MGE detailed information
MGE type: Conjugative plasmid MGE length: 110160 bp
Accession: NZ_CP025751 Location: 1..110160 Organism: Escherichia coli strain CV839-06 Replicon: plasmid pCV839-06-p1
Accession: NZ_CP025751 Location: 1..110160 Organism: Escherichia coli strain CV839-06 Replicon: plasmid pCV839-06-p1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CV83906_RS00010 () | 558..995 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| CV83906_RS00015 () | 995..2062 | - | 1068 | WP_001302629.1 | hypothetical protein | VF |
| CV83906_RS00025 () | 2686..2982 | - | 297 | WP_000494779.1 | hypothetical protein | - |
| CV83906_RS00030 () | 3158..3412 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| CV83906_RS00035 () | 3574..4125 | - | 552 | WP_000744644.1 | hypothetical protein | - |
| CV83906_RS00045 () | 4298..4981 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| CV83906_RS00055 () | 5235..5768 | - | 534 | WP_001372168.1 | transcription termination factor NusG | - |
| CV83906_RS00065 () | 6210..6497 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| CV83906_RS00070 () | 6415..6678 | - | 264 | WP_001324596.1 | ash family protein | - |
| CV83906_RS00085 () | 7651..8682 | + | 1032 | WP_000907870.1 | replication initiation protein | - |
| CV83906_RS26750 () | 9589..9776 | + | 188 | Protein_11 | hypothetical protein | - |
| CV83906_RS00105 () | 10074..10397 | - | 324 | WP_001175594.1 | helix-turn-helix domain-containing protein | - |
| CV83906_RS00110 () | 10502..11635 | + | 1134 | WP_001089728.1 | permease | - |
| CV83906_RS00115 () | 11928..12545 | - | 618 | WP_000521603.1 | hypothetical protein | - |
| CV83906_RS00120 () | 12736..14292 | - | 1557 | WP_000818556.1 | AAA family ATPase | - |
| CV83906_RS00125 () | 14555..15145 | - | 591 | WP_000194575.1 | hypothetical protein | - |
| CV83906_RS00130 () | 15145..15402 | - | 258 | WP_000343085.1 | hypothetical protein | - |
| CV83906_RS00135 () | 15756..17894 | + | 2139 | WP_000350639.1 | AAA family ATPase | - |
| CV83906_RS00140 () | 18140..18976 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| CV83906_RS00145 () | 18976..19779 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| CV83906_RS00155 () | 20065..21273 | + | 1209 | WP_001352368.1 | IS4 family transposase IS10R | Transposase |
| CV83906_RS00160 () | 21289..21408 | - | 120 | Protein_22 | LysR family transcriptional regulator | - |
| CV83906_RS00165 () | 21639..22844 | - | 1206 | WP_000599533.1 | sodium/glutamate symporter | - |
| CV83906_RS00170 () | 23288..23608 | + | 321 | WP_000562370.1 | antibiotic biosynthesis monooxygenase | - |
| CV83906_RS00175 () | 23601..23987 | + | 387 | WP_000460651.1 | hypothetical protein | - |
| CV83906_RS00180 () | 23995..24681 | + | 687 | WP_001284954.1 | winged helix-turn-helix domain-containing protein | - |
| CV83906_RS00185 () | 24659..25282 | - | 624 | WP_000088605.1 | Tetracycline repressor protein class B from transposon Tn10 | VF |
| CV83906_RS00190 () | 25364..26569 | + | 1206 | WP_001089072.1 | Tetracycline resistance protein, class B | ARG |
| CV83906_RS00195 () | 26682..27275 | - | 594 | WP_000428546.1 | tetracyline resistance-associated transcriptional repressor TetC | - |
| CV83906_RS00200 () | 27408..27779 | + | 372 | WP_035689358.1 | Transposon Tn10 TetD protein | VF |
| CV83906_RS00205 () | 27789..28997 | - | 1209 | WP_001339197.1 | IS4 family transposase IS10R | Transposase |
| CV83906_RS00220 () | 30227..30850 | - | 624 | WP_000904897.1 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| CV83906_RS00225 () | 30976..33861 | + | 2886 | WP_001138082.1 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| CV83906_RS00230 () | 33922..34338 | - | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| CV83906_RS00235 () | 34335..34565 | - | 231 | WP_001261287.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| CV83906_RS00245 () | 34861..35151 | + | 291 | WP_000111771.1 | hypothetical protein | - |
| CV83906_RS00250 () | 35141..36040 | + | 900 | WP_000963206.1 | nucleotide-binding protein | - |
| CV83906_RS00255 () | 36090..38315 | - | 2226 | WP_000698737.1 | phage T7 exclusion protein | - |
