MGE detailed information
MGE type: Prophage MGE length: 58147 bp
Accession: NZ_CP026792 Location: 2035850..2093996 Organism: Shigella flexneri strain 61-4982 Replicon: chromosome
Accession: NZ_CP026792 Location: 2035850..2093996 Organism: Shigella flexneri strain 61-4982 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P80_RS10430 () | 2030905..2031729 | + | 825 | WP_000754740.1 | SDR family oxidoreductase | - |
| C1P80_RS10435 () | 2031775..2032758 | + | 984 | WP_000803326.1 | LysR family transcriptional regulator | - |
| C1P80_RS10440 () | 2032919..2032981 | + | 63 | WP_097433929.1 | membrane protein YoeI | - |
| C1P80_RS10445 () | 2032971..2034329 | + | 1359 | WP_000019203.1 | putrescine/proton symporter PlaP | - |
| C1P80_RS10450 () | 2034508..2035566 | + | 1059 | WP_000492293.1 | transport protein YeeE | - |
| C1P80_RS10455 () | 2035580..2035807 | + | 228 | WP_000985273.1 | sulfurtransferase TusA family protein | - |
| C1P80_RS10460 () | 2035850..2037274 | - | 1425 | WP_000132548.1 | exodeoxyribonuclease I | - |
| C1P80_RS10465 () | 2037456..2038292 | + | 837 | Protein_1925 | Aminodeoxychorismate synthase component 1 ; Integrase | Integrase |
| C1P80_RS10475 () | 2038374..2039048 | + | 675 | WP_004967157.1 | IS66 family transposase ISSfl3 | Transposase |
| C1P80_RS10480 () | 2039045..2039215 | + | 171 | Protein_1927 | IS66 family transposase ISSfl3 | Transposase |
| C1P80_RS10485 () | 2039260..2040455 | - | 1196 | Protein_1928 | IS3 family transposase | - |
| C1P80_RS24460 () | 2040511..2040690 | + | 180 | Protein_1929 | IS66 family insertion sequence element accessory protein TnpB | - |
| C1P80_RS10495 () | 2040687..2042288 | + | 1602 | WP_011110603.1 | IS66 family transposase ISSfl3 | Transposase |
| C1P80_RS10500 () | 2042322..2042708 | + | 387 | Protein_1931 | IS3 family transposase ISLad1 | Transposase |
| C1P80_RS10510 () | 2042760..2043113 | - | 354 | Protein_1932 | Cell division topological specificity factor ; Integrase | Integrase |
| C1P80_RS10515 () | 2043143..2043559 | - | 417 | Protein_1933 | IS66 family transposase ISSfl3 | Transposase |
| C1P80_RS10530 () | 2044824..2045111 | - | 288 | Protein_1935 | transposase | - |
| C1P80_RS10540 () | 2046441..2047346 | - | 906 | Protein_1937 | IS66 family transposase ISSfl3 | Transposase |
| C1P80_RS10545 () | 2047343..2047693 | - | 351 | WP_005049241.1 | IS66 family transposase ISSfl3 | Transposase |
| C1P80_RS10550 () | 2047690..2048364 | - | 675 | WP_004967157.1 | IS66 family transposase ISSfl3 | Transposase |
| C1P80_RS10555 () | 2048434..2048733 | + | 300 | WP_005088730.1 | hypothetical protein | - |
| C1P80_RS10560 () | 2048905..2049234 | + | 330 | WP_005107963.1 | DUF496 family protein | - |
| C1P80_RS10565 () | 2049335..2049517 | - | 183 | WP_001016348.1 | hypothetical protein | - |
| C1P80_RS10570 () | 2049571..2049717 | + | 147 | Protein_1943 | transposase domain-containing protein | - |
| C1P80_RS10575 () | 2050095..2051290 | - | 1196 | Protein_1944 | IS3 family transposase | - |
| C1P80_RS10585 () | 2051533..2052689 | + | 1157 | WP_134798384.1 | IS3 family transposase IS600 | Transposase |
| C1P80_RS10595 () | 2052701..2053210 | + | 510 | WP_000261572.1 | bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | - |
| C1P80_RS10600 () | 2053207..2053950 | + | 744 | WP_005049317.1 | adenosylcobinamide-GDP ribazoletransferase | - |
| C1P80_RS10605 () | 2053962..2055041 | + | 1080 | WP_001165576.1 | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | - |
| C1P80_RS10610 () | 2055103..2056038 | + | 936 | WP_000986346.1 | L,D-transpeptidase | - |
| C1P80_RS10620 () | 2056497..2057414 | + | 918 | WP_001011445.1 | nitrogen assimilation transcriptional regulator NAC | - |
| C1P80_RS10625 () | 2057516..2058466 | + | 951 | WP_001010988.1 | HTH-type transcriptional regulator Cbl | - |
| C1P80_RS10635 () | 2058584..2060211 | + | 1628 | Protein_1952 | toxic metabolite efflux MATE transporter YeeO | - |
| C1P80_RS10645 () | 2060843..2061559 | - | 717 | WP_000532920.1 | ECF RNA polymerase sigma factor EcfG | VF |
| C1P80_RS10650 () | 2061902..2063356 | - | 1455 | WP_001060217.1 | AMP nucleosidase | - |
| C1P80_RS10655 () | 2063458..2063664 | - | 207 | WP_000466573.1 | hypothetical protein | - |
| C1P80_RS10665 () | 2064926..2065429 | - | 504 | WP_005063096.1 | MFS transporter | - |
| C1P80_RS10670 () | 2065491..2066659 | + | 1169 | Protein_1958 | IS3 family transposase ISLad1 | Transposase |
| C1P80_RS10675 () | 2066766..2068028 | - | 1263 | Protein_1959 | Ribosome-binding ATPase YchF ; Integrase | Integrase |
| C1P80_RS10685 () | 2068366..2069163 | - | 798 | WP_001325918.1 | DgsA anti-repressor MtfA | - |
| C1P80_RS10695 () | 2069399..2070424 | - | 1026 | WP_000533619.1 | HTH-type transcriptional regulator PgrR ; Integrase | Integrase |
| C1P80_RS10700 () | 2070424..2070564 | - | 141 | Protein_1962 | DUF4224 domain-containing protein | - |
| C1P80_RS10705 () | 2070591..2071007 | + | 417 | WP_005069274.1 | hypothetical protein | - |
| - () | 2071589..2071647 | - | 59 | - | - | Antitoxin Detail |
| C1P80_RS10720 () | 2071659..2071814 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| C1P80_RS10730 () | 2071982..2072260 | + | 279 | WP_011069426.1 | hypothetical protein | - |
| C1P80_RS10735 () | 2072262..2073320 | + | 1059 | WP_001265248.1 | DUF968 domain-containing protein | - |
| C1P80_RS10740 () | 2073321..2073686 | + | 366 | WP_000140020.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C1P80_RS10745 () | 2073683..2074366 | + | 684 | WP_005049343.1 | antiterminator | - |
| C1P80_RS10775 () | 2075167..2075382 | + | 216 | WP_000839572.1 | class II holin family protein | - |
| C1P80_RS10780 () | 2075481..2075672 | + | 192 | Protein_1970 | IS66 family transposase ISSfl3 | Transposase |
| C1P80_RS10785 () | 2075684..2076381 | - | 698 | Protein_1971 | IS1 family transposase IS1X2 | Transposase |
| C1P80_RS10790 () | 2076439..2077296 | + | 858 | Protein_1972 | IS3 family transposase ISSd1 | Transposase |
| C1P80_RS10795 () | 2077337..2077816 | + | 480 | Protein_1973 | DUF4376 domain-containing protein | - |
| C1P80_RS10805 () | 2077996..2079639 | - | 1644 | WP_011110600.1 | NAD(P) transhydrogenase subunit beta | VF |
| C1P80_RS10810 () | 2079955..2080623 | - | 669 | WP_000239881.1 | class I SAM-dependent methyltransferase | - |
| C1P80_RS10815 () | 2080680..2080949 | + | 270 | WP_000937511.1 | tail fiber assembly protein | - |
| C1P80_RS10825 () | 2082027..2082677 | - | 651 | WP_001007781.1 | metal-binding protein ZinT | - |
| C1P80_RS10830 () | 2082935..2083570 | - | 636 | WP_001240061.1 | protein-methionine-sulfoxide reductase heme-binding subunit MsrQ | - |
| C1P80_RS10835 () | 2083571..2084575 | - | 1005 | Protein_1979 | protein-methionine-sulfoxide reductase catalytic subunit MsrP | - |
| C1P80_RS10840 () | 2084684..2085097 | - | 414 | WP_000920127.1 | hydroxyisourate hydrolase | - |
| C1P80_RS10845 () | 2085230..2085901 | + | 672 | WP_001347103.1 | Phenolic acid decarboxylase PadC | VF |
| C1P80_RS10850 () | 2085901..2086848 | + | 948 | Protein_1982 | two-component system sensor histidine kinase HprS | - |
| C1P80_RS10855 () | 2086860..2087557 | - | 698 | Protein_1983 | IS1 family transposase IS1X2 | Transposase |
| C1P80_RS10860 () | 2088185..2088364 | - | 180 | Protein_1984 | porin | - |
| C1P80_RS10865 () | 2088458..2089686 | + | 1229 | WP_111778310.1 | IS3 family transposase IS2 | Transposase |
| C1P80_RS10870 () | 2089695..2090459 | - | 765 | Protein_1986 | porin | - |
| C1P80_RS10875 () | 2090525..2091673 | + | 1149 | WP_134798385.1 | IS3 family transposase ISEhe3 | Transposase |
| C1P80_RS10880 () | 2091674..2091931 | + | 258 | WP_032155863.1 | hypothetical protein | - |
| C1P80_RS10885 () | 2091971..2092511 | + | 541 | Protein_1989 | phosphohydrolase | - |
| C1P80_RS10890 () | 2092578..2093996 | + | 1419 | WP_001157215.1 | DNA-cytosine methyltransferase | - |
| C1P80_RS10895 () | 2093977..2094447 | + | 471 | WP_000228688.1 | VSPR family DNA mismatch endonuclease | - |
| C1P80_RS10900 () | 2094436..2095356 | - | 921 | WP_001212270.1 | drug/metabolite exporter YedA | - |
| C1P80_RS10905 () | 2095529..2096446 | + | 918 | WP_000922688.1 | DUF808 domain-containing protein | - |
| C1P80_RS10910 () | 2096525..2096707 | + | 183 | WP_000009302.1 | DUF2158 domain-containing protein | - |
| C1P80_RS10915 () | 2096878..2098572 | + | 1695 | Protein_1995 | cellulose biosynthesis regulator YedQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|