MGE detailed information

MGE type: Non-Mobilizable plasmid        MGE length: 206855 bp
Accession: NZ_CP026049        Location: 1..206855         Organism: Raoultella planticola strain FDAARGOS_64       Replicon: plasmid unnamed2


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
MC50_RS27265 () 812..2767 - 1956 WP_040118411.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
MC50_RS27270 () 2767..3369 - 603 WP_162933671.1 type-F conjugative transfer system pilin assembly protein TrbC -
MC50_RS27275 () 3409..4398 - 990 WP_049268071.1 conjugal transfer pilus assembly protein TraU -
MC50_RS27280 () 4409..5038 - 630 WP_032716660.1 type-F conjugative transfer system protein TraW -
MC50_RS27285 () 5035..5427 - 393 WP_032716659.1 type-F conjugative transfer system protein TrbI -
MC50_RS27290 () 5427..8066 - 2640 WP_032716658.1 type IV secretion system protein TraC -
MC50_RS27295 () 8146..8541 - 396 WP_162933670.1 hypothetical protein -
MC50_RS27305 () 8912..9316 - 405 WP_040118414.1 hypothetical protein -
MC50_RS27310 () 9313..9534 - 222 WP_032732073.1 hypothetical protein -
MC50_RS27320 () 10016..10234 - 219 WP_040118438.1 hypothetical protein -
MC50_RS27325 () 10602..11171 - 570 WP_071889124.1 type IV conjugative transfer system lipoprotein TraV -
MC50_RS27330 () 11190..11396 - 207 WP_032700826.1 hypothetical protein -
MC50_RS27335 () 11377..11973 - 597 WP_119834738.1 TraP protein -
MC50_RS27340 () 11966..13384 - 1419 WP_040118415.1 conjugal transfer protein TraB -
MC50_RS27345 () 13384..14118 - 735 WP_040118416.1 type-F conjugative transfer system secretin TraK -
MC50_RS27350 () 14105..14671 - 567 WP_040118417.1 type IV conjugative transfer system protein TraE -
MC50_RS27355 () 14691..14996 - 306 WP_020323523.1 type IV conjugative transfer system protein TraL -
MC50_RS27360 () 15010..15378 - 369 WP_047665734.1 type IV conjugative transfer system pilin TraA -
MC50_RS27365 () 15440..15604 - 165 WP_032444506.1 TraY domain-containing protein -
MC50_RS27370 () 15782..16471 - 690 WP_071889125.1 hypothetical protein -
MC50_RS27375 () 16672..17061 - 390 WP_032700831.1 relaxosome protein TraM -
MC50_RS27380 () 17486..17965 + 480 WP_032716648.1 hypothetical protein VF
MC50_RS27385 () 18003..18533 - 531 WP_032716647.1 antirestriction protein -
MC50_RS27390 () 19218..19364 - 147 WP_032700834.1 hypothetical protein -
MC50_RS27395 () 19458..19805 - 348 WP_047665736.1 hypothetical protein -
MC50_RS27400 () 19831..19989 - 159 WP_162180130.1 hypothetical protein -
MC50_RS27405 () 20046..20321 - 276 WP_032700867.1 hypothetical protein -
MC50_RS27420 () 21140..21421 - 282 WP_004118961.1 helix-turn-helix transcriptional regulator -
MC50_RS27425 () 21402..21731 - 330 WP_004118963.1 type II toxin-antitoxin system RelE/ParE family toxin -
MC50_RS27435 () 22135..22863 - 729 WP_004118966.1 plasmid SOS inhibition protein A -
MC50_RS27440 () 22860..23291 - 432 WP_004118968.1 conjugation system SOS inhibitor PsiB -
MC50_RS27445 () 23335..25392 - 2058 WP_032700842.1 ParB/RepB/Spo0J family partition protein -
MC50_RS27450 () 25460..25693 - 234 WP_009654057.1 DUF905 domain-containing protein -