| CV83906_RS00260 () | 38317..39405 | - | 1089 | WP_000952217.1 | transcriptional repressor PifC | - |
| CV83906_RS00265 () | 39957..40370 | + | 414 | WP_000465036.1 | hypothetical protein | - |
| CV83906_RS00270 () | 40372..41151 | + | 780 | WP_001164198.1 | site-specific integrase | - |
| CV83906_RS00275 () | 41330..41974 | + | 645 | WP_001144036.1 | ParA family protein | - |
| CV83906_RS00280 () | 42061..42369 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| CV83906_RS00285 () | 42783..43763 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| CV83906_RS00290 () | 43756..44172 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| CV83906_RS00295 () | 44174..45448 | - | 1275 | WP_000457492.1 | Y-family DNA polymerase | - |
| CV83906_RS00300 () | 45448..45885 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| CV83906_RS00305 () | 45882..46130 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| CV83906_RS00315 () | 46548..47450 | + | 903 | WP_000273918.1 | DUF1281 domain-containing protein | - |
| CV83906_RS00320 () | 47447..47758 | + | 312 | WP_010891263.1 | hypothetical protein | - |
| CV83906_RS00325 () | 47835..48518 | + | 684 | WP_000086178.1 | DNA methylase | - |
| CV83906_RS00330 () | 48519..48740 | + | 222 | WP_001104887.1 | hypothetical protein | - |
| CV83906_RS00335 () | 48752..49186 | + | 435 | WP_000274403.1 | DUF1380 family protein | - |
| CV83906_RS26475 () | 49237..50007 | + | 771 | WP_001044393.1 | hypothetical protein | - |
| CV83906_RS00350 () | 50548..50850 | + | 303 | WP_072132163.1 | antirestriction protein | - |
| CV83906_RS00355 () | 50897..51319 | + | 423 | WP_000271729.1 | DUF1380 family protein | - |
| CV83906_RS00360 () | 51316..51507 | + | 192 | WP_001027500.1 | hypothetical protein | - |
| CV83906_RS00365 () | 51840..51908 | - | 69 | Protein_59 | pilus protein | - |
| CV83906_RS00375 () | 52277..52804 | + | 528 | WP_001276110.1 | single-stranded DNA-binding protein | - |
| CV83906_RS00380 () | 52862..53095 | + | 234 | WP_000006014.1 | DUF905 domain-containing protein | - |
| CV83906_RS00385 () | 53154..55112 | + | 1959 | WP_001145453.1 | ParB/RepB/Spo0J family partition protein | - |
| CV83906_RS00390 () | 55167..55601 | + | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| CV83906_RS00395 () | 55598..56317 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| CV83906_RS00400 () | 56314..56910 | + | 597 | WP_000978012.1 | hypothetical protein | - |
| CV83906_RS00410 () | 57373..57873 | + | 501 | WP_000117609.1 | antirestriction protein ArdA | - |
| CV83906_RS00425 () | 58602..59036 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| CV83906_RS00430 () | 59128..59394 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| CV83906_RS00435 () | 59459..60400 | + | 942 | WP_039023393.1 | Recombination-promoting nuclease RpnA | VF |
| CV83906_RS26755 () | 60462..60632 | + | 171 | WP_000150325.1 | hypothetical protein | - |
| CV83906_RS00440 () | 60663..60914 | - | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| CV83906_RS26760 () | 60948..61145 | - | 198 | WP_001412266.1 | hypothetical protein | - |
| CV83906_RS00455 () | 61494..62342 | + | 849 | WP_001077047.1 | DUF4942 domain-containing protein | - |
| CV83906_RS00460 () | 62427..62762 | - | 336 | WP_000157098.1 | hypothetical protein | - |
| CV83906_RS00465 () | 62996..63328 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| CV83906_RS00470 () | 63339..66038 | + | 2700 | WP_001306778.1 | Protein TraI | Relaxase |
| CV83906_RS00475 () | 66075..68366 | - | 2292 | WP_001289276.1 | hypothetical protein | - |
| CV83906_RS00480 () | 68359..69429 | - | 1071 | WP_000151582.1 | IncI1-type conjugal transfer protein TrbB | - |
| CV83906_RS00485 () | 69448..70656 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| - () | 70836..70896 | - | 61 | NuclAT_1 | - | - |
| - () | 70836..70896 | - | 61 | NuclAT_1 | - | - |
| - () | 70836..70896 | - | 61 | NuclAT_1 | - | - |
| - () | 70836..70896 | - | 61 | NuclAT_1 | - | - |
| CV83906_RS00490 () | 70963..72054 | - | 1092 | WP_000426061.1 | hypothetical protein | - |
| - () | 72257..72319 | - | 63 | NuclAT_0 | - | - |
| - () | 72257..72319 | - | 63 | NuclAT_0 | - | - |
