MGE detailed information
MGE type: Prophage MGE length: 48469 bp
Accession: NZ_CP022902 Location: 2003920..2052388 Organism: Staphylococcus aureus strain 165 Replicon: chromosome
Accession: NZ_CP022902 Location: 2003920..2052388 Organism: Staphylococcus aureus strain 165 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CGP98_RS10415 () | 1999022..1999858 | - | 837 | WP_000886468.1 | membrane protein | - |
| CGP98_RS10420 () | 1999867..2001384 | - | 1518 | WP_000535834.1 | ABC transporter ATP-binding protein | - |
| CGP98_RS10425 () | 2001399..2001713 | - | 315 | WP_000435806.1 | YfhH family protein | - |
| CGP98_RS10430 () | 2001691..2002509 | - | 819 | WP_001124419.1 | recombination regulator RecX | - |
| CGP98_RS10435 () | 2002770..2003579 | - | 810 | WP_000830380.1 | monofunctional peptidoglycan glycosyltransferase SgtB | - |
| CGP98_RS10440 () | 2003920..2004435 | - | 516 | WP_000163283.1 | type 1 glutamine amidotransferase | - |
| CGP98_RS10445 () | 2004566..2004727 | - | 162 | WP_001005407.1 | hypothetical protein | - |
| CGP98_RS10450 () | 2005074..2005154 | + | 81 | WP_100250272.1 | hypothetical protein | - |
| CGP98_RS10455 () | 2005200..2005883 | - | 684 | WP_000180531.1 | hypothetical protein | - |
| CGP98_RS10460 () | 2005880..2006062 | - | 183 | WP_000990948.1 | hypothetical protein | - |
| CGP98_RS10465 () | 2006285..2007209 | - | 925 | Protein_1923 | hypothetical protein | - |
| CGP98_RS10475 () | 2007828..2009282 | - | 1455 | WP_031924639.1 | N-acetylmuramoyl-L-alanine amidase | - |
| CGP98_RS10480 () | 2009293..2009595 | - | 303 | WP_000339141.1 | phage holin | - |
| CGP98_RS10485 () | 2009731..2010030 | - | 300 | WP_000466784.1 | DUF2951 domain-containing protein | - |
| CGP98_RS10490 () | 2010076..2010240 | - | 165 | WP_000916020.1 | XkdX family protein | - |
| CGP98_RS10495 () | 2010233..2010622 | - | 390 | WP_001166599.1 | DUF2977 domain-containing protein | - |
| CGP98_RS10500 () | 2010622..2012088 | - | 1467 | WP_115276633.1 | BppU family phage baseplate upper protein | - |
| CGP98_RS10505 () | 2012088..2013998 | - | 1911 | WP_000429558.1 | minor structural protein | - |
| CGP98_RS10510 () | 2014014..2014304 | - | 291 | WP_000179858.1 | hypothetical protein | - |
| CGP98_RS10515 () | 2014304..2015887 | - | 1584 | WP_000384474.1 | prophage endopeptidase tail family protein | - |
| CGP98_RS10520 () | 2015896..2016720 | - | 825 | WP_001190533.1 | phage tail family protein | - |
| CGP98_RS10525 () | 2016720..2022920 | - | 6201 | WP_031860857.1 | phage tail tape measure protein | - |
| CGP98_RS10530 () | 2022934..2023092 | - | 159 | WP_000438833.1 | hypothetical protein | - |
| CGP98_RS10535 () | 2023134..2023484 | - | 351 | WP_000589167.1 | hypothetical protein | - |
| CGP98_RS10540 () | 2023542..2023997 | - | 456 | WP_000169127.1 | Ig domain-containing protein | - |
| CGP98_RS10545 () | 2024089..2024730 | - | 642 | WP_000807536.1 | tail protein | - |
| CGP98_RS10550 () | 2024765..2025160 | - | 396 | WP_001023802.1 | DUF3168 domain-containing protein | - |
| CGP98_RS10555 () | 2025161..2025562 | - | 402 | WP_000110020.1 | hypothetical protein | - |
| CGP98_RS10560 () | 2025559..2025891 | - | 333 | WP_000395501.1 | hypothetical protein | - |
| CGP98_RS10565 () | 2025903..2026181 | - | 279 | WP_000050973.1 | head-tail connector protein | - |
| CGP98_RS10570 () | 2026250..2027413 | - | 1164 | WP_001142739.1 | phage major capsid protein | - |
| CGP98_RS10575 () | 2027425..2028198 | - | 774 | WP_115276634.1 | Clp protease ClpP | - |
| CGP98_RS10580 () | 2028182..2029420 | - | 1239 | WP_001100669.1 | phage portal protein | - |
| CGP98_RS10585 () | 2029425..2031116 | - | 1692 | WP_115276635.1 | terminase large subunit | - |
| CGP98_RS10590 () | 2031106..2031411 | - | 306 | WP_000778932.1 | P27 family phage terminase small subunit | - |
| CGP98_RS10595 () | 2031540..2031854 | - | 315 | WP_015978060.1 | HNH endonuclease | - |
| CGP98_RS10600 () | 2032011..2032448 | - | 438 | WP_031883903.1 | transcriptional regulator | - |
| CGP98_RS10605 () | 2032461..2033828 | - | 1368 | WP_115276660.1 | DEAD/DEAH box helicase | - |
| CGP98_RS10610 () | 2033809..2034099 | - | 291 | WP_000665205.1 | VRR-NUC domain-containing protein | - |
| CGP98_RS10615 () | 2034233..2034337 | + | 105 | WP_015978074.1 | hypothetical protein | - |
| CGP98_RS10620 () | 2034440..2036887 | - | 2448 | WP_115276637.1 | virulence-associated E family protein | - |
