MGE detailed information
MGE type: Genomic_island MGE length: 83909 bp
Accession: NZ_CP022229 Location: 1098303..1182211 Organism: Escherichia coli strain WCHEC96200 Replicon: chromosome
Accession: NZ_CP022229 Location: 1098303..1182211 Organism: Escherichia coli strain WCHEC96200 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DBR04_RS07210 () | 1093674..1094858 | + | 1185 | WP_001218742.1 | tyrosine-type recombinase/integrase | - |
| DBR04_RS07215 () | 1095008..1096018 | + | 1011 | WP_000053331.1 | substrate-binding domain-containing protein | - |
| DBR04_RS07220 () | 1096114..1098240 | + | 2127 | WP_000253907.1 | alpha-galactosidase | - |
| DBR04_RS07225 () | 1098303..1099580 | + | 1278 | WP_001083368.1 | MFS transporter | - |
| DBR04_RS07230 () | 1099577..1101010 | + | 1434 | WP_024144973.1 | glycoside hydrolase family 32 protein | - |
| DBR04_RS07235 () | 1101205..1102599 | + | 1395 | WP_001037798.1 | carbohydrate porin | - |
| DBR04_RS26825 () | 1103177..1103464 | - | 288 | Protein_1033 | transposase | - |
| DBR04_RS07245 () | 1103453..1103814 | - | 362 | Protein_1034 | IS1 family transposase IS1A | Transposase |
| DBR04_RS07250 () | 1103864..1104898 | + | 1035 | WP_032153697.1 | tetratricopeptide repeat family protein | - |
| DBR04_RS07255 () | 1105042..1106715 | - | 1674 | WP_025492097.1 | phosphoethanolamine transferase | - |
| DBR04_RS07265 () | 1106768..1106965 | - | 198 | WP_001238004.1 | hypothetical protein | - |
| DBR04_RS07270 () | 1107105..1107371 | - | 267 | WP_000766274.1 | YkgJ family cysteine cluster protein | - |
| DBR04_RS07275 () | 1107368..1108939 | - | 1572 | WP_001100182.1 | ATP--cob(I)alamin adenosyltransferase | - |
| DBR04_RS07280 () | 1108986..1110065 | - | 1080 | WP_001207396.1 | hypothetical protein | - |
| DBR04_RS07285 () | 1110114..1111010 | - | 897 | WP_000228490.1 | WYL domain-containing protein | - |
| DBR04_RS07290 () | 1111430..1112167 | - | 738 | WP_001398114.1 | porin family protein | - |
| DBR04_RS07295 () | 1112346..1112575 | + | 230 | Protein_1043 | integrase | - |
| DBR04_RS07300 () | 1112798..1113694 | - | 897 | WP_000499115.1 | hypothetical protein | - |
| DBR04_RS07305 () | 1113694..1115316 | - | 1623 | WP_000778955.1 | AAA family ATPase | - |
| DBR04_RS07310 () | 1115325..1116467 | - | 1143 | WP_000742120.1 | restriction endonuclease subunit S | - |
| DBR04_RS07315 () | 1116464..1118098 | - | 1635 | WP_000627728.1 | type I restriction-modification system subunit M | - |
| DBR04_RS07320 () | 1118162..1121575 | - | 3414 | WP_000438165.1 | DEAD/DEAH box helicase family protein | - |
| DBR04_RS07330 () | 1122183..1122697 | + | 515 | Protein_1049 | ISL3 family transposase ISEc38 | Transposase |
| DBR04_RS07335 () | 1122997..1123263 | - | 267 | WP_032153698.1 | MazG-like family protein | - |
| DBR04_RS07345 () | 1123730..1124812 | + | 1083 | WP_000637419.1 | XRE family transcriptional regulator | - |
| DBR04_RS07350 () | 1124815..1125759 | - | 945 | WP_000820616.1 | hypothetical protein | - |
| DBR04_RS07355 () | 1125756..1126736 | - | 981 | WP_000174035.1 | thymidylate synthase | - |
| DBR04_RS07360 () | 1126904..1128065 | + | 1162 | Protein_1054 | IS3 family transposase IS3 | Transposase |
| DBR04_RS07365 () | 1128216..1129448 | + | 1233 | WP_000271619.1 | dNTP triphosphohydrolase | - |