MC50_RS27455 () 25742..26290 - 549 WP_009654061.1 single-stranded DNA-binding protein -
MC50_RS27465 () 26629..26850 + 222 Protein_35 hypothetical protein -
MC50_RS27470 () 27124..27687 - 564 WP_032700843.1 methyltransferase -
MC50_RS27475 () 27736..29118 - 1383 WP_047665739.1 DUF3560 domain-containing protein -
MC50_RS27480 () 29169..29399 - 231 WP_032700845.1 hypothetical protein -
MC50_RS27485 () 29556..29695 - 140 Protein_39 single-stranded DNA-binding protein -
MC50_RS27490 () 29872..30081 + 210 Protein_40 hypothetical protein -
MC50_RS27495 () 30192..30437 - 246 WP_074172513.1 DNA polymerase III subunit theta -
MC50_RS27500 () 30623..30814 - 192 WP_032700847.1 hypothetical protein -
MC50_RS27505 () 30892..31320 - 429 WP_032700848.1 antirestriction protein -
MC50_RS27510 () 31490..32275 - 786 WP_047665740.1 hypothetical protein -
MC50_RS27515 () 32329..32748 - 420 WP_032700850.1 DUF1380 domain-containing protein -
MC50_RS27520 () 32760..32981 - 222 WP_032700851.1 hypothetical protein -
MC50_RS27525 () 32981..33661 - 681 WP_032700852.1 DNA methylase -
MC50_RS27530 () 34039..34318 - 280 Protein_48 hypothetical protein -
MC50_RS27535 () 34636..34866 - 231 WP_047665741.1 hypothetical protein -
MC50_RS27540 () 34930..35601 - 672 WP_032700854.1 plasmid partitioning/stability family protein -
MC50_RS27545 () 35604..36575 - 972 WP_077255421.1 StbA family protein -
MC50_RS27550 () 36794..37237 + 444 WP_040118420.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
MC50_RS27555 () 37237..38505 + 1269 WP_047665742.1 Y-family DNA polymerase -
MC50_RS27560 () 38670..38921 + 252 WP_032752108.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin Detail
MC50_RS27565 () 38918..39205 + 288 WP_032693963.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
MC50_RS27575 () 40256..40573 + 318 WP_032752112.1 hypothetical protein -
MC50_RS27580 () 41371..42342 - 972 WP_032752114.1 ParB/RepB/Spo0J family plasmid partition protein -
MC50_RS27585 () 42342..43508 - 1167 WP_032752115.1 Sporulation initiation inhibitor protein Soj VF
MC50_RS27590 () 44327..45337 + 1011 WP_032752116.1 RepB family plasmid replication initiator protein -
MC50_RS27595 () 45646..46386 - 741 WP_032752117.1 site-specific integrase -
MC50_RS27605 () 46851..48542 - 1692 WP_047665743.1 AIPR family protein -
MC50_RS27610 () 48955..49487 - 533 Protein_62 IS256 family transposase ISEae1 Transposase
MC50_RS27615 () 49814..50557 - 744 WP_040118423.1 site-specific integrase -
MC50_RS27620 () 50599..50928 - 330 WP_040118424.1 hypothetical protein -
MC50_RS27625 () 51237..51905 - 669 WP_040118425.1 hypothetical protein -
MC50_RS27635 () 52154..53322 + 1169 WP_098141323.1 IS3 family transposase ISLad1 Transposase
MC50_RS27640 () 53315..53518 - 204 WP_047665745.1 hypothetical protein -
MC50_RS27645 () 54396..55304 + 909 WP_047665749.1 HNH endonuclease -
MC50_RS27650 () 55712..56062 - 351 WP_007871800.1 DUF305 domain-containing protein -
MC50_RS27655 () 56208..56639 - 432 WP_007374411.1 silver-binding protein SilE -
MC50_RS27660 () 56885..58360 - 1476 WP_040118426.1 copper/silver sensor histidine kinase SilS -
