MGE detailed information
MGE type: Prophage MGE length: 24327 bp
Accession: NZ_CP024473 Location: 3536923..3561249 Organism: Shigella flexneri 7b strain 94-3007 Replicon: chromosome
Accession: NZ_CP024473 Location: 3536923..3561249 Organism: Shigella flexneri 7b strain 94-3007 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CPZ98_RS17945 (3532522) | 3532522..3532815 | - | 294 | WP_000081083.1 | ferredoxin family protein | - |
| CPZ98_RS17950 (3532812) | 3532812..3534101 | - | 1290 | WP_001278524.1 | FAD-dependent oxidoreductase | - |
| CPZ98_RS17955 (3534157) | 3534157..3535095 | - | 939 | Protein_3453 | electron transfer flavoprotein subunit alpha | - |
| CPZ98_RS17960 (3535115) | 3535115..3535879 | - | 765 | WP_000692136.1 | electron transfer flavoprotein | - |
| CPZ98_RS17965 (3536195) | 3536195..3536674 | + | 480 | Protein_3455 | cupin domain-containing protein | - |
| CPZ98_RS17970 (3536729) | 3536729..3537426 | + | 698 | WP_223368647.1 | IS1 family transposase | - |
| CPZ98_RS17975 (3537420) | 3537420..3537587 | - | 168 | WP_005062520.1 | hypothetical protein | - |
| CPZ98_RS17980 (3537989) | 3537989..3538750 | - | 762 | WP_000060475.1 | acid stress response transcriptional regulator YdeO | - |
| CPZ98_RS17985 (3538818) | 3538818..3539021 | - | 204 | WP_000543383.1 | two-component system connector SafA | - |
| CPZ98_RS17990 (3539269) | 3539269..3541548 | - | 2280 | WP_130862199.1 | acid resistance putative oxidoreductase YdeP | - |
| CPZ98_RS17995 (3541882) | 3541882..3542310 | - | 429 | Protein_3461 | fimbrial protein | - |
| CPZ98_RS18000 (3542367) | 3542367..3543064 | + | 698 | WP_232046037.1 | IS1 family transposase | - |
| CPZ98_RS18005 (3543082) | 3543082..3543960 | + | 879 | Protein_3463 | IS3-like element IS600 family transposase | - |
| CPZ98_RS18010 (3543957) | 3543957..3544262 | - | 306 | WP_071818640.1 | hypothetical protein | - |
| CPZ98_RS18015 (3544287) | 3544287..3544526 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| CPZ98_RS18020 (3544526) | 3544526..3544813 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| CPZ98_RS18025 (3544885) | 3544885..3545040 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| CPZ98_RS18030 (3545258) | 3545258..3545473 | + | 216 | WP_000980986.1 | hypothetical protein | - |
| CPZ98_RS18035 (3545576) | 3545576..3545854 | + | 279 | Protein_3469 | hypothetical protein | - |
| CPZ98_RS18040 (3545856) | 3545856..3546905 | + | 1050 | WP_001265249.1 | DUF968 domain-containing protein | - |
| CPZ98_RS18045 (3546918) | 3546918..3547274 | + | 357 | WP_000904111.1 | RusA family crossover junction endodeoxyribonuclease | - |
| CPZ98_RS18050 (3547289) | 3547289..3548110 | + | 822 | WP_000762884.1 | antitermination protein | - |
| CPZ98_RS18070 (3549031) | 3549031..3549139 | + | 109 | Protein_3473 | DUF3927 family protein | - |
| CPZ98_RS18075 (3549420) | 3549420..3549755 | - | 336 | WP_000871291.1 | anti-adapter protein IraM | - |
| CPZ98_RS18080 (3550015) | 3550015..3550200 | + | 186 | Protein_3475 | DUF1737 domain-containing protein | - |
| CPZ98_RS26020 (3550200) | 3550200..3550361 | + | 162 | WP_001323614.1 | hypothetical protein | - |
| CPZ98_RS18085 (3550511) | 3550511..3550690 | + | 180 | WP_000372594.1 | class II holin family protein | - |
| CPZ98_RS18095 (3551933) | 3551933..3552952 | + | 1020 | Protein_3479 | MHS family MFS transporter YdfJ | - |
| CPZ98_RS18100 (3553041) | 3553041..3554501 | + | 1461 | WP_000527804.1 | mannitol dehydrogenase family protein | - |
| CPZ98_RS18105 (3554537) | 3554537..3554740 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| CPZ98_RS18110 (3554918) | 3554918..3555604 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| CPZ98_RS18115 (3555693) | 3555693..3556439 | - | 747 | WP_005050098.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| CPZ98_RS18120 (3556576) | 3556576..3558621 | + | 2046 | WP_005062627.1 | peptidyl-dipeptidase Dcp | - |
| CPZ98_RS18125 (3558666) | 3558666..3559184 | - | 519 | WP_001024558.1 | 2-oxo-tetronate isomerase | - |
| CPZ98_RS18130 (3559460) | 3559460..3559684 | + | 225 | Protein_3486 | YdeI family stress tolerance OB fold protein | - |
| CPZ98_RS18135 (3559750) | 3559750..3560906 | + | 1157 | WP_094081518.1 | IS3-like element IS600 family transposase | - |
| CPZ98_RS26515 (3561051) | 3561051..3561154 | - | 104 | Protein_3488 | protein MgtT | - |
| CPZ98_RS18140 (3561154) | 3561154..3561249 | - | 96 | WP_000901367.1 | protein MgtS | - |
| CPZ98_RS18145 (3561376) | 3561376..3562491 | - | 1116 | Protein_3490 | efflux MFS transporter YdeE | - |
| CPZ98_RS18150 (3562758) | 3562758..3563657 | + | 900 | WP_000087223.1 | O-acetylserine/cysteine exporter | - |
| CPZ98_RS18155 (3563688) | 3563688..3563906 | - | 219 | WP_000803659.1 | multiple antibiotic resistance protein MarB | - |
| CPZ98_RS18160 (3563938) | 3563938..3564321 | - | 384 | WP_000091199.1 | MDR efflux pump AcrAB transcriptional activator MarA | - |
| CPZ98_RS18165 (3564341) | 3564341..3564775 | - | 435 | WP_000843421.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| CPZ98_RS18170 (3564987) | 3564987..3565652 | + | 666 | WP_000885033.1 | NAAT family transporter MarC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|