MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 32610 bp
Accession: NZ_CP026216 Location: 535630..568239 Organism: Citrobacter sp. CFNIH10 Replicon: chromosome
Accession: NZ_CP026216 Location: 535630..568239 Organism: Citrobacter sp. CFNIH10 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2U53_RS05815 () | 530667..532472 | - | 1806 | WP_099433660.1 | glycoside hydrolase family 2 | - |
| C2U53_RS05820 () | 532823..534130 | + | 1308 | WP_104445723.1 | MFS transporter | - |
| C2U53_RS05825 () | 534177..535298 | + | 1122 | WP_054177285.1 | hypothetical protein | - |
| C2U53_RS29860 () | 535270..535584 | - | 315 | WP_125339409.1 | hypothetical protein | - |
| C2U53_RS05830 () | 535847..537163 | + | 1317 | WP_045269869.1 | Prophage integrase IntA ; Integrase | Integrase |
| C2U53_RS05835 () | 537168..537782 | + | 615 | WP_000049639.1 | Fic family protein | - |
| C2U53_RS05840 () | 537779..537934 | - | 156 | WP_001225594.1 | hypothetical protein | - |
| C2U53_RS05845 () | 538063..538503 | + | 441 | WP_000459847.1 | hypothetical protein | - |
| C2U53_RS05850 () | 538848..539075 | + | 228 | WP_024209758.1 | AlpA family phage regulatory protein | - |
| C2U53_RS05855 () | 539191..540615 | + | 1425 | WP_000481743.1 | DUF3987 domain-containing protein | - |
| C2U53_RS05860 () | 540741..541367 | + | 627 | WP_023294607.1 | inovirus Gp2 family protein | - |
| C2U53_RS05865 () | 541440..541934 | - | 495 | WP_006809979.1 | hypothetical protein | - |
| C2U53_RS05870 () | 541969..545100 | - | 3132 | WP_045269868.1 | type I restriction endonuclease subunit R | - |
| C2U53_RS05880 () | 545269..546309 | - | 1041 | Protein_495 | restriction endonuclease subunit S | - |
| C2U53_RS05885 () | 546503..548212 | - | 1710 | WP_045269866.1 | type I restriction-modification system subunit M | - |
| C2U53_RS05890 () | 548481..548942 | - | 462 | WP_019077728.1 | GNAT family N-acetyltransferase | - |
| C2U53_RS05895 () | 549005..549607 | - | 603 | WP_001581470.1 | helix-turn-helix domain-containing protein | - |
| C2U53_RS05900 () | 549651..550346 | + | 696 | WP_001581469.1 | B3/4 domain-containing protein | - |
| C2U53_RS05905 () | 550367..550600 | + | 234 | Protein_500 | dihydrodipicolinate synthase family protein | - |
| C2U53_RS05910 () | 550750..551730 | - | 981 | WP_086550188.1 | IS5 family transposase ISKpn26 | Transposase |
| C2U53_RS05915 () | 552052..552660 | + | 609 | WP_002916128.1 | hypothetical protein | VF |
| C2U53_RS05920 () | 552756..553457 | + | 702 | WP_000820818.1 | putative fimbrial chaperone YadV | VF |
| C2U53_RS05925 () | 553469..555955 | + | 2487 | WP_045270032.1 | Outer membrane usher protein HtrE | VF |
| C2U53_RS05930 () | 555946..556941 | + | 996 | WP_045270033.1 | Fimbria adhesin protein | VF |
| C2U53_RS05935 () | 556955..557590 | + | 636 | WP_045270034.1 | hypothetical protein | VF |
| C2U53_RS05945 () | 557660..558357 | + | 698 | Protein_507 | IS1 family transposase IS1R | Transposase |
| C2U53_RS05950 () | 558553..559416 | + | 864 | WP_001548935.1 | GTPase family protein | - |
| C2U53_RS05955 () | 559508..560329 | + | 822 | WP_021574424.1 | DUF945 domain-containing protein | - |
| C2U53_RS05960 () | 560546..561247 | + | 702 | Protein_510 | WYL domain-containing protein | - |
| C2U53_RS05965 () | 561284..561520 | + | 237 | WP_001115854.1 | hypothetical protein | - |
| C2U53_RS05970 () | 561520..561963 | + | 444 | WP_058673475.1 | hypothetical protein | - |
| C2U53_RS05975 () | 561986..562453 | + | 468 | WP_058673476.1 | hypothetical protein | - |
| C2U53_RS05980 () | 562672..563826 | - | 1155 | WP_045268636.1 | UvrD-helicase domain-containing protein | - |
| C2U53_RS05985 () | 563819..565477 | - | 1659 | WP_045268637.1 | AAA family ATPase | - |
| C2U53_RS29865 () | 565866..566050 | + | 185 | Protein_516 | DUF905 family protein | - |
| C2U53_RS05990 () | 566152..566610 | + | 459 | WP_045268638.1 | antirestriction protein | - |
| C2U53_RS05995 () | 566626..567102 | + | 477 | WP_045268639.1 | RadC family protein | - |
| C2U53_RS06000 () | 567111..567332 | + | 222 | WP_007893437.1 | DUF987 domain-containing protein | - |
| C2U53_RS06005 () | 567352..567669 | + | 318 | WP_045268640.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| C2U53_RS06010 () | 567690..568031 | + | 342 | WP_045268641.1 | TA system toxin CbtA family protein | Toxin Detail |
| C2U53_RS06020 () | 568394..568900 | + | 507 | WP_044265577.1 | G/U mismatch-specific DNA glycosylase | - |
| C2U53_RS06025 () | 568948..570792 | - | 1845 | WP_042998197.1 | RNA polymerase sigma factor RpoD | - |
| C2U53_RS06030 () | 571026..572771 | - | 1746 | WP_044265580.1 | DNA primase | - |
| C2U53_RS06035 () | 573004..573219 | - | 216 | WP_001144069.1 | 30S ribosomal protein S21 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|