MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 96745 bp
Accession: NZ_CP025085 Location: 4349590..4446334 Organism: Serratia sp. ATCC 39006 strain LacA Replicon: chromosome
Accession: NZ_CP025085 Location: 4349590..4446334 Organism: Serratia sp. ATCC 39006 strain LacA Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CWC46_RS19750 () | 4344967..4346430 | + | 1464 | WP_021014821.1 | L-asparagine permease | - |
| CWC46_RS19755 () | 4346480..4348633 | - | 2154 | WP_021014820.1 | ornithine decarboxylase | - |
| CWC46_RS19765 () | 4349590..4350552 | - | 963 | WP_021014819.1 | site-specific integrase | - |
| CWC46_RS19770 () | 4350593..4351462 | - | 870 | WP_101377568.1 | DNA-binding domain-containing protein | - |
| CWC46_RS19775 () | 4352284..4352838 | + | 555 | WP_021014817.1 | hypothetical protein | - |
| CWC46_RS19780 () | 4353146..4354090 | + | 945 | WP_021014815.1 | hypothetical protein | - |
| CWC46_RS19785 () | 4354216..4355421 | + | 1206 | WP_021014814.1 | conjugal transfer protein TraF | - |
| CWC46_RS19790 () | 4355474..4356019 | + | 546 | WP_021014813.1 | hypothetical protein | - |
| CWC46_RS23115 () | 4356250..4356465 | + | 216 | WP_210404730.1 | FxLYD domain-containing protein | - |
| CWC46_RS19800 () | 4356542..4357225 | - | 684 | WP_021014812.1 | type I restriction-modification system subunit M | - |
| CWC46_RS19805 () | 4357333..4357692 | - | 360 | WP_021014811.1 | hypothetical protein | - |
| CWC46_RS19810 () | 4357694..4358620 | - | 927 | WP_021014810.1 | DUF1281 domain-containing protein | - |
| CWC46_RS19815 () | 4358721..4359008 | - | 288 | WP_051391490.1 | TA system toxin CbtA family protein | - |
| CWC46_RS19820 () | 4359017..4360018 | - | 1002 | WP_021014808.1 | DUF1738 domain-containing protein | - |
| CWC46_RS19825 () | 4360261..4360590 | - | 330 | WP_021014807.1 | hypothetical protein | - |
| CWC46_RS19830 () | 4360699..4361040 | - | 342 | WP_021014806.1 | hypothetical protein | - |
| CWC46_RS19835 () | 4361903..4363077 | + | 1175 | WP_101377519.1 | IS3 family transposase | - |
| CWC46_RS19840 () | 4363326..4363946 | + | 621 | WP_021014805.1 | LysE family translocator | - |
| CWC46_RS19845 () | 4364058..4367681 | - | 3624 | WP_021014804.1 | hypothetical protein | - |
| CWC46_RS19850 () | 4368025..4369545 | + | 1521 | WP_021014803.1 | ISNCY family transposase | - |
| CWC46_RS19860 () | 4369929..4370852 | - | 924 | WP_021014801.1 | integrase domain-containing protein | - |
| CWC46_RS22950 () | 4371934..4372347 | + | 414 | WP_021014800.1 | hypothetical protein | - |
| CWC46_RS19875 () | 4372701..4373339 | - | 639 | WP_021014799.1 | hypothetical protein | - |
| CWC46_RS19880 () | 4373327..4373662 | - | 336 | WP_021014798.1 | hypothetical protein | - |
| CWC46_RS19885 () | 4374102..4374362 | + | 261 | WP_021014797.1 | hypothetical protein | - |
| CWC46_RS19890 () | 4374502..4375383 | + | 882 | WP_021014796.1 | CRISPR-associated endonuclease Cas1 | - |
| CWC46_RS19895 () | 4375376..4375672 | + | 297 | WP_021014795.1 | CRISPR-associated endonuclease Cas2 | - |
| CWC46_RS19900 () | 4376784..4379234 | + | 2451 | WP_021014794.1 | type III-A CRISPR-associated protein Cas10/Csm1 | - |
| CWC46_RS19905 () | 4379259..4379642 | + | 384 | WP_021014793.1 | type III-A CRISPR-associated protein Csm2 | - |
| CWC46_RS19910 () | 4379655..4380401 | + | 747 | WP_021014792.1 | type III-A CRISPR-associated RAMP protein Csm3 | - |
| CWC46_RS19915 () | 4380401..4381381 | + | 981 | WP_021014791.1 | hypothetical protein | - |
| CWC46_RS19920 () | 4381378..4383057 | + | 1680 | WP_021014790.1 | DUF324 domain-containing protein | - |
| CWC46_RS19925 () | 4383054..4383977 | + | 924 | WP_021014789.1 | CRISPR system precrRNA processing endoribonuclease RAMP protein Cas6 | - |
| CWC46_RS19930 () | 4384030..4384782 | - | 753 | WP_021014788.1 | hypothetical protein | - |
| CWC46_RS19935 () | 4385855..4386241 | + | 387 | WP_157831389.1 | hypothetical protein | - |
