MGE detailed information
MGE type: Prophage MGE length: 50645 bp
Accession: NZ_CP024862 Location: 35753..86397 Organism: Escherichia coli strain AR_0015 Replicon: chromosome
Accession: NZ_CP024862 Location: 35753..86397 Organism: Escherichia coli strain AR_0015 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AM342_RS00105 () | 31069..31896 | + | 828 | WP_029702064.1 | iron/manganese ABC transporter ATP-binding protein SitB | - |
| AM342_RS00110 () | 31893..32750 | + | 858 | WP_001101728.1 | iron/manganese ABC transporter permease subunit SitC | - |
| AM342_RS00115 () | 32747..33604 | + | 858 | WP_000968125.1 | iron/manganese ABC transporter permease subunit SitD | - |
| AM342_RS00120 () | 34077..34871 | + | 795 | WP_000354607.1 | hypothetical protein | - |
| AM342_RS00125 () | 34996..35147 | + | 152 | Protein_23 | DinI-like family protein | - |
| AM342_RS00130 () | 35417..35710 | - | 294 | WP_001405873.1 | hypothetical protein | - |
| AM342_RS00135 () | 35753..36793 | - | 1041 | WP_001314683.1 | tail fiber domain-containing protein | - |
| AM342_RS00140 () | 36803..37084 | - | 282 | WP_000654155.1 | hypothetical protein | - |
| AM342_RS00145 () | 37084..39459 | - | 2376 | WP_042099016.1 | prophage tail fiber N-terminal domain-containing protein | - |
| AM342_RS00150 () | 39524..40123 | - | 600 | WP_001542091.1 | Outer membrane protein X | VF |
| AM342_RS00155 () | 40191..43670 | - | 3480 | WP_021523093.1 | host specificity protein J | - |
| AM342_RS00160 () | 43731..44333 | - | 603 | WP_049286672.1 | tail assembly protein | - |
| AM342_RS00165 () | 44270..45013 | - | 744 | WP_032153655.1 | C40 family peptidase | - |
| AM342_RS00170 () | 45019..45717 | - | 699 | WP_001551186.1 | phage minor tail protein L | - |
| AM342_RS00175 () | 45717..46046 | - | 330 | WP_000847345.1 | phage tail protein | - |
| AM342_RS00180 () | 46043..48604 | - | 2562 | WP_032153656.1 | phage tail tape measure protein | - |
| AM342_RS00185 () | 48597..49031 | - | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| AM342_RS00190 () | 49013..49435 | - | 423 | WP_000479153.1 | phage minor tail protein G | - |
| AM342_RS00195 () | 49451..50191 | - | 741 | WP_001349920.1 | phage tail protein | - |
| AM342_RS00200 () | 50199..50594 | - | 396 | WP_000683128.1 | phage minor tail U family protein | - |
| AM342_RS00205 () | 50591..51169 | - | 579 | WP_000975070.1 | phage tail protein | - |
| AM342_RS00210 () | 51181..51534 | - | 354 | WP_000752979.1 | head-tail joining protein | - |
| AM342_RS00215 () | 51546..51944 | - | 399 | WP_020233914.1 | DNA-packaging protein FI | - |
| AM342_RS00220 () | 51986..53011 | - | 1026 | WP_000063277.1 | major capsid protein | - |
| AM342_RS00225 () | 53066..53398 | - | 333 | WP_001708751.1 | head decoration protein | - |
| AM342_RS00230 () | 53408..54727 | - | 1320 | WP_020233915.1 | S49 family peptidase | - |
| AM342_RS00235 () | 54708..56309 | - | 1602 | WP_001356819.1 | phage portal protein | - |
| AM342_RS00240 () | 56306..56512 | - | 207 | WP_000198149.1 | gpW family protein | - |
| AM342_RS00245 () | 56509..58434 | - | 1926 | WP_001027269.1 | phage terminase large subunit family protein | - |
| AM342_RS00250 () | 58409..58954 | - | 546 | WP_000453587.1 | DNA-packaging protein | - |
| AM342_RS00255 () | 59343..59576 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| AM342_RS00260 () | 59634..60044 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| AM342_RS00265 () | 60196..60369 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| AM342_RS28180 () | 60541..60696 | - | 156 | WP_001309517.1 | hypothetical protein | - |
| AM342_RS28185 () | 60776..60841 | - | 66 | WP_120795388.1 | hypothetical protein | - |
| AM342_RS00275 () | 60844..61032 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| AM342_RS00280 () | 61043..61255 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| AM342_RS00285 () | 61618..62115 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| AM342_RS00290 () | 62112..62645 | - | 534 | WP_001092971.1 | lysozyme | - |
