MGE detailed information
MGE type: Prophage MGE length: 40827 bp
Accession: NZ_CP023741 Location: 3565009..3605835 Organism: Sphingobium yanoikuyae strain S72 Replicon: chromosome
Accession: NZ_CP023741 Location: 3565009..3605835 Organism: Sphingobium yanoikuyae strain S72 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A6768_RS16470 () | 3561045..3562478 | + | 1434 | WP_097384341.1 | M20/M25/M40 family metallo-hydrolase | - |
| A6768_RS16475 () | 3562541..3562933 | - | 393 | WP_097384342.1 | hypothetical protein | - |
| A6768_RS16480 () | 3563108..3563671 | - | 564 | WP_097384343.1 | hypothetical protein | - |
| A6768_RS16485 () | 3563664..3565016 | - | 1353 | WP_017498979.1 | HAMP domain-containing histidine kinase | - |
| A6768_RS16490 () | 3565009..3565707 | - | 699 | WP_010338308.1 | Regulator of RpoS | VF |
| A6768_RS16495 () | 3565938..3566768 | - | 831 | WP_004208288.1 | sulfite exporter TauE/SafE family protein | - |
| A6768_RS16500 () | 3567129..3568244 | - | 1116 | WP_097384344.1 | alanine dehydrogenase | - |
| A6768_RS16505 () | 3568420..3568887 | + | 468 | WP_069338080.1 | Lrp/AsnC family transcriptional regulator | - |
| A6768_RS16510 () | 3568884..3569786 | - | 903 | WP_097384345.1 | peptidylprolyl isomerase | - |
| A6768_RS16520 () | 3570148..3571509 | + | 1362 | WP_097384346.1 | hypothetical protein ; Integrase | Integrase |
| A6768_RS16525 () | 3571513..3571701 | - | 189 | WP_097384347.1 | AlpA family phage regulatory protein | - |
| A6768_RS16530 () | 3571698..3572147 | - | 450 | WP_097384348.1 | hypothetical protein | - |
| A6768_RS16535 () | 3572144..3572650 | - | 507 | WP_097384349.1 | hypothetical protein | - |
| A6768_RS16540 () | 3572647..3572844 | - | 198 | WP_150131259.1 | hypothetical protein | - |
| A6768_RS16545 () | 3572847..3573200 | - | 354 | WP_097385718.1 | DUF2312 domain-containing protein | - |
| A6768_RS16550 () | 3573257..3575968 | - | 2712 | WP_097384351.1 | toprim domain-containing protein | - |
| A6768_RS16555 () | 3576067..3576303 | - | 237 | WP_172438711.1 | ogr/Delta-like zinc finger family protein | - |
| A6768_RS16560 () | 3576364..3576852 | - | 489 | WP_097384353.1 | hypothetical protein | - |
| A6768_RS16565 () | 3576849..3577067 | - | 219 | WP_097384354.1 | hypothetical protein | - |
| A6768_RS25980 () | 3577064..3577327 | - | 264 | WP_150131260.1 | hypothetical protein | - |
| A6768_RS16570 () | 3577327..3577656 | - | 330 | WP_097384355.1 | helix-turn-helix domain-containing protein | - |
| A6768_RS16575 () | 3577742..3578416 | + | 675 | WP_097384356.1 | helix-turn-helix transcriptional regulator | - |
| A6768_RS16580 () | 3578416..3578838 | + | 423 | WP_097384357.1 | HIRAN domain-containing protein | - |
| A6768_RS25985 () | 3578816..3579223 | + | 408 | WP_150131261.1 | hypothetical protein | - |
| A6768_RS16585 () | 3579408..3579704 | + | 297 | WP_097384358.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| A6768_RS16590 () | 3579742..3580023 | + | 282 | WP_097385719.1 | putative addiction module antidote protein | Antitoxin Detail |
| A6768_RS16595 () | 3580024..3581034 | - | 1011 | WP_097384359.1 | late control protein | - |
| A6768_RS16600 () | 3581031..3581444 | - | 414 | WP_097385720.1 | phage tail protein | - |
| A6768_RS16605 () | 3581450..3583852 | - | 2403 | WP_097384360.1 | phage tail tape measure protein | - |