| CWC46_RS19940 () | 4386280..4387809 | - | 1530 | WP_021014786.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| CWC46_RS19945 () | 4387821..4388174 | - | 354 | WP_021014785.1 | hypothetical protein | - |
| CWC46_RS19950 () | 4388171..4389589 | - | 1419 | WP_021014784.1 | integrating conjugative element protein | - |
| CWC46_RS19955 () | 4389600..4390574 | - | 975 | WP_021014783.1 | TIGR03756 family integrating conjugative element protein | - |
| CWC46_RS19960 () | 4390571..4390975 | - | 405 | WP_021014782.1 | TIGR03757 family integrating conjugative element protein | - |
| CWC46_RS19965 () | 4391277..4391528 | + | 252 | WP_021014781.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| CWC46_RS19970 () | 4391525..4391812 | + | 288 | WP_021014780.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CWC46_RS19975 () | 4391954..4392352 | - | 399 | WP_021014779.1 | hypothetical protein | - |
| CWC46_RS19980 () | 4392349..4395168 | - | 2820 | WP_021014778.1 | conjugative transfer ATPase | - |
| CWC46_RS19985 () | 4395168..4395575 | - | 408 | WP_021014777.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| CWC46_RS19990 () | 4395661..4397184 | - | 1524 | WP_021014776.1 | TIGR03752 family integrating conjugative element protein | - |
| CWC46_RS19995 () | 4397181..4398053 | - | 873 | WP_037381288.1 | TIGR03749 family integrating conjugative element protein | - |
| CWC46_RS20000 () | 4398074..4398733 | - | 660 | WP_021014774.1 | TIGR03746 family integrating conjugative element protein | - |
| CWC46_RS20005 () | 4398730..4399104 | - | 375 | WP_021014773.1 | TIGR03750 family conjugal transfer protein | - |
| CWC46_RS20010 () | 4399114..4399464 | - | 351 | WP_021014772.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| CWC46_RS20015 () | 4399480..4399725 | - | 246 | WP_021014771.1 | TIGR03758 family integrating conjugative element protein | - |
| CWC46_RS20020 () | 4399725..4400039 | - | 315 | WP_021014770.1 | RAQPRD family integrative conjugative element protein | - |
| CWC46_RS20025 () | 4400681..4400926 | + | 246 | WP_051391489.1 | hypothetical protein | - |
| CWC46_RS20030 () | 4400981..4401214 | - | 234 | WP_021014768.1 | PerC family transcriptional regulator | - |
| CWC46_RS20035 () | 4401222..4401980 | - | 759 | WP_021014767.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| CWC46_RS20040 () | 4401980..4404085 | - | 2106 | WP_021014766.1 | type IV conjugative transfer system coupling protein TraD | - |
| CWC46_RS20045 () | 4404082..4404669 | - | 588 | WP_021014765.1 | restriction endonuclease | - |
| CWC46_RS20050 () | 4404666..4405184 | - | 519 | WP_021014764.1 | integrating conjugative element protein | - |
| CWC46_RS20055 () | 4405181..4405819 | - | 639 | WP_021014763.1 | transglycosylase SLT domain-containing protein | - |
| CWC46_RS20060 () | 4405798..4406520 | - | 723 | WP_051391466.1 | TIGR03759 family integrating conjugative element protein | - |
| CWC46_RS20065 () | 4406530..4407375 | - | 846 | WP_021014761.1 | hypothetical protein | - |
| CWC46_RS20070 () | 4407474..4408685 | - | 1212 | WP_084297598.1 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| CWC46_RS20075 () | 4408689..4409369 | - | 681 | WP_021014759.1 | A24 family peptidase | - |
| CWC46_RS20080 () | 4409366..4409842 | - | 477 | WP_021014758.1 | lytic transglycosylase domain-containing protein | - |
| CWC46_RS20085 () | 4409849..4410439 | - | 591 | WP_021014757.1 | PilS domain-containing protein | - |
| CWC46_RS20090 () | 4410450..4411568 | - | 1119 | WP_037380658.1 | type II secretion system F family protein | - |
| CWC46_RS20095 () | 4411561..4413129 | - | 1569 | WP_021014755.1 | Flp pilus assembly complex ATPase component TadA | - |
| CWC46_RS20100 () | 4413143..4413655 | - | 513 | WP_021014754.1 | type IV pilus biogenesis protein PilP | - |
| CWC46_RS20105 () | 4413642..4414934 | - | 1293 | WP_021014753.1 | type 4b pilus protein PilO2 | - |
| CWC46_RS20110 () | 4414937..4416625 | - | 1689 | WP_051391487.1 | PilN family type IVB pilus formation outer membrane protein | - |