MC50_RS27665 () 58353..59033 - 681 WP_004118655.1 Transcriptional regulatory protein CusR VF
MC50_RS27670 () 59223..60608 + 1386 WP_000475503.1 Cation efflux system protein CusC VF
MC50_RS27675 () 60637..60990 + 354 WP_001246153.1 cation efflux system protein CusF -
MC50_RS27680 () 61104..62396 + 1293 WP_001485328.1 Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB -
MC50_RS27685 () 62407..65553 + 3147 WP_000574021.1 Cu(+)/Ag(+) efflux RND transporter permease subunit SilA -
MC50_RS27690 () 65640..66080 + 441 WP_002436620.1 hypothetical protein -
MC50_RS27695 () 66178..68649 + 2472 WP_128306664.1 Ag(+)-translocating P-type ATPase SilP -
MC50_RS27700 () 68690..68887 + 198 WP_000843497.1 DUF2933 domain-containing protein -
MC50_RS27705 () 68921..69658 - 738 WP_004118669.1 Murein DD-endopeptidase MepM VF
MC50_RS27710 () 69947..70396 - 450 WP_001023257.1 copper resistance protein -
MC50_RS27715 () 70631..72448 + 1818 WP_000925242.1 multicopper oxidase PcoA -
MC50_RS27720 () 72454..73344 + 891 WP_001378118.1 copper resistance outer membrane transporter PcoB -
MC50_RS27725 () 73384..73764 + 381 WP_000025662.1 copper resistance system metallochaperone PcoC -
MC50_RS27730 () 73769..74698 + 930 WP_004118344.1 copper resistance inner membrane protein PcoD -
MC50_RS27735 () 74753..75433 + 681 WP_001188930.1 Transcriptional activator protein CopR VF
MC50_RS27740 () 75430..76830 + 1401 WP_002436614.1 copper resistance membrane spanning protein PcoS -
MC50_RS27745 () 77046..77480 + 435 WP_004118347.1 hypothetical protein -
MC50_RS27755 () 77859..77957 - 99 WP_004118688.1 type II toxin-antitoxin system RelE/ParE family toxin -
MC50_RS27760 () 77944..78123 - 180 WP_004118349.1 type II toxin-antitoxin system ParD family antitoxin -
MC50_RS27770 () 78209..78913 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
MC50_RS27775 () 79210..79473 + 264 WP_009310051.1 hypothetical protein -
MC50_RS27780 () 79470..80036 + 567 WP_009310052.1 hypothetical protein -
MC50_RS27785 () 80067..80561 + 495 WP_004213594.1 hypothetical protein -
MC50_RS27790 () 80622..80825 + 204 WP_004150739.1 hemolysin expression modulator Hha -
MC50_RS27795 () 80919..82087 + 1169 WP_102990851.1 IS3 family transposase ISLad1 Transposase
MC50_RS27800 () 82517..84070 - 1554 WP_032716625.1 L-lactate permease -
MC50_RS27805 () 84506..86203 + 1698 WP_003033249.1 D-lactate dehydrogenase -
MC50_RS27810 () 86278..86997 + 720 WP_001102107.1 (Fe-S)-binding protein -
MC50_RS27815 () 87008..88435 + 1428 WP_000023895.1 iron-sulfur cluster-binding protein -
MC50_RS27820 () 88428..89123 + 696 WP_004118595.1 lactate utilization protein C -
MC50_RS27825 () 89173..89553 - 381 Protein_102 gluconate permease -
MC50_RS27830 () 89764..90075 + 312 WP_004118600.1 type II toxin-antitoxin system HigB family toxin Toxin Detail
MC50_RS27835 () 90072..90491 + 420 WP_000990392.1 helix-turn-helix domain-containing protein Antitoxin Detail
MC50_RS27840 () 90528..91730 - 1203 WP_003031541.1 hypothetical protein -
MC50_RS27845 () 91723..92052 - 330 WP_004118613.1 hypothetical protein -
