MGE detailed information
MGE type: Prophage MGE length: 28664 bp
Accession: NZ_CP025627 Location: 3715949..3744612 Organism: Escherichia coli strain SCEC020007 Replicon: chromosome
Accession: NZ_CP025627 Location: 3715949..3744612 Organism: Escherichia coli strain SCEC020007 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C0634_RS20475 () | 3711003..3711959 | + | 957 | WP_000121359.1 | molybdenum cofactor insertion chaperone PaoD | - |
| C0634_RS20480 () | 3712010..3712348 | + | 339 | Protein_3470 | LysR family transcriptional regulator | - |
| C0634_RS20485 () | 3712692..3713051 | + | 360 | WP_001350215.1 | hypothetical protein | - |
| C0634_RS20490 () | 3713044..3713586 | - | 543 | WP_000284450.1 | plasmid pRiA4b ORF-3 family protein | - |
| C0634_RS20500 () | 3714188..3714469 | - | 282 | WP_000617443.1 | PerC family transcriptional regulator | - |
| C0634_RS20505 () | 3714730..3715185 | + | 456 | WP_000230707.1 | hypothetical protein | - |
| C0634_RS20510 () | 3715265..3715465 | + | 201 | WP_000678612.1 | hypothetical protein | - |
| C0634_RS20520 () | 3715949..3716386 | + | 438 | WP_016231257.1 | hypothetical protein | - |
| C0634_RS20525 () | 3716449..3718554 | - | 2106 | WP_016231258.1 | hypothetical protein | - |
| C0634_RS20530 () | 3718554..3720020 | - | 1467 | WP_016231259.1 | phage DNA ejection protein | - |
| C0634_RS26510 () | 3720025..3720198 | - | 174 | WP_001018522.1 | hypothetical protein | - |
| C0634_RS20540 () | 3720783..3723539 | - | 2757 | WP_087523544.1 | TOPRIM and DUF927 domain-containing protein | - |
| C0634_RS20545 () | 3723552..3724154 | - | 603 | WP_001058739.1 | hypothetical protein | - |
| C0634_RS20550 () | 3724147..3724368 | - | 222 | WP_000181940.1 | hypothetical protein | - |
| C0634_RS20555 () | 3724365..3724628 | - | 264 | WP_001024673.1 | hypothetical protein | - |
| C0634_RS20560 () | 3724625..3724819 | - | 195 | WP_001065738.1 | hypothetical protein | - |
| C0634_RS20565 () | 3724812..3725879 | - | 1068 | WP_077900594.1 | ash family protein | - |
| C0634_RS20570 () | 3725873..3726055 | - | 183 | WP_033554327.1 | DUF4222 domain-containing protein | - |
| C0634_RS20575 () | 3726048..3726857 | - | 810 | WP_087523546.1 | antA/AntB antirepressor family protein | - |
| C0634_RS20580 () | 3726870..3727301 | - | 432 | WP_000412539.1 | hypothetical protein | - |
| C0634_RS20585 () | 3727301..3727504 | - | 204 | WP_074525659.1 | AlpA family transcriptional regulator | - |
| C0634_RS20595 () | 3727897..3729111 | - | 1215 | WP_021531046.1 | Prophage integrase IntS ; Integrase | Integrase |
| C0634_RS20610 () | 3729467..3730720 | - | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| C0634_RS20615 () | 3730732..3731835 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| C0634_RS20620 () | 3732123..3733178 | + | 1056 | WP_039023169.1 | phosphoporin PhoE | - |
| C0634_RS20625 () | 3733217..3733618 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| C0634_RS20630 () | 3733676..3734920 | - | 1245 | WP_000189532.1 | esterase FrsA | - |
| - () | 3734336..3734416 | - | 81 | NuclAT_12 | - | - |
| - () | 3734336..3734416 | - | 81 | NuclAT_12 | - | - |
| - () | 3734336..3734416 | - | 81 | NuclAT_12 | - | - |
| - () | 3734336..3734416 | - | 81 | NuclAT_12 | - | - |
| C0634_RS20635 () | 3735012..3735470 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| C0634_RS20640 () | 3735731..3737188 | + | 1458 | WP_001292994.1 | cytosol nonspecific dipeptidase | - |
| C0634_RS20645 () | 3737245..3737766 | - | 522 | Protein_3498 | peptide chain release factor H | - |
| C0634_RS20650 () | 3737762..3737968 | - | 207 | Protein_3499 | RtcB family protein | - |
| C0634_RS20660 () | 3738286..3738738 | - | 453 | WP_001059892.1 | GNAT family N-acetyltransferase | - |
| C0634_RS20665 () | 3738748..3739146 | - | 399 | WP_001263489.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| C0634_RS20670 () | 3739149..3739442 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| C0634_RS20675 () | 3739494..3740549 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| C0634_RS20680 () | 3740620..3741405 | - | 786 | WP_000207552.1 | Chemotaxis protein LafU | VF |
| C0634_RS20685 () | 3741377..3743089 | + | 1713 | Protein_3505 | Flagellar biosynthesis protein FlhA | VF |
| C0634_RS20690 () | 3743313..3743810 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| C0634_RS20695 () | 3743986..3744735 | - | 750 | WP_000056849.1 | Murein DD-endopeptidase MepH | VF |
| C0634_RS20700 () | 3744945..3745205 | + | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | - |
| C0634_RS20705 () | 3745208..3745486 | + | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | - |
| C0634_RS20710 () | 3745642..3746382 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| C0634_RS20715 () | 3746353..3747120 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| C0634_RS20720 () | 3747326..3747904 | - | 579 | WP_000284050.1 | D-sedoheptulose 7-phosphate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|