| DBR04_RS07375 () | 1129899..1130162 | - | 264 | Protein_1056 | Pap fimbrial major pilin protein | VF |
| DBR04_RS07380 () | 1130369..1130683 | - | 315 | WP_000930062.1 | Major pilu subunit operon regulatory protein PapB | VF |
| DBR04_RS07395 () | 1131106..1131384 | + | 279 | WP_001349530.1 | P fimbrial regulatory protein KS71A | VF |
| DBR04_RS07400 () | 1131318..1131974 | + | 657 | Protein_1059 | IS91-like element ISVsa3 family transposase | - |
| DBR04_RS07405 () | 1132005..1132889 | + | 885 | WP_021598067.1 | DUF3363 domain-containing protein | - |
| DBR04_RS07410 () | 1133106..1134320 | + | 1215 | WP_023300759.1 | Bicyclomycin resistance protein | ARG |
| DBR04_RS07415 () | 1134348..1134653 | + | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| DBR04_RS07420 () | 1134765..1134953 | + | 189 | Protein_1063 | IS91 family transposase | - |
| DBR04_RS07425 () | 1134920..1136119 | - | 1200 | WP_032153701.1 | Tetracycline resistance protein, class C | ARG |
| DBR04_RS07430 () | 1136225..1136875 | + | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| DBR04_RS07435 () | 1136907..1137149 | - | 243 | WP_000844627.1 | transposase | - |
| DBR04_RS07445 () | 1137455..1138291 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| DBR04_RS07450 () | 1138291..1139094 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| DBR04_RS07455 () | 1139155..1139970 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| DBR04_RS07465 () | 1140211..1140777 | - | 567 | WP_000919994.1 | hypothetical protein | - |
| DBR04_RS07480 () | 1141628..1141741 | - | 114 | WP_131501864.1 | transposase | - |
| DBR04_RS07485 () | 1142004..1142180 | - | 177 | Protein_1072 | transketolase family protein | - |
| DBR04_RS07490 () | 1142240..1142931 | + | 692 | Protein_1073 | IS1 family transposase | - |
| DBR04_RS07505 () | 1144670..1144861 | + | 192 | WP_001323513.1 | hypothetical protein | - |
| DBR04_RS07510 () | 1144930..1145178 | + | 249 | WP_001349534.1 | osmoprotectant transport activator ProQ | - |
| DBR04_RS07515 () | 1145197..1145745 | - | 549 | WP_032153702.1 | hypothetical protein | - |
| DBR04_RS07525 () | 1146014..1146250 | - | 237 | WP_000958154.1 | AlpA family transcriptional regulator | - |
| DBR04_RS07530 () | 1146319..1146891 | - | 573 | WP_032153703.1 | hypothetical protein | - |
| DBR04_RS26830 () | 1146906..1147055 | + | 150 | WP_001421645.1 | hypothetical protein | - |
| DBR04_RS07535 () | 1147175..1147741 | - | 567 | WP_032153705.1 | inovirus-type Gp2 protein | - |
| DBR04_RS07540 () | 1149338..1150942 | - | 1605 | WP_001067608.1 | DUF3987 domain-containing protein | - |
| DBR04_RS07545 () | 1151376..1152033 | + | 658 | Protein_1083 | transposase | - |
| DBR04_RS07550 () | 1152127..1152858 | - | 732 | WP_032153707.1 | inovirus Gp2 family protein | - |
| DBR04_RS07565 () | 1154609..1155418 | + | 810 | WP_032153709.1 | hypothetical protein | - |
| DBR04_RS07570 () | 1155415..1156347 | - | 933 | WP_023155730.1 | hypothetical protein | - |
| DBR04_RS07575 () | 1156454..1157338 | + | 885 | WP_024166630.1 | 50S ribosome-binding GTPase | - |
| DBR04_RS07580 () | 1157457..1158134 | + | 678 | WP_023155728.1 | hypothetical protein | - |
| DBR04_RS07585 () | 1158164..1158373 | + | 210 | WP_023155727.1 | DUF905 family protein | - |
| DBR04_RS07590 () | 1158464..1159282 | + | 819 | WP_001234693.1 | DUF945 domain-containing protein | - |