MC50_RS27850 () 92049..92708 - 660 WP_000078540.1 hypothetical protein -
MC50_RS28755 () 93132..93725 - 594 WP_044348674.1 hypothetical protein -
MC50_RS27865 () 94041..94394 + 354 WP_001114073.1 As(III)-sensing metalloregulatory transcriptional repressor ArsR -
MC50_RS27870 () 94442..94804 + 363 WP_000783215.1 arsenite efflux transporter metallochaperone ArsD -
MC50_RS27875 () 94822..96573 + 1752 WP_040118429.1 arsenite efflux transporter ATPase subunit ArsA -
MC50_RS27880 () 96622..97911 + 1290 WP_000922630.1 arsenite efflux transporter membrane subunit ArsB -
MC50_RS27885 () 97924..98349 + 426 WP_000065758.1 glutaredoxin-dependent arsenate reductase -
MC50_RS27890 () 98380..98646 - 267 WP_102047566.1 hypothetical protein -
MC50_RS27895 () 98720..99424 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
MC50_RS27905 () 99454..99822 + 369 WP_040118442.1 hypothetical protein -
MC50_RS27910 () 99816..100373 + 558 WP_003100847.1 Tn3 family transposase TnpR_ISPa38 Transposase
MC50_RS27915 () 100452..101456 + 1005 WP_000427614.1 IS110 family transposase IS5075 Transposase
MC50_RS27925 () 101737..103014 + 1278 WP_064794005.1 arsenic transporter -
MC50_RS27930 () 103064..103492 + 429 WP_001549888.1 glutaredoxin-dependent arsenate reductase -
MC50_RS27935 () 103550..104263 - 714 WP_025801347.1 arsenical resistance protein ArsH -
MC50_RS27940 () 104269..104601 - 333 WP_001549890.1 metalloregulator ArsR/SmtB family transcription factor -
MC50_RS27945 () 105062..105370 + 309 Protein_123 IS5 family transposase ISThi1 Transposase
MC50_RS28760 () 105576..105686 - 111 Protein_124 IS6 family transposase -
MC50_RS27955 () 105752..106456 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
MC50_RS27960 () 106544..107470 - 927 WP_004118843.1 IS110 family transposase IS1663 Transposase
MC50_RS27970 () 108471..108638 + 168 WP_004118231.1 IS3 family transposase IS1400 Transposase
MC50_RS27975 () 108923..110050 + 1128 WP_004118840.1 transporter substrate-binding protein -
MC50_RS27980 () 110047..110640 + 594 WP_004118229.1 ANTAR domain-containing protein -
MC50_RS27985 () 110637..111485 + 849 WP_004118228.1 ABC transporter permease -
MC50_RS27990 () 111485..112405 + 921 WP_004118837.1 ABC transporter permease -
MC50_RS27995 () 112418..114022 + 1605 WP_024196104.1 ABC transporter substrate-binding protein -
MC50_RS28000 () 114067..115014 + 948 WP_004118225.1 acetamidase/formamidase family protein -
MC50_RS28005 () 115022..116755 + 1734 WP_004118832.1 Glutathione import ATP-binding protein GsiA VF
MC50_RS28010 () 116931..117080 + 150 Protein_135 creatininase family protein -
MC50_RS28020 () 117131..117825 + 695 Protein_136 IS1 family transposase IS1A Transposase
MC50_RS28025 () 117840..117980 - 141 Protein_137 galactoside O-acetyltransferase -
MC50_RS28030 () 118046..119299 - 1254 WP_004118826.1 lactose permease -
MC50_RS28035 () 119351..122425 - 3075 WP_032427316.1 beta-galactosidase -
MC50_RS28040 () 122547..123629 - 1083 WP_004152286.1 DNA-binding transcriptional repressor LacI -
MC50_RS28050 () 124090..125100 + 1011 WP_004152284.1 zinc-binding alcohol dehydrogenase family protein -