| AM342_RS00295 () | 62642..62953 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| AM342_RS00300 () | 62958..63173 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| AM342_RS28710 () | 63393..63563 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| AM342_RS00305 () | 63730..64188 | - | 459 | WP_000526135.1 | IS200-IS605 family transposase IS200C | Transposase |
| AM342_RS00315 () | 64639..64854 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| AM342_RS00320 () | 65155..65367 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| AM342_RS28190 () | 65422..65511 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| AM342_RS00325 () | 65789..66541 | - | 753 | WP_001047135.1 | antitermination protein | - |
| AM342_RS00330 () | 66555..67604 | - | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| AM342_RS00335 () | 67606..67884 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| AM342_RS00340 () | 67951..68202 | - | 252 | WP_000980994.1 | hypothetical protein | - |
| AM342_RS00345 () | 68419..68574 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| AM342_RS00350 () | 68646..68933 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| AM342_RS00355 () | 68933..69172 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| AM342_RS00360 () | 69197..69502 | + | 306 | WP_001326990.1 | hypothetical protein | - |
| AM342_RS00365 () | 69705..70037 | + | 333 | WP_001301033.1 | protein FlxA | - |
| AM342_RS00375 () | 70474..71787 | - | 1314 | WP_000589005.1 | ISNCY family transposase ISCARN112 | Transposase |
| AM342_RS00380 () | 72271..73299 | - | 1029 | WP_001345551.1 | DUF4868 domain-containing protein | - |
| AM342_RS00385 () | 73296..73910 | - | 615 | WP_001265627.1 | hypothetical protein | - |
| AM342_RS00390 () | 74119..74784 | - | 666 | WP_021523102.1 | epoxyqueuosine reductase QueH | - |
| AM342_RS00395 () | 74987..75385 | - | 399 | WP_001151242.1 | DUF977 family protein | - |
| AM342_RS00400 () | 75426..76391 | - | 966 | WP_000054487.1 | hypothetical protein | - |
| AM342_RS00405 () | 76372..76893 | - | 522 | WP_000705355.1 | hypothetical protein | - |
| AM342_RS00410 () | 76877..77104 | - | 228 | WP_000921596.1 | transcriptional regulator | - |
| AM342_RS00415 () | 77185..77592 | + | 408 | WP_000381212.1 | helix-turn-helix domain-containing protein | - |
| AM342_RS00420 () | 77761..77916 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| AM342_RS00425 () | 77918..78493 | + | 576 | WP_000344950.1 | hypothetical protein | - |
| AM342_RS00430 () | 78980..79168 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| AM342_RS00435 () | 79165..79356 | + | 192 | WP_001083276.1 | lysis protein YdfD | - |
| AM342_RS00440 () | 79450..81921 | + | 2472 | WP_000048363.1 | exonuclease | - |
| AM342_RS00445 () | 81994..82245 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| AM342_RS00455 () | 82316..82993 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| AM342_RS00460 () | 82993..83340 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| AM342_RS00465 () | 83360..84931 | + | 1572 | WP_029392005.1 | IS66 family transposase ISCro1 | Transposase |
| AM342_RS00470 () | 84987..86267 | + | 1281 | WP_021523105.1 | Putative defective protein IntQ ; Integrase | Integrase |
| AM342_RS00480 () | 86455..87474 | - | 1020 | WP_000836037.1 | Zn-dependent oxidoreductase | - |
| AM342_RS00485 () | 87486..88700 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| AM342_RS00495 () | 88906..89232 | - | 327 | WP_001314753.1 | YnfA family protein | - |
| AM342_RS00500 () | 89367..89708 | + | 342 | WP_000705205.1 | DUF1283 family protein | - |
| AM342_RS00505 () | 89743..90303 | + | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| AM342_RS00510 () | 90306..91016 | - | 711 | WP_001445899.1 | YnfC family lipoprotein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|