MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 58048 bp
Accession: NZ_CP025466 Location: 4565787..4623834 Organism: Klebsiella pneumoniae strain JS187 Replicon: chromosome
Accession: NZ_CP025466 Location: 4565787..4623834 Organism: Klebsiella pneumoniae strain JS187 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CYE04_RS22935 () | 4561053..4562306 | + | 1254 | WP_004151767.1 | nucleoside permease | - |
| CYE04_RS22940 () | 4562350..4564488 | - | 2139 | WP_004151766.1 | ornithine decarboxylase | - |
| CYE04_RS22950 () | 4564908..4565621 | + | 714 | WP_002916694.1 | DUF554 domain-containing protein | - |
| CYE04_RS22960 () | 4566020..4566967 | - | 948 | WP_002916695.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| CYE04_RS22965 () | 4566984..4568273 | - | 1290 | WP_004188585.1 | TraI domain-containing protein | - |
| CYE04_RS22970 () | 4568408..4569388 | - | 981 | WP_004151764.1 | DUF1738 domain-containing protein | - |
| CYE04_RS22975 () | 4569472..4570077 | - | 606 | WP_004151763.1 | DUF3085 domain-containing protein | - |
| CYE04_RS22980 () | 4570180..4570527 | - | 348 | WP_004151762.1 | hypothetical protein | - |
| CYE04_RS22985 () | 4570625..4571023 | - | 399 | WP_004151761.1 | antirestriction protein | - |
| CYE04_RS22990 () | 4571106..4571384 | - | 279 | WP_004151760.1 | hypothetical protein | - |
| CYE04_RS22995 () | 4571729..4572682 | + | 954 | WP_004151759.1 | hypothetical protein | - |
| CYE04_RS23000 () | 4572687..4573580 | - | 894 | WP_004151758.1 | hypothetical protein ; Integrase | Integrase |
| CYE04_RS30830 () | 4574594..4574734 | - | 141 | WP_004151757.1 | hypothetical protein | - |
| CYE04_RS23005 () | 4574738..4575118 | - | 381 | WP_004152889.1 | hypothetical protein | - |
| CYE04_RS23010 () | 4575117..4575674 | + | 558 | WP_016197678.1 | hypothetical protein | - |
| CYE04_RS23015 () | 4575725..4575985 | - | 261 | WP_004152615.1 | helix-turn-helix domain-containing protein | - |
| CYE04_RS23020 () | 4576088..4576348 | + | 261 | WP_004152614.1 | helix-turn-helix domain-containing protein | - |
| CYE04_RS23025 () | 4576489..4576944 | + | 456 | WP_004152613.1 | cold shock domain-containing protein | - |
| CYE04_RS23030 () | 4577023..4577268 | - | 246 | WP_004155677.1 | helix-turn-helix domain-containing protein | - |
| CYE04_RS23035 () | 4577372..4577623 | + | 252 | WP_004152612.1 | helix-turn-helix domain-containing protein | - |
| CYE04_RS23040 () | 4577848..4578147 | + | 300 | WP_004152611.1 | hypothetical protein | - |
| CYE04_RS23045 () | 4578191..4579720 | - | 1530 | WP_004152610.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| CYE04_RS23050 () | 4579723..4580064 | - | 342 | WP_004152609.1 | hypothetical protein | - |
| CYE04_RS23055 () | 4580061..4581482 | - | 1422 | WP_004153700.1 | integrating conjugative element protein | - |
| CYE04_RS23060 () | 4581498..4582439 | - | 942 | WP_004152607.1 | TIGR03756 family integrating conjugative element protein | - |
| CYE04_RS23065 () | 4582436..4582831 | - | 396 | WP_004152606.1 | TIGR03757 family integrating conjugative element protein | - |
| CYE04_RS23070 () | 4582949..4584547 | - | 1599 | WP_004154311.1 | hypothetical protein | - |
| CYE04_RS23075 () | 4584751..4585761 | - | 1011 | WP_004150870.1 | hypothetical protein | - |
| CYE04_RS23080 () | 4585967..4586584 | - | 618 | WP_004199166.1 | SymE family type I addiction module toxin | - |
| CYE04_RS30835 () | 4587684..4587965 | + | 282 | WP_016197749.1 | hypothetical protein | - |
| CYE04_RS23090 () | 4588018..4589385 | + | 1368 | WP_004150873.1 | hypothetical protein | - |
| CYE04_RS23095 () | 4589625..4590329 | + | 705 | WP_004150874.1 | restriction endonuclease | - |
| CYE04_RS23105 () | 4590831..4593608 | - | 2778 | WP_004188577.1 | conjugative transfer ATPase | - |
| CYE04_RS23110 () | 4593605..4594003 | - | 399 | WP_004150877.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| CYE04_RS23115 () | 4594017..4595501 | - | 1485 | WP_004217763.1 | TIGR03752 family integrating conjugative element protein | - |
| CYE04_RS23120 () | 4595498..4596343 | - | 846 | WP_004150879.1 | TIGR03749 family integrating conjugative element protein | - |