MC50_RS28055 () 125504..126508 + 1005 WP_000427614.1 IS110 family transposase IS5075 Transposase
MC50_RS28060 () 126889..127242 - 354 WP_001549886.1 metalloregulator ArsR/SmtB family transcription factor -
MC50_RS28065 () 127726..129204 + 1479 WP_001549885.1 SulP family inorganic anion transporter -
MC50_RS28070 () 129223..130050 + 828 WP_004118529.1 universal stress protein -
MC50_RS28075 () 130122..131318 - 1197 WP_001549953.1 MFS transporter -
MC50_RS28080 () 131847..132221 + 375 WP_004118534.1 fluoride efflux transporter CrcB -
MC50_RS28085 () 132496..133644 + 1149 WP_011977829.1 Na+/H+ antiporter NhaA -
MC50_RS28090 () 133998..134330 - 333 WP_004118538.1 multidrug efflux SMR transporter -
MC50_RS28095 () 134462..135019 - 558 WP_004118540.1 Tn3 family transposase ISEc63 Transposase
MC50_RS28100 () 135180..138188 + 3009 WP_004118541.1 Tn3 family transposase ISEc63 Transposase
MC50_RS28105 () 138372..139199 + 828 WP_012637488.1 Glutamine transport ATP-binding protein GlnQ VF
MC50_RS28110 () 139196..140059 + 864 WP_004152695.1 phosphate/phosphite/phosphonate ABC transporter substrate-binding protein -
MC50_RS28115 () 140068..140895 + 828 WP_047665750.1 phosphonate ABC transporter, permease protein PhnE -
MC50_RS28120 () 140904..141914 + 1011 WP_004152693.1 phosphonate dehydrogenase PtxD -
MC50_RS28125 () 141908..142777 + 870 WP_004152692.1 HTH-type transcriptional activator CmpR VF
MC50_RS28130 () 142885..143404 + 520 Protein_157 IS5 family transposase ISPst7 Transposase
MC50_RS28145 () 143986..144966 - 981 WP_000019473.1 IS5 family transposase ISKpn26 Transposase
MC50_RS28150 () 145088..145834 + 747 Protein_159 IS3 family transposase ISKpn38 Transposase
MC50_RS28155 () 146335..147681 - 1347 WP_020314316.1 ISNCY family transposase ISLad2 Transposase
MC50_RS28160 () 147893..148375 - 483 WP_003026803.1 GNAT family N-acetyltransferase Toxin Detail
MC50_RS28165 () 148363..148629 - 267 WP_003026799.1 DUF1778 domain-containing protein Antitoxin Detail
MC50_RS28170 () 148899..149687 + 789 WP_077255422.1 hypothetical protein -
MC50_RS28175 () 149633..150337 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
MC50_RS28180 () 151050..156941 + 5892 WP_004118855.1 DUF3320 domain-containing protein -
MC50_RS28190 () 158332..159204 - 873 WP_040118400.1 incFII family plasmid replication initiator RepA -
MC50_RS28195 () 159197..159268 - 72 WP_071887233.1 RepA leader peptide Tap -
MC50_RS28200 () 159484..159753 - 270 WP_040118434.1 replication regulatory protein RepA -
MC50_RS28205 () 159894..160460 - 567 WP_051800686.1 Phospholipase D VF
MC50_RS28210 () 160467..160670 - 204 Protein_170 DUF2726 domain-containing protein -
MC50_RS28215 () 160701..162086 - 1386 Protein_171 Tn3 family transposase TnpA_TnEc1 Transposase
MC50_RS28220 () 162087..162365 + 279 Protein_172 IS3 family transposase ISEc14 Transposase
MC50_RS28225 () 162568..163377 - 810 WP_004118865.1 N-formylglutamate deformylase -
MC50_RS28230 () 163370..164578 - 1209 WP_004118868.1 imidazolonepropionase -
MC50_RS28235 () 164590..165981 - 1392 WP_004118873.1 cytosine permease -
MC50_RS28240 () 166034..167710 - 1677 WP_040118402.1 urocanate hydratase -