| CWC46_RS20115 () | 4416643..4417080 | - | 438 | WP_021014751.1 | type IV pilus biogenesis protein PilM | - |
| CWC46_RS20120 () | 4417080..4418279 | - | 1200 | WP_021014750.1 | TcpQ domain-containing protein | - |
| CWC46_RS20125 () | 4418483..4418914 | - | 432 | WP_021014749.1 | DUF29 domain-containing protein | - |
| CWC46_RS20130 () | 4419146..4419688 | - | 543 | WP_021014748.1 | single-stranded DNA-binding protein | - |
| CWC46_RS20135 () | 4419766..4420266 | - | 501 | WP_021014747.1 | DUF3577 domain-containing protein | - |
| CWC46_RS20140 () | 4420895..4422907 | - | 2013 | WP_021014746.1 | DNA topoisomerase III | - |
| CWC46_RS20145 () | 4422917..4423657 | - | 741 | WP_021014745.1 | TIGR03761 family integrating conjugative element protein | - |
| CWC46_RS20150 () | 4423678..4424112 | - | 435 | WP_101377520.1 | hypothetical protein | - |
| CWC46_RS20155 () | 4424116..4425372 | - | 1257 | WP_021014744.1 | helix-turn-helix domain-containing protein | - |
| CWC46_RS20160 () | 4425479..4425712 | - | 234 | WP_021014743.1 | hypothetical protein | - |
| CWC46_RS20165 () | 4425709..4426290 | - | 582 | WP_037380654.1 | DUF2857 domain-containing protein | - |
| CWC46_RS20170 () | 4426382..4427137 | - | 756 | WP_021014740.1 | DUF2786 domain-containing protein | - |
| CWC46_RS20175 () | 4427124..4427372 | - | 249 | WP_021014739.1 | TraR/DksA C4-type zinc finger protein | - |
| CWC46_RS20180 () | 4427362..4429086 | - | 1725 | WP_021014738.1 | ParB family protein | - |
| CWC46_RS20185 () | 4429086..4430459 | - | 1374 | WP_021014737.1 | replicative DNA helicase | - |
| CWC46_RS20190 () | 4430456..4431331 | - | 876 | WP_021014736.1 | ParA family protein | - |
| CWC46_RS20195 () | 4431623..4431997 | + | 375 | Protein_3900 | DUF4102 domain-containing protein | - |
| CWC46_RS20210 () | 4433046..4433999 | - | 954 | WP_021014734.1 | LysR family transcriptional regulator | - |
| CWC46_RS20215 () | 4434196..4435355 | + | 1160 | Protein_3902 | iron-containing alcohol dehydrogenase | - |
| CWC46_RS20220 () | 4435415..4435720 | + | 306 | WP_021014732.1 | DUF1330 domain-containing protein | - |
| CWC46_RS20225 () | 4435760..4436308 | + | 549 | WP_021014731.1 | NAD(P)H-dependent oxidoreductase | - |
| CWC46_RS20230 () | 4436499..4437635 | + | 1137 | WP_021014730.1 | MBL fold metallo-hydrolase | - |
| CWC46_RS20235 () | 4437813..4437980 | - | 168 | WP_084297624.1 | hypothetical protein | - |
| CWC46_RS20245 () | 4438439..4438837 | - | 399 | WP_021014728.1 | cupin domain-containing protein | - |
| CWC46_RS20250 () | 4438868..4440016 | - | 1149 | WP_021014727.1 | iron-containing alcohol dehydrogenase | - |
| CWC46_RS20255 () | 4440221..4440568 | - | 348 | WP_037381254.1 | hypothetical protein | - |
| CWC46_RS20260 () | 4440720..4441748 | - | 1029 | WP_021014725.1 | alpha/beta hydrolase | - |
| CWC46_RS20265 () | 4441759..4442955 | - | 1197 | WP_021014724.1 | MFS transporter | - |
| CWC46_RS20270 () | 4443194..4444081 | + | 888 | WP_021014723.1 | LysR family transcriptional regulator | - |
| CWC46_RS20275 () | 4444232..4445230 | - | 999 | Protein_3913 | Fic family protein | - |
| CWC46_RS20285 () | 4445315..4446334 | + | 1020 | WP_021014721.1 | IS630 family transposase | - |
| CWC46_RS22955 () | 4446562..4446810 | - | 249 | WP_037380644.1 | hypothetical protein | - |
| CWC46_RS20295 () | 4446809..4447027 | + | 219 | WP_021014718.1 | type II toxin-antitoxin system antitoxin CcdA | - |
| CWC46_RS20300 () | 4447030..4447335 | + | 306 | WP_021014717.1 | type II toxin-antitoxin system toxin CcdB | - |
| CWC46_RS20305 () | 4447804..4448529 | + | 726 | WP_021014716.1 | SDR family oxidoreductase | - |
| CWC46_RS20310 () | 4448625..4450231 | - | 1607 | Protein_3919 | hybrid sensor histidine kinase/response regulator | - |
| CWC46_RS20315 () | 4450228..4450731 | - | 504 | Protein_3920 | oxidoreductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|