MGE detailed information
MGE type: Mobilizable plasmid MGE length: 95515 bp
Accession: NZ_CP024255 Location: 1..95515 Organism: Escherichia coli strain ATCC 43886 Replicon: plasmid unnamed2
Accession: NZ_CP024255 Location: 1..95515 Organism: Escherichia coli strain ATCC 43886 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CS032_RS00830 () | 1391..2467 | + | 1077 | WP_001734574.1 | IS110 family transposase ISEc21 | Transposase |
| CS032_RS00835 () | 2484..2792 | + | 309 | Protein_2 | DDE-type integrase/transposase/recombinase | - |
| CS032_RS00840 () | 3525..3716 | + | 192 | WP_001736027.1 | hypothetical protein | - |
| CS032_RS00845 () | 3767..4453 | + | 687 | WP_024169890.1 | Chaperone protein FocC | VF |
| CS032_RS00850 () | 4465..6896 | + | 2432 | Protein_5 | fimbrial biogenesis outer membrane usher protein | - |
| CS032_RS00855 () | 7101..7478 | - | 378 | WP_024169891.1 | CFA/I fimbrial subunit D | VF |
| CS032_RS00865 () | 8403..9003 | - | 601 | Protein_7 | DUF2913 family protein | - |
| CS032_RS00870 () | 9543..10716 | + | 1174 | Protein_8 | IS21 family transposase IS21 | Transposase |
| CS032_RS00875 () | 10716..11513 | + | 798 | WP_001736034.1 | IS21 family transposase IS21 | Transposase |
| CS032_RS00880 () | 11573..11794 | - | 222 | Protein_10 | IS3 family transposase ISBmu11 | Transposase |
| CS032_RS27895 () | 11949..12299 | + | 351 | WP_071598273.1 | hypothetical protein | - |
| CS032_RS00890 () | 12581..13720 | + | 1140 | WP_001736036.1 | hypothetical protein | - |
| CS032_RS00895 () | 13717..14922 | + | 1206 | WP_001736038.1 | TolC family protein | - |
| CS032_RS00900 () | 14879..15652 | + | 774 | WP_050438176.1 | hypothetical protein | - |
| CS032_RS00905 () | 15645..16271 | + | 627 | WP_024169892.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| CS032_RS00910 () | 16524..16769 | + | 246 | Protein_16 | lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase | - |
| CS032_RS00915 () | 17141..17290 | - | 150 | WP_001399277.1 | IS21 family transposase IS100 | Transposase |
| CS032_RS00920 () | 17309..18552 | - | 1244 | Protein_18 | acyltransferase | - |
| CS032_RS00930 () | 19799..20581 | - | 783 | WP_099554528.1 | IS21 family transposase IS100kyp | Transposase |
| CS032_RS00935 () | 20578..21600 | - | 1023 | WP_000255946.1 | IS21 family transposase IS100kyp | Transposase |
| CS032_RS00945 () | 21699..22378 | + | 680 | Protein_21 | hypothetical protein | - |
| CS032_RS27900 () | 22574..22678 | + | 105 | Protein_22 | transposase | - |
| CS032_RS00955 () | 23010..23192 | - | 183 | WP_001470895.1 | hypothetical protein | - |
| CS032_RS00960 () | 23248..23772 | - | 525 | WP_024169893.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| CS032_RS00970 () | 23873..24550 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| CS032_RS00975 () | 24550..24897 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| CS032_RS00980 () | 24917..26488 | + | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| CS032_RS00990 () | 26652..27865 | + | 1214 | WP_164997625.1 | IS3 family transposase IS629 | Transposase |
| CS032_RS00995 () | 27908..28516 | + | 609 | Protein_29 | transposase | - |
| CS032_RS01000 () | 28530..28830 | + | 301 | Protein_30 | integrase core domain-containing protein | - |
| CS032_RS01005 () | 29050..29913 | - | 864 | WP_001734642.1 | Right origin-binding protein | VF |
| CS032_RS01010 () | 30032..30560 | - | 529 | Protein_32 | IS1 family transposase | - |
| CS032_RS01015 () | 31431..31622 | - | 192 | WP_024169750.1 | ANR family transcriptional regulator | - |