| CYE04_RS23125 () | 4596343..4596996 | - | 654 | WP_004150880.1 | TIGR03746 family integrating conjugative element protein | - |
| CYE04_RS23130 () | 4596993..4597364 | - | 372 | WP_004150881.1 | TIGR03750 family conjugal transfer protein | - |
| CYE04_RS23135 () | 4597374..4597727 | - | 354 | WP_004150882.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| CYE04_RS23140 () | 4597742..4597978 | - | 237 | WP_004150883.1 | TIGR03758 family integrating conjugative element protein | - |
| CYE04_RS23145 () | 4597975..4598292 | - | 318 | WP_004150884.1 | hypothetical protein | - |
| CYE04_RS23150 () | 4598741..4599415 | + | 675 | WP_004217767.1 | hypothetical protein | - |
| CYE04_RS23155 () | 4599675..4600151 | - | 477 | WP_004150886.1 | hypothetical protein | - |
| CYE04_RS23160 () | 4600253..4600945 | - | 693 | WP_072093156.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| CYE04_RS23165 () | 4601011..4601274 | - | 264 | WP_004150888.1 | hypothetical protein | - |
| CYE04_RS23170 () | 4601271..4603370 | - | 2100 | WP_004150889.1 | type IV conjugative transfer system coupling protein TraD | - |
| CYE04_RS23175 () | 4603408..4603920 | - | 513 | WP_004153655.1 | integrating conjugative element protein | - |
| CYE04_RS23180 () | 4603917..4604486 | - | 570 | WP_004150891.1 | hypothetical protein | VF |
| CYE04_RS23185 () | 4604465..4605082 | - | 618 | WP_004153005.1 | TIGR03759 family integrating conjugative element protein | - |
| CYE04_RS23190 () | 4605196..4605936 | - | 741 | WP_004150893.1 | hypothetical protein | - |
| CYE04_RS23195 () | 4605936..4606505 | - | 570 | WP_004150894.1 | hypothetical protein | VF |
| CYE04_RS23200 () | 4606629..4607081 | - | 453 | WP_004150895.1 | DUF3577 domain-containing protein | - |
| CYE04_RS30840 () | 4607668..4607805 | - | 138 | WP_014343427.1 | hypothetical protein | - |
| CYE04_RS23205 () | 4607798..4608520 | - | 723 | WP_004150896.1 | TIGR03761 family integrating conjugative element protein | - |
| CYE04_RS23210 () | 4608914..4609999 | + | 1086 | WP_004150897.1 | hypothetical protein | - |
| CYE04_RS23215 () | 4610164..4610865 | + | 702 | WP_004227625.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| CYE04_RS23220 () | 4610941..4611696 | - | 756 | WP_022644655.1 | DUF2321 domain-containing protein | - |
| CYE04_RS23225 () | 4612087..4613415 | - | 1329 | WP_004150900.1 | WG repeat-containing protein | - |
| CYE04_RS30845 () | 4613597..4613866 | + | 270 | Protein_4406 | hypothetical protein | - |
| CYE04_RS23235 () | 4614557..4615774 | - | 1218 | WP_004150902.1 | helix-turn-helix domain-containing protein | - |
| CYE04_RS23240 () | 4615774..4616358 | - | 585 | WP_004150903.1 | DUF2857 domain-containing protein | - |
| CYE04_RS23245 () | 4616358..4617980 | - | 1623 | WP_004150904.1 | transcriptional regulator | - |
| CYE04_RS23250 () | 4617977..4619344 | - | 1368 | WP_004150905.1 | replicative DNA helicase | - |
| CYE04_RS23255 () | 4619337..4619720 | - | 384 | WP_004150906.1 | hypothetical protein | - |
| CYE04_RS23260 () | 4619720..4620592 | - | 873 | WP_004188557.1 | hypothetical protein | VF |
| CYE04_RS23270 () | 4621198..4621414 | - | 217 | Protein_4413 | IS3 family transposase ISYpe1 | Transposase |
| CYE04_RS23275 () | 4621511..4622104 | - | 594 | WP_004188553.1 | hypothetical protein | - |
| CYE04_RS23280 () | 4622808..4623293 | - | 486 | WP_004150910.1 | GNAT family N-acetyltransferase | Toxin Detail |
| CYE04_RS23285 () | 4623290..4623583 | - | 294 | WP_004150912.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| CYE04_RS23290 () | 4624228..4625604 | + | 1377 | WP_004217775.1 | cystathionine beta-synthase | - |
| CYE04_RS23295 () | 4625615..4626763 | + | 1149 | WP_004150915.1 | PLP-dependent aspartate aminotransferase family protein | - |
| CYE04_RS23300 () | 4626764..4627675 | - | 912 | WP_004188550.1 | LysR family transcriptional regulator | - |
| CYE04_RS23305 () | 4627773..4628375 | + | 603 | WP_002916735.1 | short chain dehydrogenase | - |
| CYE04_RS23310 () | 4628462..4628806 | + | 345 | WP_004174409.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Klebsiella pneumoniae subsp. pneumoniae HS11286 | Integrative and Conjugative Element | TA26030 | NC_016845 | 4502831..4561944 | 0 |