MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 98752 bp
Accession: NZ_CP025286 Location: 542852..641603 Organism: Ethanoligenens harbinense YUAN-3 Replicon: chromosome
Accession: NZ_CP025286 Location: 542852..641603 Organism: Ethanoligenens harbinense YUAN-3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CXQ68_RS02635 () | 537979..538317 | - | 339 | WP_013484056.1 | hypothetical protein | - |
| CXQ68_RS02640 () | 538488..538811 | - | 324 | WP_013484055.1 | Mor transcription activator domain-containing protein | - |
| CXQ68_RS02645 () | 538808..539308 | - | 501 | WP_013484054.1 | regulatory protein GemA | - |
| CXQ68_RS02650 () | 539339..540004 | - | 666 | WP_013484053.1 | hypothetical protein | - |
| CXQ68_RS02655 () | 539991..540263 | - | 273 | WP_013484052.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| CXQ68_RS02660 () | 540265..540705 | - | 441 | WP_013484051.1 | hypothetical protein | - |
| CXQ68_RS02665 () | 540807..541115 | - | 309 | WP_013484469.1 | hypothetical protein | - |
| CXQ68_RS02670 () | 541108..541581 | - | 474 | WP_013484470.1 | hypothetical protein | - |
| CXQ68_RS02675 () | 541588..541875 | - | 288 | WP_013484471.1 | DUF3789 domain-containing protein | - |
| CXQ68_RS02680 () | 541886..542836 | - | 951 | WP_013484472.1 | AAA family ATPase | - |
| CXQ68_RS02685 () | 542852..544804 | - | 1953 | WP_106919180.1 | hypothetical protein ; Integrase | Integrase |
| CXQ68_RS02695 () | 544899..545732 | - | 834 | WP_013484474.1 | ATP-binding protein | - |
| CXQ68_RS02700 () | 545734..546075 | - | 342 | WP_013484475.1 | conserved phage C-terminal domain-containing protein | - |
| CXQ68_RS02705 () | 546092..546271 | - | 180 | WP_013484043.1 | hypothetical protein | - |
| CXQ68_RS02710 () | 546429..546839 | + | 411 | WP_013484476.1 | helix-turn-helix domain-containing protein | - |
| CXQ68_RS02715 () | 546826..547242 | + | 417 | WP_041686602.1 | ImmA/IrrE family metallo-endopeptidase | - |
| CXQ68_RS02720 () | 547536..547955 | + | 420 | WP_083803590.1 | restriction endonuclease | - |
| CXQ68_RS02725 () | 548514..549311 | - | 798 | WP_013484478.1 | IS21 family transposase ISMac9 | Transposase |
| CXQ68_RS14800 () | 549308..550529 | - | 1222 | Protein_520 | IS21 family transposase ISMac9 | Transposase |
| CXQ68_RS02740 () | 550994..551545 | + | 552 | WP_013484479.1 | sigma-70 family RNA polymerase sigma factor | - |
| CXQ68_RS02745 () | 551532..552326 | + | 795 | WP_013484480.1 | hypothetical protein | - |
| CXQ68_RS02750 () | 552317..553207 | + | 891 | WP_013484481.1 | putative ABC transporter ATP-binding protein YxlF | VF |
| CXQ68_RS02755 () | 553188..554339 | + | 1152 | WP_013484482.1 | ABC transporter permease | - |
| CXQ68_RS14805 () | 554452..554817 | - | 366 | WP_175405609.1 | hypothetical protein | - |
| CXQ68_RS02770 () | 555175..555606 | + | 432 | WP_013484484.1 | sigma-70 family RNA polymerase sigma factor | - |
| CXQ68_RS02775 () | 555661..555855 | + | 195 | WP_083803591.1 | DUF3847 domain-containing protein | - |
| CXQ68_RS02780 () | 556050..557486 | + | 1437 | Protein_528 | MobA/MobL family protein | - |
| CXQ68_RS02785 () | 557535..557762 | - | 228 | WP_083803592.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| CXQ68_RS02790 () | 557813..558088 | - | 276 | WP_013484486.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| CXQ68_RS02795 () | 558553..558753 | + | 201 | WP_013484488.1 | transposon-encoded TnpW family protein | - |
| CXQ68_RS02800 () | 559016..559126 | + | 111 | Protein_532 | transposase | - |
| CXQ68_RS02805 () | 559360..560691 | + | 1332 | WP_013484489.1 | ferredoxin reductase family protein | - |
| CXQ68_RS02810 () | 560726..561109 | + | 384 | WP_013484490.1 | cytochrome b5 | - |
| CXQ68_RS02815 () | 561192..561443 | + | 252 | WP_041687065.1 | SHOCT domain-containing protein | - |
| CXQ68_RS02820 () | 561500..562186 | + | 687 | WP_041686605.1 | Transcriptional regulatory protein WalR | VF |
