MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 40363 bp
Accession: NZ_CP022578 Location: 429886..470248 Organism: Mycobacterium tuberculosis strain WC059 Replicon: chromosome
Accession: NZ_CP022578 Location: 429886..470248 Organism: Mycobacterium tuberculosis strain WC059 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CHR52_RS02015 () | 425274..425996 | + | 723 | WP_003912014.1 | CRISPR-associated endoribonuclease Cas6 | - |
| CHR52_RS02020 () | 425993..428431 | + | 2439 | WP_003900580.1 | type III-A CRISPR-associated protein Cas10/Csm1 | - |
| CHR52_RS02025 () | 428428..428802 | + | 375 | WP_003414296.1 | type III-A CRISPR-associated protein Csm2 | - |
| CHR52_RS02030 () | 428812..429522 | + | 711 | WP_003414292.1 | type III-A CRISPR-associated RAMP protein Csm3 | - |
| CHR52_RS02035 () | 429503..429847 | + | 345 | Protein_384 | type III-A CRISPR-associated RAMP protein Csm4 | - |
| CHR52_RS02045 () | 432475..433287 | - | 813 | WP_003899491.1 | hypothetical protein | VF |
| CHR52_RS02050 () | 433284..434693 | - | 1410 | WP_003414198.1 | IS481 family transposase ISGur11 | Transposase |
| CHR52_RS02055 () | 434764..435372 | - | 609 | WP_003414195.1 | hypothetical protein | - |
| CHR52_RS02060 () | 435537..435770 | + | 234 | Protein_389 | transposase | - |
| CHR52_RS02065 () | 435792..436103 | - | 312 | WP_003414190.1 | hypothetical protein | - |
| CHR52_RS02070 () | 436208..436465 | - | 258 | WP_003899489.1 | hypothetical protein | - |
| CHR52_RS02075 () | 436699..437853 | - | 1155 | WP_003899488.1 | ISNCY family transposase ISKol11 | Transposase |
| CHR52_RS02080 () | 438052..438243 | - | 192 | WP_003414184.1 | hypothetical protein | - |
| CHR52_RS02085 () | 438240..438644 | - | 405 | WP_003414181.1 | ISNCY family transposase ISLbi1 | Transposase |
| CHR52_RS21655 () | 438792..439046 | + | 255 | WP_003917684.1 | hypothetical protein | - |
| CHR52_RS02095 () | 439222..439497 | - | 276 | WP_003911993.1 | DUF1778 domain-containing protein | - |
| CHR52_RS02100 () | 439688..440731 | + | 1044 | WP_003414172.1 | DUF2293 domain-containing protein | - |
| CHR52_RS02105 () | 440774..441004 | + | 231 | WP_003901465.1 | antitoxin MazE | Antitoxin Detail |
| CHR52_RS02110 () | 440988..441344 | + | 357 | WP_003414166.1 | type II toxin-antitoxin system toxin endoribonuclease MazF9 | Toxin Detail |
| CHR52_RS02115 () | 441446..443095 | - | 1650 | WP_003899485.1 | CocE/NonD family hydrolase | - |
| CHR52_RS02120 () | 443114..443743 | - | 630 | WP_003414158.1 | DUF3558 family protein | - |
| CHR52_RS02125 () | 443874..444200 | + | 327 | WP_003414157.1 | hypothetical protein | - |
| CHR52_RS02130 () | 444204..445892 | + | 1689 | WP_003414155.1 | alpha/beta hydrolase family protein | - |
| CHR52_RS02135 () | 445892..446455 | + | 564 | WP_003900574.1 | LppA family lipoprotein | - |
| CHR52_RS02140 () | 446600..447574 | + | 975 | WP_003414151.1 | metallophosphoesterase | - |
| CHR52_RS02145 () | 447571..448254 | + | 684 | WP_003414149.1 | 4'-phosphopantetheinyl transferase | - |
| CHR52_RS02150 () | 448251..449147 | + | 897 | WP_003414147.1 | tRNA pseudouridine(55) synthase TruB | - |
| CHR52_RS02155 () | 449349..449930 | + | 582 | WP_003414146.1 | IS607 family transposase IS1602 | Transposase |
| CHR52_RS02160 () | 449930..451309 | + | 1380 | WP_003899482.1 | IS607 family transposase IS1602 | Transposase |
| CHR52_RS02165 () | 451342..452547 | + | 1206 | WP_003414142.1 | lipid-transfer protein | - |
| CHR52_RS02170 () | 452573..453805 | + | 1233 | WP_003414139.1 | Acyl-CoA dehydrogenase | VF |
| CHR52_RS02175 () | 453866..454552 | - | 687 | WP_003414136.1 | Iron-dependent repressor IdeR | VF |
| CHR52_RS02180 () | 454637..456400 | - | 1764 | WP_003414134.1 | ESX-1 secretion-associated protein EspI | VF |
| CHR52_RS02185 () | 456611..457606 | + | 996 | WP_003414131.1 | bifunctional riboflavin kinase/FAD synthetase | - |
| CHR52_RS02190 () | 457763..458032 | + | 270 | WP_003414128.1 | 30S ribosomal protein S15 | - |
| CHR52_RS02195 () | 458045..458560 | + | 516 | WP_003899480.1 | hypothetical protein | - |
| CHR52_RS02200 () | 458914..461172 | + | 2259 | WP_003414124.1 | polyribonucleotide nucleotidyltransferase | - |
| CHR52_RS02205 () | 461150..462466 | + | 1317 | WP_003414119.1 | insulinase family protein | - |
| CHR52_RS02210 () | 462527..463561 | + | 1035 | WP_003899478.1 | nitronate monooxygenase | - |
| CHR52_RS02215 () | 463576..464691 | - | 1116 | WP_106420768.1 | alanine dehydrogenase | - |
| CHR52_RS02220 () | 464757..465296 | + | 540 | WP_003899476.1 | Lrp/AsnC family transcriptional regulator | - |
| CHR52_RS02225 () | 465328..465798 | + | 471 | WP_003899475.1 | SRPBCC family protein | - |
| CHR52_RS02230 () | 465956..467026 | + | 1071 | WP_003414107.1 | metal-dependent hydrolase | - |
| CHR52_RS02235 () | 467208..468137 | + | 930 | WP_003414104.1 | PDR/VanB family oxidoreductase | - |
| CHR52_RS02240 () | 468141..468602 | - | 462 | WP_003414102.1 | GNAT family N-acetyltransferase | - |
| CHR52_RS02245 () | 468755..468937 | + | 183 | Protein_426 | hypothetical protein | - |
| CHR52_RS02250 () | 468987..470248 | + | 1262 | WP_087902221.1 | IS3 family transposase IS987 | Transposase |
| CHR52_RS02255 () | 470245..470517 | + | 273 | WP_106420770.1 | hypothetical protein | - |
| CHR52_RS02260 () | 470528..471265 | + | 738 | WP_003414099.1 | 4-hydroxy-tetrahydrodipicolinate reductase | - |
| CHR52_RS02265 () | 471277..471750 | + | 474 | WP_003414097.1 | hypothetical protein | - |
| CHR52_RS02270 () | 471836..472288 | + | 453 | WP_003414091.1 | flavodoxin family protein | - |
| CHR52_RS02275 () | 472412..473560 | + | 1149 | WP_003414088.1 | PPE family protein | - |
| CHR52_RS02280 () | 473884..474711 | + | 828 | WP_003905925.1 | PE domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|