| DBR04_RS07595 () | 1159374..1159859 | + | 486 | WP_032153711.1 | antirestriction protein | - |
| DBR04_RS07600 () | 1159875..1160351 | + | 477 | WP_001186715.1 | RadC family protein | - |
| DBR04_RS07605 () | 1160420..1160641 | + | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| DBR04_RS07610 () | 1160721..1161095 | + | 375 | WP_032153712.1 | type IV toxin-antitoxin system toxin CbtA | Antitoxin Detail |
| DBR04_RS07615 () | 1161142..1161519 | + | 378 | WP_000854735.1 | TA system toxin CbtA family protein | Toxin Detail |
| DBR04_RS07620 () | 1161516..1162007 | + | 492 | WP_023155722.1 | hypothetical protein | - |
| DBR04_RS07625 () | 1162019..1162216 | + | 198 | WP_000839265.1 | DUF957 domain-containing protein | - |
| DBR04_RS07630 () | 1162301..1163167 | + | 867 | WP_032153714.1 | DUF4942 domain-containing protein | - |
| DBR04_RS07635 () | 1163239..1163502 | + | 264 | WP_025492088.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| DBR04_RS07640 () | 1163499..1163825 | + | 327 | WP_000779483.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| DBR04_RS07645 () | 1164301..1164471 | + | 171 | Protein_1101 | IS110 family transposase | - |
| DBR04_RS07650 () | 1165282..1166265 | + | 984 | WP_024181915.1 | Arabinose 5-phosphate isomerase KpsF | VF |
| DBR04_RS07655 () | 1166337..1167485 | + | 1149 | WP_000905931.1 | hypothetical protein | VF |
| DBR04_RS07660 () | 1167509..1169185 | + | 1677 | WP_012767757.1 | Polysialic acid transport protein KpsD | VF |
| DBR04_RS07665 () | 1169195..1169935 | + | 741 | WP_000030740.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | VF |
| DBR04_RS07670 () | 1169932..1171959 | + | 2028 | WP_000579244.1 | hypothetical protein | VF |
| DBR04_RS07675 () | 1171994..1173226 | + | 1233 | WP_001153641.1 | hypothetical protein | VF |
| DBR04_RS07680 () | 1173480..1174439 | - | 960 | WP_000991482.1 | hypothetical protein | - |
| DBR04_RS07685 () | 1174474..1175613 | - | 1140 | WP_000069818.1 | hypothetical protein | VF |
| DBR04_RS07690 () | 1176188..1177561 | - | 1374 | WP_000789018.1 | Bifunctional ribulose 5-phosphate reductase/CDP-ribitol pyrophosphorylase Bcs1 | VF |
| DBR04_RS07695 () | 1177579..1178955 | - | 1377 | WP_012777785.1 | hypothetical protein | VF |
| DBR04_RS07700 () | 1179164..1179841 | - | 678 | WP_087503488.1 | Polysialic acid transport ATP-binding protein KpsT | VF |
| DBR04_RS07705 () | 1179838..1180614 | - | 777 | WP_000124290.1 | Polysialic acid transport protein KpsM | VF |
| DBR04_RS07710 () | 1181675..1182211 | - | 537 | WP_000942810.1 | Type II secretion system protein M | VF |
| DBR04_RS07715 () | 1182213..1183391 | - | 1179 | WP_000094981.1 | type II secretion system protein GspL | - |
| DBR04_RS07720 () | 1183388..1184365 | - | 978 | WP_000633200.1 | type II secretion system minor pseudopilin GspK | - |
| DBR04_RS07725 () | 1184362..1184967 | - | 606 | WP_023147221.1 | type II secretion system minor pseudopilin GspJ | - |
| DBR04_RS07730 () | 1184964..1185335 | - | 372 | WP_000820109.1 | type II secretion system minor pseudopilin GspI | - |
| DBR04_RS07735 () | 1185332..1185895 | - | 564 | WP_001115147.1 | type II secretion system minor pseudopilin GspH | - |
| DBR04_RS07740 () | 1185899..1186354 | - | 456 | WP_001087296.1 | type II secretion system major pseudopilin GspG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|