| CS032_RS01025 () | 31825..32622 | + | 798 | WP_001734638.1 | CFA/I fimbrial subunit D | VF |
| CS032_RS01035 () | 33265..34371 | + | 1107 | WP_032200404.1 | glycosyltransferase family 4 protein | - |
| CS032_RS01040 () | 34513..35967 | - | 1455 | Protein_36 | Tn3 family transposase TnpA_TnEc1 | Transposase |
| CS032_RS01050 () | 36021..36698 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| CS032_RS01055 () | 36698..37045 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| CS032_RS01060 () | 37065..38636 | + | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| CS032_RS01065 () | 38669..39492 | - | 824 | Protein_40 | Tn3 family transposase TnpA_TnEc1 | Transposase |
| CS032_RS01070 () | 39693..40333 | + | 641 | Protein_41 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| CS032_RS01075 () | 40655..41029 | - | 375 | WP_013188479.1 | Heat-labile enterotoxin B chain | VF |
| CS032_RS01080 () | 41026..41802 | - | 777 | WP_001734409.1 | Heat-labile enterotoxin A chain | VF |
| CS032_RS01085 () | 42037..42240 | + | 204 | Protein_44 | IS91 family transposase | - |
| CS032_RS01100 () | 43324..44181 | - | 858 | WP_001401515.1 | incFII family plasmid replication initiator RepA | - |
| CS032_RS01105 () | 44174..44248 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| CS032_RS01115 () | 44473..44733 | - | 261 | WP_000083817.1 | replication regulatory protein RepA | - |
| CS032_RS01125 () | 45257..46621 | + | 1365 | Protein_48 | IS21 family transposase ISEc12 | Transposase |
| CS032_RS01135 () | 47932..48492 | + | 561 | Protein_50 | IS21 family transposase ISEc12 | Transposase |
| CS032_RS01140 () | 48563..48742 | - | 180 | WP_032199711.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 48734..48790 | + | 57 | NuclAT_1 | - | Antitoxin Detail |
| - () | 48734..48790 | + | 57 | NuclAT_1 | - | Antitoxin Detail |
| - () | 48734..48790 | + | 57 | NuclAT_1 | - | Antitoxin Detail |
| - () | 48734..48790 | + | 57 | NuclAT_1 | - | Antitoxin Detail |
| CS032_RS01150 () | 49034..49216 | + | 183 | WP_001393357.1 | hypothetical protein | - |
| CS032_RS01155 () | 49440..50171 | - | 732 | WP_001734655.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| CS032_RS01160 () | 50168..50734 | - | 567 | WP_024169751.1 | DUF2726 domain-containing protein | - |
| CS032_RS01165 () | 50752..55734 | - | 4983 | Protein_55 | Multifunctional conjugation protein TraI | Relaxase |
| CS032_RS01170 () | 56104..57090 | - | 987 | WP_001734652.1 | conjugal transfer pilus assembly protein TraU | - |
| CS032_RS01175 () | 57087..57722 | - | 636 | WP_000286241.1 | type-F conjugative transfer system protein TraW | - |
| CS032_RS01180 () | 57725..58186 | - | 462 | WP_032199709.1 | type-F conjugative transfer system protein TrbI | - |
| CS032_RS01185 () | 58183..60774 | - | 2592 | WP_001735610.1 | type IV secretion system protein TraC | - |
| CS032_RS01190 () | 60785..61384 | - | 600 | WP_001735611.1 | type IV conjugative transfer system lipoprotein TraV | - |
| CS032_RS01195 () | 61491..61715 | - | 225 | WP_001735612.1 | TraR/DksA C4-type zinc finger protein | - |
| CS032_RS01200 () | 61827..63191 | - | 1365 | WP_001735613.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| CS032_RS01205 () | 63178..63918 | - | 741 | WP_099554542.1 | type-F conjugative transfer system secretin TraK | - |
| CS032_RS01210 () | 63908..64471 | - | 564 | WP_000406019.1 | type IV conjugative transfer system protein TraE | - |
| CS032_RS01215 () | 64491..64796 | - | 306 | WP_001735616.1 | type IV conjugative transfer system protein TraL | - |