| A6768_RS16610 () | 3583852..3583992 | - | 141 | WP_097384361.1 | GpE family phage tail protein | - |
| A6768_RS16615 () | 3584001..3584312 | - | 312 | WP_097384362.1 | phage tail assembly protein | - |
| A6768_RS16620 () | 3584373..3584885 | - | 513 | WP_097384363.1 | phage major tail tube protein | - |
| A6768_RS16625 () | 3584927..3586102 | - | 1176 | WP_097384364.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| A6768_RS16630 () | 3586117..3586467 | - | 351 | WP_097384365.1 | GPW/gp25 family protein | - |
| A6768_RS16635 () | 3586467..3587039 | - | 573 | WP_097385721.1 | phage baseplate assembly protein V | - |
| A6768_RS25990 () | 3587577..3588140 | - | 564 | WP_150131262.1 | hypothetical protein | - |
| A6768_RS16640 () | 3588264..3590429 | - | 2166 | WP_097384366.1 | hypothetical protein | - |
| A6768_RS16645 () | 3590433..3590897 | - | 465 | WP_097384367.1 | hypothetical protein | - |
| A6768_RS16650 () | 3590900..3591958 | - | 1059 | WP_097384368.1 | hypothetical protein | - |
| A6768_RS16655 () | 3591961..3592602 | - | 642 | WP_097384369.1 | phage tail protein I | - |
| A6768_RS16660 () | 3592599..3593492 | - | 894 | WP_097384370.1 | baseplate J/gp47 family protein | - |
| A6768_RS16665 () | 3593736..3594353 | - | 618 | WP_097384371.1 | hypothetical protein | - |
| A6768_RS16670 () | 3594337..3595419 | - | 1083 | WP_097384372.1 | DUF262 domain-containing protein | - |
| A6768_RS16675 () | 3595572..3596243 | - | 672 | WP_097384373.1 | phage virion morphogenesis protein | - |
| A6768_RS16680 () | 3596240..3596722 | - | 483 | WP_097384374.1 | phage tail protein | - |
| A6768_RS16685 () | 3596725..3596910 | - | 186 | WP_097385722.1 | hypothetical protein | - |
| A6768_RS16690 () | 3596855..3597244 | - | 390 | WP_097384375.1 | hypothetical protein | - |
| A6768_RS16695 () | 3597241..3597780 | - | 540 | WP_097384376.1 | glycoside hydrolase family 108 protein | - |
| A6768_RS16700 () | 3597784..3598116 | - | 333 | WP_097384377.1 | hypothetical protein | - |
| A6768_RS16705 () | 3598120..3598344 | - | 225 | WP_097384378.1 | tail protein X | - |
| A6768_RS16710 () | 3598344..3598826 | - | 483 | WP_097384379.1 | head completion/stabilization protein | - |
| A6768_RS16715 () | 3598823..3599089 | - | 267 | WP_150131264.1 | hypothetical protein | - |
| A6768_RS16720 () | 3599214..3600083 | - | 870 | WP_097384381.1 | terminase | - |
| A6768_RS16725 () | 3600126..3601178 | - | 1053 | WP_097384382.1 | phage major capsid protein, P2 family | - |
| A6768_RS16730 () | 3601219..3602070 | - | 852 | WP_097384383.1 | GPO family capsid scaffolding protein | - |
| A6768_RS16735 () | 3602232..3604088 | + | 1857 | WP_097384384.1 | terminase family protein | - |
| A6768_RS16740 () | 3604085..3605152 | + | 1068 | WP_097384385.1 | phage portal protein | - |
| A6768_RS16750 () | 3606947..3608179 | - | 1233 | WP_097385723.1 | FAD-dependent oxidoreductase | - |
| A6768_RS16755 () | 3608185..3609387 | - | 1203 | WP_097384387.1 | 3-oxoadipyl-CoA thiolase | - |
| A6768_RS16760 () | 3609393..3610163 | - | 771 | WP_097384388.1 | 3-oxoadipate enol-lactonase | - |
| A6768_RS16765 () | 3610166..3610483 | - | 318 | WP_097384389.1 | 2Fe-2S iron-sulfur cluster binding domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|