Replicon: chromosome
Accession: NZ_CP026792 Location: 2688631..2730732 Organism: Shigella flexneri strain 61-4982 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P80_RS14095 () | 2686285..2687724 | + | 1440 | WP_000057029.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| C1P80_RS14100 () | 2687842..2688078 | + | 237 | WP_001295499.1 | DUF1480 family protein | - |
| C1P80_RS14105 () | 2688183..2688374 | + | 192 | WP_001296140.1 | YebW family protein | - |
| C1P80_RS14110 () | 2688399..2688587 | - | 189 | Protein_2601 | serine/threonine-protein phosphatase | - |
| C1P80_RS14120 () | 2689852..2690298 | - | 447 | Protein_2603 | metallophosphoesterase | - |
| C1P80_RS14130 () | 2691040..2692755 | + | 1716 | WP_128636480.1 | hypothetical protein | VF |
| C1P80_RS14140 () | 2692935..2693558 | - | 624 | WP_000930142.1 | DUF4376 domain-containing protein | - |
| C1P80_RS24495 () | 2693509..2693676 | - | 168 | Protein_2606 | IS66 family transposase ISSfl3 | Transposase |
| C1P80_RS24500 () | 2693678..2694058 | - | 381 | Protein_2607 | IS66 family transposase ISSfl3 | Transposase |
| C1P80_RS14155 () | 2695373..2695609 | - | 237 | WP_001275006.1 | hypothetical protein | - |
| C1P80_RS14160 () | 2696086..2696974 | + | 889 | Protein_2610 | Rha family transcriptional regulator | - |
| C1P80_RS14165 () | 2697016..2698244 | + | 1229 | WP_171763930.1 | IS3 family transposase IS2 | Transposase |
| C1P80_RS14170 () | 2698321..2698542 | + | 222 | WP_000560226.1 | killing protein KilR | - |
| C1P80_RS14175 () | 2698536..2698712 | + | 177 | WP_000245528.1 | hypothetical protein | - |
| C1P80_RS14180 () | 2698787..2699059 | + | 273 | WP_024260426.1 | hypothetical protein | - |
| C1P80_RS14185 () | 2699088..2699785 | + | 698 | Protein_2615 | IS1 family transposase IS1X2 | Transposase |
| C1P80_RS14190 () | 2699938..2701353 | + | 1416 | Protein_2616 | exodeoxyribonuclease VIII | - |
| C1P80_RS14200 () | 2702665..2702880 | + | 216 | Protein_2618 | host-nuclease inhibitor protein Gam | - |
| C1P80_RS14205 () | 2702954..2704122 | + | 1169 | WP_000747032.1 | IS3 family transposase ISLad1 | Transposase |
| C1P80_RS14210 () | 2704183..2705294 | + | 1112 | Protein_2620 | AAA family ATPase | - |
| C1P80_RS14215 () | 2705369..2706423 | + | 1055 | Protein_2621 | IS3 family transposase IS629 | Transposase |
| C1P80_RS14220 () | 2706471..2706638 | + | 168 | WP_005049823.1 | excisionase family protein | - |
| C1P80_RS14225 () | 2706640..2706810 | + | 171 | Protein_2623 | DUF3596 domain-containing protein | - |
| C1P80_RS14230 () | 2706827..2707524 | - | 698 | Protein_2624 | IS1 family transposase IS1X2 | Transposase |
| C1P80_RS14235 () | 2707614..2708219 | + | 606 | WP_000443257.1 | Ferrienterobactin-binding periplasmic protein ; Integrase | Integrase |
| C1P80_RS14240 () | 2708681..2709595 | + | 915 | WP_000555620.1 | Enterobactin exporter EntS | VF |
| C1P80_RS14245 () | 2709595..2710422 | + | 828 | WP_000983722.1 | Ferric enterobactin transport system permease protein FepD | VF |
| C1P80_RS14250 () | 2710419..2711276 | + | 858 | WP_001101728.1 | Ferric enterobactin transport system permease protein FepG | ARG |
