MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 61016 bp
Accession: NZ_CP025419 Location: 1105334..1166349 Organism: Streptococcus suis strain SH0104 Replicon: chromosome
Accession: NZ_CP025419 Location: 1105334..1166349 Organism: Streptococcus suis strain SH0104 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CRH08_RS05700 () | 1101036..1101530 | - | 495 | WP_024383745.1 | PcfB family protein | - |
| CRH08_RS05705 () | 1101523..1104117 | - | 2595 | WP_024406075.1 | G5 domain-containing protein | - |
| CRH08_RS05710 () | 1104114..1105073 | - | 960 | WP_024383747.1 | hypothetical protein | - |
| CRH08_RS05715 () | 1105334..1106539 | - | 1206 | WP_024409315.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| CRH08_RS05720 () | 1106542..1106790 | - | 249 | WP_029743105.1 | DUF3173 family protein | - |
| CRH08_RS05725 () | 1107060..1107284 | - | 225 | WP_003108992.1 | helix-turn-helix domain-containing protein | - |
| CRH08_RS05730 () | 1107531..1108427 | - | 897 | WP_024409316.1 | aldose 1-epimerase family protein | - |
| CRH08_RS05735 () | 1108515..1109921 | - | 1407 | WP_024409317.1 | 6-phospho-beta-galactosidase | - |
| CRH08_RS05740 () | 1109987..1111690 | - | 1704 | WP_024409318.1 | lactose-specific PTS transporter subunit EIIC | - |
| CRH08_RS05745 () | 1111690..1112007 | - | 318 | WP_024409319.1 | PTS lactose/cellobiose transporter subunit IIA | - |
| CRH08_RS05750 () | 1112035..1113015 | - | 981 | WP_029743106.1 | tagatose-bisphosphate aldolase | - |
| CRH08_RS05755 () | 1113018..1113950 | - | 933 | WP_024409321.1 | tagatose-6-phosphate kinase | - |
| CRH08_RS05760 () | 1113962..1114476 | - | 515 | Protein_1066 | galactose-6-phosphate isomerase subunit LacB | - |
| CRH08_RS05765 () | 1114510..1114935 | - | 426 | WP_003084983.1 | galactose-6-phosphate isomerase subunit LacA | - |
| CRH08_RS05770 () | 1115172..1116122 | - | 951 | WP_024409322.1 | ROK family glucokinase | - |
| CRH08_RS05775 () | 1116302..1117063 | + | 762 | WP_024409323.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| CRH08_RS05780 () | 1117079..1117739 | + | 661 | Protein_1070 | HAD family hydrolase | - |
| CRH08_RS05785 () | 1117783..1119648 | - | 1866 | WP_025310409.1 | relaxase/mobilization nuclease domain-containing protein | - |
| CRH08_RS05790 () | 1119635..1120000 | - | 366 | WP_024409325.1 | MobC family plasmid mobilization relaxosome protein | - |
| CRH08_RS05795 () | 1120010..1120369 | - | 360 | WP_024409326.1 | hypothetical protein | - |
| CRH08_RS05800 () | 1120695..1121285 | - | 591 | WP_024409327.1 | hypothetical protein | - |
| CRH08_RS05805 () | 1121326..1123251 | - | 1926 | WP_024409328.1 | ATP-dependent helicase | - |
| CRH08_RS05810 () | 1123248..1125071 | - | 1824 | Protein_1076 | AAA family ATPase | - |
| CRH08_RS05815 () | 1125079..1126023 | - | 945 | WP_024409330.1 | IS30 family transposase IS1252 | Transposase |
| CRH08_RS05825 () | 1126114..1126317 | - | 204 | Protein_1078 | AAA family ATPase | - |
| CRH08_RS05830 () | 1126298..1127092 | - | 795 | WP_024409332.1 | zeta toxin family protein | Toxin Detail |
| CRH08_RS05835 () | 1127092..1127568 | - | 477 | WP_024409333.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| CRH08_RS05840 () | 1127638..1127922 | - | 285 | WP_024409334.1 | hypothetical protein | - |
| CRH08_RS05845 () | 1127966..1128361 | - | 396 | WP_017285409.1 | hypothetical protein | - |
| CRH08_RS05850 () | 1128365..1128592 | - | 228 | WP_024409335.1 | hypothetical protein | - |
| CRH08_RS05855 () | 1128646..1129734 | - | 1089 | WP_024409336.1 | toprim domain-containing protein | - |
| CRH08_RS05860 () | 1129774..1130412 | - | 639 | WP_024409337.1 | hypothetical protein | - |
