MGE detailed information
MGE type: IS/Tn MGE length: 387 bp
Accession: NZ_CP025708 Location: 90602..90988 Organism: Escherichia coli strain YDC107 Replicon: plasmid pYDC107_184
Accession: NZ_CP025708 Location: 90602..90988 Organism: Escherichia coli strain YDC107 Replicon: plasmid pYDC107_184
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| YDC107_RS25985 () | 85779..86999 | - | 1221 | WP_000410951.1 | arginine deiminase | - |
| YDC107_RS25990 () | 87892..88374 | + | 483 | Protein_125 | hypothetical protein | - |
| YDC107_RS25995 () | 88320..88766 | - | 447 | Protein_126 | incFII family plasmid replication initiator RepA | - |
| YDC107_RS26000 () | 88759..88833 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| YDC107_RS26005 () | 88917..89033 | + | 117 | WP_071586949.1 | replication protein RepA | - |
| YDC107_RS26010 () | 89069..89326 | - | 258 | WP_000083833.1 | replication regulatory protein RepA | - |
| YDC107_RS26015 () | 89610..89759 | - | 150 | WP_001312851.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 89803..89864 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - () | 89803..89864 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - () | 89803..89864 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - () | 89803..89864 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| YDC107_RS26020 () | 89815..90057 | + | 243 | WP_023149666.1 | hypothetical protein | - |
| YDC107_RS26025 () | 90003..90236 | - | 234 | WP_072142979.1 | hypothetical protein | - |
| YDC107_RS26030 () | 90286..90988 | + | 703 | Protein_133 | IS1 family transposase IS1S | Transposase |
| YDC107_RS26035 () | 90982..91104 | - | 123 | WP_001496308.1 | hypothetical protein | - |
| YDC107_RS26040 () | 91289..91501 | - | 213 | WP_005012601.1 | hypothetical protein | - |
| YDC107_RS26045 () | 91634..92194 | - | 561 | WP_000139363.1 | fertility inhibition protein FinO | - |
| YDC107_RS26050 () | 92249..92995 | - | 747 | WP_000205701.1 | conjugal transfer pilus acetylase TraX | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|