MC50_RS28245 () 168057..169215 + 1159 Protein_177 ATP-binding cassette domain-containing protein -
MC50_RS28250 () 169212..169857 + 646 Protein_178 ABC transporter permease subunit -
MC50_RS28255 () 169917..170426 + 510 Protein_179 aromatic amino acid lyase -
MC50_RS28260 () 170460..171017 - 558 WP_040118404.1 HutD family protein -
MC50_RS28265 () 171014..171775 - 762 WP_032413289.1 histidine utilization repressor -
MC50_RS28270 () 171874..173241 + 1368 WP_004118890.1 formimidoylglutamate deiminase -
MC50_RS28275 () 173464..174155 - 692 Protein_183 IS1 family transposase -
MC50_RS28285 () 174961..176367 + 1407 WP_004118895.1 cytosine permease -
MC50_RS28290 () 176404..177993 + 1590 WP_004118898.1 AMP-binding protein -
MC50_RS28295 () 177990..178982 + 993 WP_004118901.1 DsbA family protein -
MC50_RS28300 () 179100..179207 - 108 Protein_187 antirestriction protein ArdA -
MC50_RS28305 () 179609..179887 + 279 WP_004118904.1 transposase -
MC50_RS28310 () 179970..181145 - 1176 Protein_189 IS3 family transposase -
MC50_RS28315 () 181222..182187 - 966 WP_004118922.1 DMT family transporter -
MC50_RS28320 () 182184..183002 - 819 WP_004118925.1 Glutamine transport ATP-binding protein GlnQ VF
MC50_RS28325 () 183007..183669 - 663 WP_004118928.1 amino acid ABC transporter permease -
MC50_RS28330 () 183666..184337 - 672 WP_004118931.1 amino acid ABC transporter permease -
MC50_RS28335 () 184361..185209 - 849 WP_004118155.1 transporter substrate-binding domain-containing protein -
MC50_RS28340 () 185366..186319 + 954 WP_004118935.1 Glycine cleavage system transcriptional activator VF
MC50_RS28345 () 186406..187617 + 1212 WP_004118158.1 M24 family metallopeptidase -
MC50_RS28350 () 187748..188716 + 969 WP_077260293.1 IS5 family transposase IS903B Transposase
MC50_RS28355 () 188933..189520 - 588 WP_032716672.1 fertility inhibition protein FinO -
MC50_RS28360 () 189662..190387 - 726 WP_040118407.1 type-F conjugative transfer system pilin acetylase TraX -
MC50_RS28365 () 190480..195750 - 5271 WP_047665747.1 Multifunctional conjugation protein TraI Relaxase
MC50_RS28370 () 195750..198080 - 2331 WP_040118437.1 type IV conjugative transfer system coupling protein TraD -
MC50_RS28375 () 198274..199005 - 732 WP_032716670.1 complement resistance protein TraT -
MC50_RS28380 () 199200..199814 - 615 WP_032732092.1 hypothetical protein -
MC50_RS28385 () 199840..202662 - 2823 WP_047665748.1 conjugal transfer mating pair stabilization protein TraG -
MC50_RS28390 () 202662..204032 - 1371 WP_032700807.1 conjugal transfer protein TraH -
MC50_RS28395 () 204019..204447 - 429 WP_032700808.1 conjugal transfer protein TrbF -
MC50_RS28400 () 204440..205006 - 567 WP_032732090.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
MC50_RS28405 () 204981..205217 - 237 WP_032700810.1 type-F conjugative transfer system pilin chaperone TraQ -
MC50_RS28410 () 205228..205980 - 753 WP_040118410.1 type-F conjugative transfer system pilin assembly protein TraF -
MC50_RS28415 () 206003..206329 - 327 WP_032700812.1 hypothetical protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance