MGE detailed information
MGE type: Prophage MGE length: 48987 bp
Accession: NZ_CP025859 Location: 1606877..1655863 Organism: Escherichia coli strain 504239 Replicon: chromosome
Accession: NZ_CP025859 Location: 1606877..1655863 Organism: Escherichia coli strain 504239 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CXV92_RS07915 () | 1602716..1605562 | + | 2847 | WP_000820429.1 | Ag43/Cah family autotransporter adhesin | - |
| CXV92_RS07920 () | 1605634..1605867 | + | 234 | WP_001117567.1 | DUF905 family protein | - |
| CXV92_RS07930 () | 1605967..1606785 | + | 819 | WP_001234594.1 | DUF945 domain-containing protein | - |
| CXV92_RS07935 () | 1606877..1607362 | + | 486 | WP_000213708.1 | antirestriction protein | - |
| CXV92_RS07940 () | 1607377..1607853 | + | 477 | WP_001484796.1 | RadC family protein | - |
| CXV92_RS07945 () | 1607916..1608137 | + | 222 | WP_000692315.1 | DUF987 domain-containing protein | - |
| CXV92_RS07950 () | 1608212..1608580 | + | 369 | WP_016255729.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| CXV92_RS07955 () | 1608670..1609044 | + | 375 | WP_001094452.1 | TA system toxin CbtA family protein | Toxin Detail |
| CXV92_RS07960 () | 1609041..1609532 | + | 492 | WP_000977086.1 | hypothetical protein | - |
| CXV92_RS07965 () | 1609543..1609740 | + | 198 | WP_000839264.1 | DUF957 domain-containing protein | - |
| CXV92_RS07970 () | 1609825..1610670 | + | 846 | WP_001280506.1 | DUF4942 domain-containing protein | - |
| CXV92_RS26425 () | 1611404..1613655 | + | 2252 | Protein_1534 | alpha-amylase family protein | - |
| CXV92_RS07995 () | 1613991..1614968 | + | 978 | WP_001295172.1 | carbon starvation induced protein CsiD | - |
| CXV92_RS08000 () | 1614988..1616256 | + | 1269 | WP_000271943.1 | L-2-hydroxyglutarate oxidase | - |
| CXV92_RS08005 () | 1616279..1617727 | + | 1449 | WP_000772690.1 | NADP-dependent succinate-semialdehyde dehydrogenase | - |
| CXV92_RS08010 () | 1617741..1619021 | + | 1281 | WP_000097651.1 | hypothetical protein | VF |
| CXV92_RS08015 () | 1619332..1620732 | + | 1401 | WP_001295173.1 | GABA permease | - |
| CXV92_RS08020 () | 1620753..1621415 | + | 663 | WP_000156811.1 | DNA-binding transcriptional regulator CsiR | - |
| CXV92_RS08025 () | 1621416..1621865 | - | 450 | WP_000522415.1 | potassium binding protein Kbp | - |
| CXV92_RS08030 () | 1621949..1622107 | - | 159 | WP_000508177.1 | YqaE/Pmp3 family membrane protein | - |
| CXV92_RS08035 () | 1622290..1622589 | + | 300 | WP_000137280.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| CXV92_RS08040 () | 1622599..1623123 | + | 525 | WP_001229442.1 | thiosulfate sulfurtransferase YgaP | - |
| CXV92_RS08045 () | 1623170..1623574 | - | 405 | WP_000115383.1 | DNA-binding protein StpA | - |
| CXV92_RS08050 () | 1624243..1624692 | + | 450 | WP_000492656.1 | L-alanine exporter AlaE | - |
| CXV92_RS08055 () | 1624729..1625073 | - | 345 | WP_000281320.1 | DUF2002 family protein | - |
| CXV92_RS08060 () | 1625225..1625554 | + | 330 | WP_001295174.1 | DUF883 domain-containing protein | - |
| CXV92_RS08065 () | 1625802..1626047 | + | 246 | WP_001223227.1 | glutaredoxin-like protein NrdH | - |
| CXV92_RS08070 () | 1626044..1626454 | + | 411 | WP_000080947.1 | class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI | - |
| CXV92_RS08075 () | 1626427..1628571 | + | 2145 | WP_000246527.1 | class 1b ribonucleoside-diphosphate reductase subunit alpha | - |