| CXQ68_RS02825 () | 562183..563622 | + | 1440 | WP_013484493.1 | HAMP domain-containing histidine kinase | - |
| CXQ68_RS02830 () | 563895..564671 | - | 777 | WP_013484494.1 | 3-alpha-hydroxycholanate dehydrogenase (NADP(+)) | VF |
| CXQ68_RS02835 () | 564668..565387 | - | 720 | WP_013484495.1 | SDR family oxidoreductase | - |
| CXQ68_RS02840 () | 565634..566506 | + | 873 | WP_013484496.1 | LysR family transcriptional regulator | - |
| CXQ68_RS02845 () | 567067..572604 | - | 5538 | WP_013484497.1 | phosphodiester glycosidase family protein | - |
| CXQ68_RS02850 () | 573258..573767 | - | 510 | WP_137143828.1 | hypothetical protein | - |
| CXQ68_RS14490 () | 574075..574281 | - | 207 | WP_137143829.1 | hypothetical protein | - |
| CXQ68_RS02865 () | 574551..574946 | + | 396 | WP_041686606.1 | hypothetical protein | - |
| CXQ68_RS02870 () | 575149..578418 | - | 3270 | WP_013484500.1 | leucine-rich repeat protein | - |
| CXQ68_RS02875 () | 579249..585110 | + | 5862 | WP_013484501.1 | Beta-L-arabinobiosidase | VF |
| CXQ68_RS02880 () | 585323..585493 | + | 171 | WP_083803766.1 | DUF1540 domain-containing protein | - |
| CXQ68_RS02885 () | 585582..585794 | + | 213 | WP_041686607.1 | hypothetical protein | - |
| CXQ68_RS02890 () | 585941..586834 | + | 894 | WP_041686608.1 | hypothetical protein | - |
| CXQ68_RS02895 () | 586831..587742 | + | 912 | WP_013484505.1 | putative ABC transporter ATP-binding protein YxlF | VF |
| CXQ68_RS02900 () | 587751..588593 | + | 843 | WP_106919263.1 | ABC transporter permease subunit | - |
| CXQ68_RS02905 () | 590218..590991 | + | 774 | WP_013484507.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| CXQ68_RS02910 () | 591165..592292 | + | 1128 | WP_041687071.1 | ABC transporter substrate-binding protein | - |
| CXQ68_RS02915 () | 592368..593180 | + | 813 | WP_013484509.1 | alkaline phosphatase family protein | - |
| CXQ68_RS02920 () | 593186..594040 | + | 855 | WP_013484510.1 | ABC transporter permease subunit | - |
| CXQ68_RS02925 () | 594030..594809 | + | 780 | WP_013484511.1 | ABC transporter permease subunit | - |
| CXQ68_RS02930 () | 594838..595848 | + | 1011 | WP_013484512.1 | Spermidine/putrescine import ATP-binding protein PotA | VF |
| CXQ68_RS02935 () | 595878..596603 | + | 726 | WP_013484513.1 | HAD family hydrolase | - |
| CXQ68_RS02945 () | 597366..598340 | - | 975 | WP_013484515.1 | class I mannose-6-phosphate isomerase | - |
| CXQ68_RS02950 () | 598390..598647 | - | 258 | WP_013484516.1 | HPr family phosphocarrier protein | - |
| CXQ68_RS02955 () | 598650..600065 | - | 1416 | WP_013484517.1 | PTS fructose transporter subunit IIBC | - |
| CXQ68_RS02960 () | 600144..600605 | - | 462 | WP_013484518.1 | PTS sugar transporter subunit IIA | - |
| CXQ68_RS02965 () | 600668..602593 | - | 1926 | WP_159033344.1 | PTS sugar transporter subunit IIA | - |
| CXQ68_RS14495 () | 603022..603387 | + | 366 | WP_137143831.1 | hypothetical protein | - |
| CXQ68_RS02970 () | 603772..604134 | + | 363 | WP_013484520.1 | NifB/NifX family molybdenum-iron cluster-binding protein | - |
| CXQ68_RS02975 () | 604260..605099 | + | 840 | WP_013484521.1 | ATP-binding protein | - |
| CXQ68_RS02980 () | 605096..605971 | + | 876 | WP_013484522.1 | ATP-binding protein | - |
| CXQ68_RS02985 () | 605982..606401 | + | 420 | WP_013484523.1 | acyl-CoA thioesterase | - |
| CXQ68_RS02990 () | 606408..606776 | + | 369 | WP_013484524.1 | dinitrogenase iron-molybdenum cofactor biosynthesis protein | - |
| CXQ68_RS02995 () | 606872..607717 | + | 846 | WP_013484525.1 | MBL fold metallo-hydrolase | - |
| CXQ68_RS03000 () | 607895..609379 | - | 1485 | WP_013484527.1 | aldehyde dehydrogenase family protein | - |
| CXQ68_RS03005 () | 609958..611316 | - | 1359 | WP_041687075.1 | aspartate aminotransferase family protein | - |
| CXQ68_RS03010 () | 611393..612523 | - | 1131 | WP_013484529.1 | iron-containing alcohol dehydrogenase | - |
| CXQ68_RS03015 () | 612779..613330 | - | 552 | WP_013484530.1 | XRE family transcriptional regulator | - |
