MGE detailed information
MGE type: IScluster/Tn MGE length: 27304 bp
Accession: NZ_CP026771 Location: 12316..39619 Organism: Shigella flexneri Y strain 93-3063 Replicon: plasmid unnamed3
Accession: NZ_CP026771 Location: 12316..39619 Organism: Shigella flexneri Y strain 93-3063 Replicon: plasmid unnamed3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P87_RS24385 | 7855..8091 | + | 237 | WP_000588813.1 | phosphopantetheine-binding protein | - |
| C1P87_RS24390 | 8308..9237 | + | 930 | WP_000227976.1 | virulence regulon transcriptional activator VirB | - |
| C1P87_RS24395 | 10184..10963 | - | 780 | WP_005059304.1 | type III secretion system effector cysteine protease IpaJ | - |
| C1P87_RS27130 | 11160..11969 | - | 810 | Protein_11 | IS110 family transposase | - |
| C1P87_RS24400 | 12316..13320 | + | 1005 | WP_134798316.1 | IS21 family transposase IS100kyp | Transposase |
| C1P87_RS24405 | 13512..14708 | + | 1197 | WP_134798317.1 | IS110 family transposase ISSfl4 | Transposase |
| C1P87_RS24410 | 14758..15595 | - | 838 | Protein_14 | IS21 family transposase ISEc62 | Transposase |
| C1P87_RS27135 | 15578..15919 | - | 342 | Protein_15 | IS21 family transposase ISEc62 | Transposase |
| C1P87_RS24415 | 16034..16837 | - | 804 | Protein_16 | IS3 family transposase ISKpn38 | Transposase |
| C1P87_RS24420 | 16878..17942 | - | 1065 | Protein_17 | IS3 family transposase IS600 | Transposase |
| C1P87_RS24430 | 18280..19734 | - | 1455 | WP_094169927.1 | hypothetical protein | VF |
| C1P87_RS24435 | 20306..20980 | + | 675 | WP_001088287.1 | IS66 family transposase ISSfl3 | Transposase |
| C1P87_RS24440 | 20977..21327 | + | 351 | WP_005048975.1 | IS66 family transposase ISSfl3 | Transposase |
| C1P87_RS24445 | 21324..22925 | + | 1602 | WP_134798250.1 | IS66 family transposase ISSfl3 | Transposase |
| C1P87_RS26405 | 23179..23343 | - | 165 | WP_001346193.1 | hypothetical protein | - |
| C1P87_RS24470 | 24245..24529 | + | 285 | WP_011114751.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| C1P87_RS24475 | 24517..25002 | + | 486 | WP_000501974.1 | GNAT family N-acetyltransferase | Toxin Detail |
| C1P87_RS24480 | 25175..25456 | - | 282 | Protein_25 | IS4 family transposase ISSfl1 | Transposase |
| C1P87_RS24485 | 25523..26679 | + | 1157 | Protein_26 | IS3 family transposase IS600 | Transposase |
| C1P87_RS24490 | 26794..28022 | + | 1229 | WP_094081542.1 | IS3 family transposase IS2 | Transposase |
| C1P87_RS24495 | 28241..29932 | + | 1692 | WP_134796984.1 | putative E3 ubiquitin-protein ligase ipaH7.8 | VF |
| C1P87_RS24500 | 29984..31193 | + | 1210 | Protein_29 | IS3 family transposase | - |
| C1P87_RS24505 | 31236..31759 | - | 524 | Protein_30 | IS3 family transposase ISSfl11 | Transposase |
| C1P87_RS24510 | 31827..32309 | - | 483 | WP_000405245.1 | GNAT family N-acetyltransferase | Toxin Detail |
| C1P87_RS24515 | 32300..32602 | - | 303 | WP_010921625.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| C1P87_RS24525 | 32874..33146 | + | 273 | WP_000019158.1 | hypothetical protein | - |
| C1P87_RS24530 | 33127..34334 | + | 1208 | WP_134798318.1 | IS91 family transposase ISSbo1 | Transposase |
| C1P87_RS25890 | 34506..34634 | + | 129 | Protein_35 | IS5 family transposase ISSfl7 | Transposase |
| C1P87_RS24545 | 34783..36237 | - | 1455 | WP_075332747.1 | hypothetical protein | VF |
| C1P87_RS27140 | 36554..36733 | - | 180 | WP_014526559.1 | hypothetical protein | - |
| C1P87_RS24550 | 36647..37260 | + | 614 | Protein_38 | IS1 family transposase IS1X2 | Transposase |
| C1P87_RS24555 | 37310..38519 | + | 1210 | Protein_39 | IS3 family transposase | - |
| C1P87_RS24560 | 38563..38973 | + | 411 | Protein_40 | IS66 family transposase ISEc47 | Transposase |
| C1P87_RS24565 | 39005..39619 | + | 615 | Protein_41 | IS21 family transposase ISEc10 | Transposase |
| C1P87_RS24570 | 39788..43882 | - | 4095 | WP_001034121.1 | serine protease autotransporter toxin SepA | - |
| C1P87_RS24580 | 44284..44472 | + | 189 | WP_000957853.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|