| CXV92_RS08080 () | 1628581..1629540 | + | 960 | WP_000777964.1 | class 1b ribonucleoside-diphosphate reductase subunit beta | - |
| CXV92_RS08085 () | 1629895..1631097 | + | 1203 | WP_000985483.1 | hypothetical protein | VF |
| CXV92_RS08090 () | 1631090..1632154 | + | 1065 | WP_000774988.1 | glycine betaine/L-proline ABC transporter permease ProW | - |
| CXV92_RS08095 () | 1632211..1633203 | + | 993 | WP_001216521.1 | glycine betaine/L-proline ABC transporter substrate-binding protein ProX | - |
| CXV92_RS08100 () | 1633395..1634579 | + | 1185 | WP_000165683.1 | MFS transporter | - |
| CXV92_RS08105 () | 1634703..1635440 | + | 738 | WP_000445658.1 | L-valine exporter subunit YgaZ | - |
| CXV92_RS08110 () | 1635430..1635765 | + | 336 | WP_000119750.1 | L-valine transporter subunit YgaH | - |
| CXV92_RS08115 () | 1635856..1636386 | + | 531 | WP_000378442.1 | hypothetical protein | VF |
| CXV92_RS08120 () | 1636513..1637685 | + | 1173 | WP_001295175.1 | hypothetical protein | VF |
| CXV92_RS08125 () | 1637702..1639240 | + | 1539 | WP_001295176.1 | hypothetical protein | VF |
| CXV92_RS08130 () | 1639304..1639819 | - | 516 | WP_001130211.1 | hypothetical protein | VF |
| CXV92_RS08135 () | 1639969..1641525 | - | 1557 | WP_000611804.1 | glutamate--cysteine ligase | - |
| CXV92_RS08140 () | 1641598..1642026 | - | 429 | WP_001287454.1 | DedA family protein | - |
| CXV92_RS08145 () | 1642023..1642589 | - | 567 | WP_000273290.1 | fructose-1-phosphate/6-phosphogluconate phosphatase | - |
| CXV92_RS08175 () | 1644047..1644232 | - | 186 | WP_000906486.1 | carbon storage regulator CsrA | - |
| CXV92_RS08180 () | 1644467..1647097 | - | 2631 | WP_000047170.1 | alanine--tRNA ligase | - |
| CXV92_RS08185 () | 1647225..1647725 | - | 501 | WP_000140506.1 | recombination regulator RecX | - |
| CXV92_RS08190 () | 1647794..1648855 | - | 1062 | WP_000963143.1 | recombinase RecA | - |
| CXV92_RS08195 () | 1648935..1649432 | - | 498 | WP_000132231.1 | nicotinamide-nucleotide amidase | - |
| CXV92_RS08200 () | 1649577..1650662 | - | 1086 | WP_001295177.1 | lytic murein transglycosylase B | - |
| CXV92_RS08205 () | 1650918..1651481 | + | 564 | WP_000573321.1 | PTS glucitol/sorbitol transporter subunit IIC | - |
| CXV92_RS08210 () | 1651478..1652436 | + | 959 | Protein_1573 | PTS glucitol/sorbitol transporter subunit IIB | - |
| CXV92_RS08215 () | 1652447..1652818 | + | 372 | WP_000216194.1 | PTS glucitol/sorbitol transporter subunit IIA | - |
| CXV92_RS08220 () | 1652822..1653601 | + | 780 | WP_001077358.1 | sorbitol-6-phosphate dehydrogenase | - |
| CXV92_RS08225 () | 1653706..1654065 | + | 360 | WP_000252908.1 | transcriptional regulator GutM | - |
| CXV92_RS08230 () | 1654132..1654905 | + | 774 | WP_000804550.1 | glucitol operon DNA-binding transcriptional repressor SrlR | - |
| CXV92_RS08235 () | 1654898..1655863 | + | 966 | WP_001287420.1 | Chromosome-partitioning ATPase Soj | VF |
| CXV92_RS08240 () | 1655860..1657374 | - | 1515 | WP_000010749.1 | nitric oxide reductase transcriptional regulator NorR | - |
| CXV92_RS08245 () | 1657561..1659000 | + | 1440 | WP_000029611.1 | anaerobic nitric oxide reductase flavorubredoxin | - |
| CXV92_RS08250 () | 1658997..1660130 | + | 1134 | WP_000064738.1 | NADH:flavorubredoxin reductase NorW | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|