| C1P80_RS14255 () | 2711273..2712130 | + | 858 | WP_000968134.1 | Ferric enterobactin transport ATP-binding protein FepC | ARG |
| C1P80_RS14260 () | 2712331..2712954 | - | 624 | WP_000930141.1 | DUF4376 domain-containing protein | - |
| C1P80_RS14265 () | 2712905..2714090 | - | 1186 | Protein_2631 | prophage tail fiber N-terminal domain-containing protein | - |
| C1P80_RS14270 () | 2714114..2714658 | - | 545 | Protein_2632 | tail fiber assembly protein | - |
| C1P80_RS24505 () | 2714682..2715050 | - | 369 | WP_011069357.1 | hypothetical protein | - |
| C1P80_RS14285 () | 2715078..2715983 | - | 906 | Protein_2634 | IS3 family transposase IS600 | Transposase |
| C1P80_RS14290 () | 2715999..2716696 | - | 698 | Protein_2635 | IS1 family transposase IS1X2 | Transposase |
| C1P80_RS14295 () | 2716725..2716925 | - | 201 | WP_000082752.1 | Rha family transcriptional regulator | - |
| C1P80_RS14300 () | 2717809..2719413 | - | 1605 | WP_025745148.1 | 1,4-dihydroxy-2-naphthoyl-CoA hydrolase ; Integrase | Integrase |
| C1P80_RS14330 () | 2720047..2720553 | - | 507 | WP_045178261.1 | ORF6N domain-containing protein | - |
| C1P80_RS14340 () | 2721818..2722003 | - | 186 | WP_005049799.1 | hypothetical protein | - |
| C1P80_RS14345 () | 2722144..2722698 | - | 555 | WP_000640143.1 | DUF1133 family protein | - |
| C1P80_RS14350 () | 2722695..2722985 | - | 291 | WP_000228038.1 | DUF1364 domain-containing protein | - |
| C1P80_RS14355 () | 2722985..2723584 | - | 600 | WP_000940329.1 | DUF1367 family protein | - |
| C1P80_RS14360 () | 2723718..2724415 | + | 698 | Protein_2644 | IS1 family transposase IS1X2 | Transposase |
| C1P80_RS14370 () | 2724921..2725076 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| - () | 2725088..2725146 | + | 59 | - | - | Antitoxin Detail |
| C1P80_RS14375 () | 2725531..2725896 | - | 366 | WP_000610655.1 | DUF551 domain-containing protein | - |
| C1P80_RS14380 () | 2725896..2726561 | - | 666 | WP_000208062.1 | hypothetical protein | - |
| C1P80_RS14385 () | 2726558..2726923 | - | 366 | WP_001229298.1 | HNH endonuclease | - |
| C1P80_RS14390 () | 2726925..2727143 | - | 219 | WP_000256998.1 | DUF4014 family protein | - |
| C1P80_RS14395 () | 2727236..2727592 | - | 357 | WP_005048249.1 | hypothetical protein | - |
| C1P80_RS14400 () | 2727650..2728072 | - | 423 | WP_001118167.1 | DUF977 family protein | - |
| C1P80_RS14405 () | 2728087..2728833 | - | 747 | WP_000788996.1 | ATP-binding protein | - |
| C1P80_RS24510 () | 2729326..2729580 | - | 255 | Protein_2653 | hypothetical protein | - |
| C1P80_RS14415 () | 2729627..2730684 | + | 1058 | Protein_2654 | IS3 family transposase IS2 | Transposase |
| C1P80_RS14420 () | 2730711..2731907 | - | 1197 | WP_005107451.1 | IS110 family transposase | - |
| C1P80_RS14425 () | 2732136..2732717 | + | 582 | Protein_2656 | alpha/beta hydrolase | - |
| C1P80_RS14430 () | 2732735..2733373 | + | 639 | WP_005049763.1 | SDR family oxidoreductase | - |
| C1P80_RS14435 () | 2733664..2734392 | + | 729 | WP_005061999.1 | murein tripeptide amidase MpaA | - |
| C1P80_RS14440 () | 2734367..2735332 | - | 966 | WP_005049759.1 | L-Ala-D/L-Glu epimerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|