MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 27054 bp
Accession: NZ_CP026769 Location: 1..27054 Organism: Shigella flexneri Y strain 93-3063 Replicon: plasmid unnamed1
Accession: NZ_CP026769 Location: 1..27054 Organism: Shigella flexneri Y strain 93-3063 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P87_RS23665 | 377..595 | - | 219 | WP_240532962.1 | hypothetical protein | - |
| C1P87_RS26375 | 626..832 | - | 207 | WP_171764428.1 | DinQ-like type I toxin DqlB | - |
| C1P87_RS23670 | 1032..1289 | - | 258 | WP_021544331.1 | hypothetical protein | - |
| C1P87_RS23675 | 1382..1846 | - | 465 | WP_001293142.1 | H-NS family nucleoid-associated regulatory protein | - |
| C1P87_RS23680 | 1864..2070 | - | 207 | WP_000850859.1 | hemolysin expression modulator Hha | - |
| C1P87_RS23685 | 2067..4220 | - | 2154 | WP_001235750.1 | type IA DNA topoisomerase | - |
| C1P87_RS23690 | 4232..4819 | - | 588 | WP_000275457.1 | DUF6012 family protein | - |
| C1P87_RS23695 | 4846..5166 | - | 321 | WP_001020837.1 | hypothetical protein | - |
| C1P87_RS23700 | 5226..5630 | - | 405 | WP_001218544.1 | hypothetical protein | - |
| C1P87_RS23705 | 5646..6161 | - | 516 | WP_001218000.1 | thermonuclease family protein | - |
| C1P87_RS26380 | 6158..6592 | - | 435 | WP_000981210.1 | hypothetical protein | - |
| C1P87_RS23715 | 6674..6913 | - | 240 | WP_001290043.1 | hypothetical protein | - |
| C1P87_RS23720 | 6968..7273 | - | 306 | WP_000147047.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| C1P87_RS23725 | 7257..7679 | - | 423 | WP_001353737.1 | cag pathogenicity island Cag12 family protein | - |
| C1P87_RS23730 | 7688..9550 | - | 1863 | WP_000847107.1 | relaxosome-coupling protein TaxB | - |
| C1P87_RS23735 | 9537..10565 | - | 1029 | WP_001014667.1 | Type IV secretion system protein VirB11 | VF |
| C1P87_RS23740 | 10567..11676 | - | 1110 | WP_000131270.1 | Type IV secretion system protein virB10 | VF |
| C1P87_RS23745 | 11669..12577 | - | 909 | WP_001353735.1 | Type IV secretion system protein virB9 | VF |
| C1P87_RS23750 | 12574..13260 | - | 687 | WP_001290764.1 | Type IV secretion system protein virB8 | VF |
| C1P87_RS23770 | 13775..14869 | - | 1095 | WP_001353734.1 | type IV secretion system protein | - |
| C1P87_RS23775 | 14881..15597 | - | 717 | WP_000832281.1 | type IV secretion system protein | - |
| C1P87_RS23780 | 15609..18356 | - | 2748 | WP_000105980.1 | Type IV secretion system protein virB4 | VF |
| C1P87_RS23785 | 18375..18701 | - | 327 | WP_000008644.1 | Type IV secretion system protein virB2 | VF |
| C1P87_RS23790 | 18715..19335 | - | 621 | WP_000157549.1 | Type IV secretion system protein virB1 | VF |
| C1P87_RS23795 | 19692..19907 | - | 216 | WP_000760375.1 | EexN family lipoprotein | - |
| C1P87_RS23800 | 19904..20197 | - | 294 | WP_000134733.1 | sigma factor-like helix-turn-helix DNA-binding protein | - |
| C1P87_RS23805 | 20274..21503 | - | 1230 | WP_016231858.1 | hypothetical protein | Relaxase |
| C1P87_RS23810 | 21507..22010 | - | 504 | WP_000781814.1 | relaxosome-coupling protein TaxA | - |
| C1P87_RS23820 | 22373..22720 | - | 348 | WP_000681613.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| C1P87_RS23825 | 22717..22965 | - | 249 | WP_000520549.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| C1P87_RS23830 | 23275..23568 | - | 294 | WP_001401669.1 | hypothetical protein | - |
| C1P87_RS23835 | 23583..23957 | - | 375 | WP_000844303.1 | tail-associated lysozyme | - |
| C1P87_RS23840 | 24009..24227 | - | 219 | WP_001407769.1 | hypothetical protein | - |
| C1P87_RS23850 | 24762..24989 | - | 228 | WP_000801440.1 | hypothetical protein | - |
| C1P87_RS23855 | 24979..25227 | - | 249 | WP_001230706.1 | hypothetical protein | - |
| C1P87_RS23860 | 25224..25766 | - | 543 | WP_001083906.1 | hypothetical protein | - |
| C1P87_RS23865 | 25871..26386 | - | 516 | WP_001025395.1 | J domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|