| CXQ68_RS03020 () | 613836..614570 | + | 735 | WP_013484531.1 | HTH-type transcriptional regulator MalT | VF |
| CXQ68_RS03025 () | 614788..615138 | + | 351 | WP_013484532.1 | P-II family nitrogen regulator | - |
| CXQ68_RS03030 () | 615177..616271 | + | 1095 | WP_041687076.1 | Spermidine/putrescine import ATP-binding protein PotA | VF |
| CXQ68_RS03035 () | 616284..617150 | + | 867 | WP_013484534.1 | ABC transporter permease | - |
| CXQ68_RS03040 () | 617155..619089 | + | 1935 | WP_013484535.1 | Spermidine/putrescine-binding periplasmic protein | VF |
| CXQ68_RS03045 () | 619421..620773 | + | 1353 | WP_013484536.1 | Putrescine aminotransferase | VF |
| CXQ68_RS03050 () | 621490..622173 | + | 684 | WP_041686611.1 | Transcriptional regulatory protein WalR | VF |
| CXQ68_RS03055 () | 622170..623489 | + | 1320 | WP_013484539.1 | HAMP domain-containing histidine kinase | - |
| CXQ68_RS03060 () | 623587..624294 | + | 708 | WP_013484540.1 | ABC transporter ATP-binding protein | - |
| CXQ68_RS03065 () | 624300..627542 | + | 3243 | WP_156793967.1 | FtsX-like permease family protein | - |
| CXQ68_RS14810 () | 627946..628071 | + | 126 | Protein_585 | SDR family NAD(P)-dependent oxidoreductase | - |
| CXQ68_RS03080 () | 628172..628513 | + | 342 | WP_083803767.1 | hypothetical protein | - |
| CXQ68_RS03085 () | 628527..629571 | + | 1045 | Protein_587 | PTS glucitol/sorbitol transporter subunit IIB | - |
| CXQ68_RS03090 () | 629731..630093 | + | 363 | WP_041687081.1 | PTS glucitol/sorbitol transporter subunit IIA | - |
| CXQ68_RS03095 () | 630131..630432 | + | 302 | Protein_589 | HPr family phosphocarrier protein | - |
| CXQ68_RS03100 () | 630513..630905 | + | 393 | WP_013484544.1 | GntR family transcriptional regulator | - |
| CXQ68_RS03105 () | 630895..631632 | + | 738 | WP_049776532.1 | ABC transporter ATP-binding protein | - |
| CXQ68_RS03110 () | 631623..632414 | + | 792 | WP_013484546.1 | hypothetical protein | - |
| CXQ68_RS03115 () | 632491..633018 | + | 528 | WP_013484547.1 | hypothetical protein | - |
| CXQ68_RS03120 () | 633046..633972 | + | 927 | WP_013484548.1 | Fluoroquinolones export ATP-binding protein | VF |
| CXQ68_RS03125 () | 633965..635011 | + | 1047 | WP_013484549.1 | ABC transporter permease subunit | - |
| CXQ68_RS03130 () | 635474..636676 | + | 1203 | WP_013484550.1 | PLP-dependent aminotransferase family protein | - |
| CXQ68_RS03135 () | 636762..637133 | + | 372 | WP_013484551.1 | hypothetical protein | - |
| CXQ68_RS03140 () | 637232..637519 | + | 288 | WP_041686617.1 | hypothetical protein | - |
| CXQ68_RS03145 () | 637535..638380 | + | 846 | WP_013484552.1 | sulfite exporter TauE/SafE family protein | - |
| CXQ68_RS03150 () | 638380..638739 | + | 360 | WP_013484553.1 | DUF1634 domain-containing protein | - |
| CXQ68_RS03155 () | 638765..639649 | - | 885 | WP_013484554.1 | LysR family transcriptional regulator | - |
| CXQ68_RS03160 () | 639759..640751 | + | 993 | WP_013484555.1 | YeiH family protein | - |
| CXQ68_RS03165 () | 640910..641260 | - | 351 | WP_013484556.1 | rhodanese-like domain-containing protein | - |
| CXQ68_RS03170 () | 641280..641603 | - | 324 | WP_013484557.1 | Thioredoxin | VF |
| CXQ68_RS03175 () | 641852..642229 | - | 378 | WP_013484558.1 | C-GCAxxG-C-C family protein | - |
| CXQ68_RS03180 () | 642460..643002 | - | 543 | WP_137143833.1 | hypothetical protein | - |
| CXQ68_RS03185 () | 643144..643278 | - | 135 | Protein_607 | recombinase | - |
| CXQ68_RS03190 () | 643275..643571 | - | 297 | WP_013484561.1 | hypothetical protein | - |
| CXQ68_RS03195 () | 644155..644514 | + | 360 | WP_013484562.1 | IS66 family insertion sequence hypothetical protein | - |
| CXQ68_RS03200 () | 644514..644864 | + | 351 | WP_013484563.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| CXQ68_RS03205 () | 644930..646462 | + | 1533 | WP_013484564.1 | IS66 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|