| CGP98_RS10625 () | 2036940..2037140 | - | 201 | WP_000265258.1 | DUF1514 family protein | - |
| CGP98_RS10630 () | 2037208..2037360 | - | 153 | WP_000595237.1 | transcriptional activator RinB | - |
| CGP98_RS10635 () | 2037353..2037589 | - | 237 | WP_000483477.1 | hypothetical protein | - |
| CGP98_RS10640 () | 2037614..2037850 | - | 237 | WP_000195806.1 | DUF1381 domain-containing protein | - |
| CGP98_RS10645 () | 2037887..2038423 | - | 537 | WP_000185703.1 | dUTPase | - |
| CGP98_RS10650 () | 2038416..2038598 | - | 183 | WP_000028425.1 | hypothetical protein | Antitoxin Detail |
| CGP98_RS10655 () | 2038588..2038839 | - | 252 | WP_001065110.1 | DUF1024 family protein | Toxin Detail |
| CGP98_RS10660 () | 2038854..2039102 | - | 249 | WP_000177805.1 | phi PVL orf 51-like protein | - |
| CGP98_RS10665 () | 2039102..2039356 | - | 255 | WP_000111495.1 | DUF3310 domain-containing protein | - |
| CGP98_RS10670 () | 2039356..2039715 | - | 360 | WP_000117792.1 | hypothetical protein | - |
| CGP98_RS10675 () | 2039716..2039901 | - | 186 | WP_001187264.1 | DUF3113 family protein | - |
| CGP98_RS10680 () | 2039901..2040308 | - | 408 | WP_000401950.1 | RusA family crossover junction endodeoxyribonuclease | - |
| CGP98_RS10685 () | 2040318..2040539 | - | 222 | WP_001123684.1 | DUF3269 family protein | - |
| CGP98_RS10690 () | 2040552..2040710 | - | 159 | WP_000628839.1 | hypothetical protein | - |
| CGP98_RS10695 () | 2040707..2041492 | - | 786 | WP_114647922.1 | ATP-binding protein | - |
| CGP98_RS10700 () | 2041505..2042236 | - | 732 | WP_000132048.1 | helix-turn-helix domain-containing protein | - |
| CGP98_RS10710 () | 2042301..2042582 | + | 282 | WP_000414755.1 | hypothetical protein | - |
| CGP98_RS15375 () | 2042575..2042724 | - | 150 | WP_001081076.1 | hypothetical protein | - |
| CGP98_RS10715 () | 2042721..2043395 | - | 675 | WP_031928974.1 | phi PV83 orf 19-like protein | - |
| CGP98_RS10720 () | 2043407..2043850 | - | 444 | WP_001099010.1 | single-stranded DNA-binding protein | - |
| CGP98_RS10725 () | 2043847..2044497 | - | 651 | WP_000840496.1 | ERF family protein | - |
| CGP98_RS10730 () | 2044498..2045034 | - | 537 | WP_000999048.1 | host-nuclease inhibitor Gam family protein | - |
| CGP98_RS10735 () | 2045047..2045307 | - | 261 | WP_000291075.1 | hypothetical protein ; Integrase | Integrase |
| CGP98_RS10740 () | 2045399..2045560 | - | 162 | WP_000066014.1 | DUF1270 domain-containing protein | - |
| CGP98_RS10745 () | 2045553..2045774 | - | 222 | WP_000594791.1 | hypothetical protein | - |
| CGP98_RS10750 () | 2045845..2046498 | + | 654 | WP_001803402.1 | hypothetical protein | - |
| CGP98_RS10755 () | 2046508..2046651 | - | 144 | WP_000939499.1 | hypothetical protein | - |
| CGP98_RS10760 () | 2046667..2047419 | - | 753 | WP_001148634.1 | phage antirepressor KilAC domain-containing protein | - |
| CGP98_RS10765 () | 2047421..2047606 | - | 186 | WP_000933365.1 | helix-turn-helix transcriptional regulator | - |
| CGP98_RS10770 () | 2048052..2048534 | + | 483 | WP_000394410.1 | hypothetical protein | - |
| CGP98_RS10775 () | 2048635..2048814 | - | 180 | WP_033861758.1 | hypothetical protein | - |
| CGP98_RS10780 () | 2048829..2049272 | - | 444 | WP_115276661.1 | hypothetical protein | - |
| CGP98_RS10785 () | 2049320..2049532 | - | 213 | WP_000213811.1 | helix-turn-helix transcriptional regulator | - |
| CGP98_RS10790 () | 2049684..2050415 | + | 732 | WP_020807995.1 | XRE family transcriptional regulator | - |
| CGP98_RS10795 () | 2050451..2051131 | + | 681 | WP_000392109.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| CGP98_RS10800 () | 2051342..2052388 | + | 1047 | WP_001145721.1 | Putative defective protein IntQ ; Integrase | Integrase |
| CGP98_RS10805 () | 2052433..2053578 | + | 1146 | WP_001245442.1 | radical SAM/CxCxxxxC motif protein YfkAB | - |
| CGP98_RS10810 () | 2053838..2054368 | - | 531 | WP_000184383.1 | acyl-CoA thioesterase | - |
| CGP98_RS10815 () | 2054458..2055714 | - | 1257 | WP_001795438.1 | aminopeptidase | - |
| CGP98_RS10820 () | 2055717..2055917 | - | 201 | WP_000180461.1 | DUF1128 family protein | - |
| CGP98_RS10825 () | 2056064..2056528 | + | 465 | WP_000228666.1 | low molecular weight phosphotyrosine protein phosphatase | - |
| CGP98_RS10830 () | 2056535..2056810 | + | 276 | WP_000428172.1 | YtxH domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|