| CRH08_RS05865 () | 1130523..1130813 | - | 291 | WP_024409338.1 | hypothetical protein | - |
| CRH08_RS05870 () | 1130828..1131127 | - | 300 | WP_024382151.1 | hypothetical protein | - |
| CRH08_RS05875 () | 1131197..1132108 | - | 912 | WP_032505215.1 | hypothetical protein | - |
| CRH08_RS05880 () | 1132149..1133869 | - | 1721 | Protein_1089 | IS607 family transposase ISTsi1 | Transposase |
| CRH08_RS05885 () | 1133923..1134114 | - | 192 | WP_000503424.1 | hypothetical protein | - |
| CRH08_RS05890 () | 1134185..1134415 | - | 231 | WP_000659121.1 | hypothetical protein | - |
| CRH08_RS05895 () | 1134492..1135346 | - | 855 | WP_000743701.1 | ParB/RepB/Spo0J family partition protein | - |
| CRH08_RS05900 () | 1135354..1136319 | - | 966 | WP_001145977.1 | plasmid recombination protein | - |
| CRH08_RS05905 () | 1136838..1137869 | - | 1032 | WP_001170965.1 | AAA family ATPase | - |
| CRH08_RS05910 () | 1138023..1138496 | - | 474 | WP_000323521.1 | sigma-70 family RNA polymerase sigma factor | - |
| CRH08_RS05915 () | 1138580..1139005 | - | 426 | WP_000323896.1 | sigma-70 family RNA polymerase sigma factor | - |
| CRH08_RS05920 () | 1139100..1139609 | - | 510 | WP_000872511.1 | hypothetical protein | VF |
| CRH08_RS05935 () | 1140099..1140272 | - | 174 | WP_011528024.1 | cysteine-rich KTR domain-containing protein | - |
| CRH08_RS05940 () | 1140324..1142243 | - | 1920 | WP_000691759.1 | Tetracycline resistance protein TetO | VF |
| CRH08_RS05945 () | 1142610..1142984 | - | 375 | WP_001140406.1 | TnpV protein | - |
| CRH08_RS05950 () | 1142965..1148898 | - | 5934 | WP_024409341.1 | DEAD/DEAH box helicase family protein | - |
| CRH08_RS05955 () | 1148949..1149500 | - | 552 | WP_024409342.1 | hypothetical protein | - |
| CRH08_RS05960 () | 1149484..1149675 | - | 192 | WP_018165734.1 | thrombospondin type 3 repeat-containing protein | - |
| CRH08_RS05965 () | 1149676..1154580 | - | 4905 | WP_024409343.1 | Agglutinin receptor | VF |
| CRH08_RS05970 () | 1154822..1155415 | - | 594 | WP_024409344.1 | hypothetical protein | - |
| CRH08_RS05975 () | 1155660..1158464 | - | 2805 | WP_024409345.1 | CHAP domain-containing protein | - |
| CRH08_RS05980 () | 1158461..1160812 | - | 2352 | WP_032505216.1 | ATPase AAA | - |
| CRH08_RS05985 () | 1160769..1161122 | - | 354 | WP_001097593.1 | PrgI family protein | - |
| CRH08_RS05990 () | 1161185..1162039 | - | 855 | WP_024409347.1 | type IV secretion system protein | - |
| CRH08_RS05995 () | 1162056..1162298 | - | 243 | WP_024409348.1 | hypothetical protein | - |
| CRH08_RS06000 () | 1162316..1164136 | - | 1821 | WP_024409349.1 | type IV secretory system conjugative DNA transfer family protein | - |
| CRH08_RS06005 () | 1164136..1164624 | - | 489 | WP_024409350.1 | hypothetical protein | - |
| CRH08_RS06010 () | 1164701..1165282 | - | 582 | WP_024409351.1 | CPBP family intramembrane metalloprotease | - |
| CRH08_RS06015 () | 1165285..1165518 | - | 234 | WP_024409352.1 | hypothetical protein | - |
| CRH08_RS06020 () | 1165528..1165911 | - | 384 | WP_024409353.1 | arsenate reductase | - |
| CRH08_RS06025 () | 1165921..1166349 | - | 429 | WP_024409354.1 | hypothetical protein | - |
| CRH08_RS06030 () | 1166333..1167688 | - | 1356 | WP_029743109.1 | DNA (cytosine-5-)-methyltransferase | - |
| CRH08_RS06035 () | 1167846..1168670 | - | 825 | WP_009909851.1 | replication initiator protein A | - |
| CRH08_RS06040 () | 1168667..1168840 | - | 174 | WP_006738653.1 | hypothetical protein | - |
| CRH08_RS06045 () | 1169100..1169465 | - | 366 | WP_002936483.1 | 50S ribosomal protein L7/L12 | - |
| CRH08_RS06050 () | 1169531..1170025 | - | 495 | WP_002936486.1 | 50S ribosomal protein L10 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|