| CS032_RS01220 () | 64798..65156 | - | 359 | Protein_66 | type IV conjugative transfer system pilin TraA | - |
| CS032_RS27640 () | 65254..65421 | - | 168 | WP_157187929.1 | hypothetical protein | - |
| CS032_RS01225 () | 65637..65918 | - | 282 | WP_000974581.1 | hypothetical protein | - |
| CS032_RS01230 () | 66398..66784 | - | 387 | WP_024169848.1 | relaxosome protein TraM | - |
| CS032_RS01240 () | 67411..68573 | + | 1163 | WP_099554545.1 | IS3 family transposase IS3 | Transposase |
| CS032_RS01245 () | 68611..68697 | + | 87 | WP_071594256.1 | IS3 family transposase | - |
| CS032_RS01250 () | 68735..68821 | + | 87 | WP_071594245.1 | IS3 family transposase | - |
| CS032_RS01255 () | 68853..68945 | + | 93 | Protein_73 | integrase core domain-containing protein | - |
| CS032_RS01260 () | 68983..69069 | + | 87 | WP_071594245.1 | IS3 family transposase | - |
| CS032_RS01265 () | 69207..69671 | + | 465 | WP_001735678.1 | CS6 fimbrial subunit A | VF |
| CS032_RS01270 () | 69689..70192 | + | 504 | WP_001297627.1 | CS6 fimbrial subunit CssB | - |
| CS032_RS01275 () | 70245..70943 | + | 699 | WP_024169853.1 | Chaperone protein caf1M | VF |
| CS032_RS01280 () | 70900..73359 | + | 2460 | WP_157195932.1 | CS6 fimbrial usher CssD | - |
| CS032_RS01290 () | 73674..74234 | - | 561 | Protein_79 | IS3 family transposase ISLad1 | Transposase |
| CS032_RS01295 () | 74296..76259 | + | 1964 | Protein_80 | ParB/RepB/Spo0J family partition protein | - |
| CS032_RS01300 () | 76314..76748 | + | 435 | WP_000845954.1 | conjugation system SOS inhibitor PsiB | - |
| CS032_RS01305 () | 76745..77464 | + | 720 | WP_001734594.1 | plasmid SOS inhibition protein A | - |
| - () | 77476..77670 | + | 195 | NuclAT_0 | - | Antitoxin Detail |
| - () | 77476..77670 | + | 195 | NuclAT_0 | - | Antitoxin Detail |
| - () | 77476..77670 | + | 195 | NuclAT_0 | - | Antitoxin Detail |
| - () | 77476..77670 | + | 195 | NuclAT_0 | - | Antitoxin Detail |
| CS032_RS01315 () | 77735..77893 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| CS032_RS01320 () | 78187..79758 | - | 1572 | WP_099554548.1 | IS66 family transposase IS679 | Transposase |
| CS032_RS01325 () | 79778..80125 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| CS032_RS01330 () | 80125..80802 | - | 678 | WP_099554551.1 | IS66 family transposase ISCro1 | Transposase |
| CS032_RS27905 () | 81112..81303 | + | 192 | Protein_87 | hypothetical protein | - |
| CS032_RS01345 () | 81356..82033 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| CS032_RS01350 () | 82033..82380 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| CS032_RS01355 () | 82400..83971 | + | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| CS032_RS01360 () | 84157..88251 | - | 4095 | WP_032200419.1 | Serine protease EatA | VF |
| CS032_RS01365 () | 88530..89224 | + | 695 | WP_088563528.1 | IS1 family transposase IS1N | Transposase |
| CS032_RS01375 () | 89742..90955 | + | 1214 | WP_164997627.1 | IS3 family transposase IS629 | Transposase |
| CS032_RS01380 () | 91000..92036 | + | 1037 | Protein_94 | IS3 family transposase IS3 | Transposase |
| CS032_RS01385 () | 92181..92597 | - | 417 | WP_001735279.1 | plasmid partitioning/stability family protein | - |
| CS032_RS01390 () | 92634..93569 | - | 936 | WP_207207470.1 | plasmid segregation protein ParM | - |
| CS032_RS01395 () | 93981..94289 | - | 309 | WP_001735282.1 | hypothetical protein | - |
| CS032_RS01400 () | 94379..95020 | - | 642 | WP_001735283.1 | ParA family protein | - |
| CS032_RS01405 () | 95201..95401 | - | 201 | Protein_99 | tyrosine-type recombinase/integrase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|