| - () | 72257..72319 | - | 63 | NuclAT_0 | - | - |
| - () | 72257..72319 | - | 63 | NuclAT_0 | - | - |
| CV83906_RS00495 () | 72369..72521 | + | 153 | WP_001303307.1 | Hok/Gef family protein | Toxin Detail |
| CV83906_RS00500 () | 72593..72844 | - | 252 | WP_001291965.1 | hypothetical protein | - |
| - () | 73231..73282 | - | 52 | NuclAT_2 | - | - |
| - () | 73231..73282 | - | 52 | NuclAT_2 | - | - |
| - () | 73231..73282 | - | 52 | NuclAT_2 | - | - |
| - () | 73231..73282 | - | 52 | NuclAT_2 | - | - |
| CV83906_RS26765 () | 73768..73944 | - | 177 | WP_001054900.1 | hypothetical protein | - |
| CV83906_RS00515 () | 74153..74362 | - | 210 | Protein_84 | hemolysin expression modulator Hha | - |
| CV83906_RS00520 () | 74460..75074 | - | 615 | WP_000578649.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| CV83906_RS00525 () | 75150..77318 | - | 2169 | WP_000698360.1 | IncI1-type conjugal transfer membrane protein TraY | - |
| CV83906_RS00530 () | 77415..77999 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| CV83906_RS00535 () | 78028..79230 | - | 1203 | WP_001189159.1 | IncI1-type conjugal transfer protein TraW | - |
| CV83906_RS00540 () | 79197..79811 | - | 615 | WP_000337394.1 | IncI1-type conjugal transfer protein TraV | - |
| CV83906_RS00545 () | 79811..82855 | - | 3045 | WP_001024752.1 | IncI1-type conjugal transfer protein TraU | - |
| CV83906_RS00550 () | 82945..83745 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| CV83906_RS00555 () | 83729..83917 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| CV83906_RS00560 () | 83981..84385 | - | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| CV83906_RS00565 () | 84436..84963 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| CV83906_RS00570 () | 84963..85667 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| CV83906_RS00575 () | 85667..86956 | - | 1290 | WP_001271997.1 | conjugal transfer protein TraO | - |
| CV83906_RS00580 () | 86959..87942 | - | 984 | WP_001191878.1 | hypothetical protein | VF |
| CV83906_RS00585 () | 87953..88645 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| CV83906_RS00590 () | 88642..88989 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| CV83906_RS00595 () | 89007..92774 | - | 3768 | WP_001141539.1 | DNA primase | - |
| CV83906_RS00600 () | 92864..93415 | - | 552 | WP_000014584.1 | Phospholipase D | VF |
| CV83906_RS00605 () | 93430..93720 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| CV83906_RS00610 () | 93717..94865 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| CV83906_RS00615 () | 94862..95680 | - | 819 | WP_000646097.1 | hypothetical protein | VF |
| CV83906_RS00620 () | 95677..96135 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| CV83906_RS00625 () | 96530..97114 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| CV83906_RS00630 () | 97174..98376 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| CV83906_RS00635 () | 98462..99286 | - | 825 | WP_001238927.1 | hypothetical protein | - |
| CV83906_RS00640 () | 99437..100590 | - | 1154 | Protein_109 | tyrosine-type recombinase/integrase | - |
| CV83906_RS00645 () | 100718..100873 | + | 156 | WP_001302705.1 | hypothetical protein | - |
| CV83906_RS26770 () | 101168..101365 | + | 198 | WP_032159596.1 | hypothetical protein | - |
| CV83906_RS00660 () | 101362..102786 | - | 1425 | WP_024199048.1 | hypothetical protein | VF |
| CV83906_RS00665 () | 102786..103442 | - | 657 | WP_001389386.1 | hypothetical protein | VF |
| CV83906_RS00670 () | 103427..103987 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| CV83906_RS00675 () | 103997..104611 | - | 615 | WP_000959786.1 | hypothetical protein | VF |
| CV83906_RS00680 () | 104629..105726 | - | 1098 | WP_001208805.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| CV83906_RS00685 () | 105739..107292 | - | 1554 | WP_000362202.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| CV83906_RS00690 () | 107303..107755 | - | 453 | WP_001247334.1 | hypothetical protein | VF |
| CV83906_RS00695 () | 107742..108974 | - | 1233 | WP_103645934.1 | hypothetical protein | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|