MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 109170 bp
Accession: NZ_CP022064 Location: 1..109170 Organism: Salmonella enterica subsp. enterica serovar Typhimurium var. 5- strain FDAARGOS_312 Replicon: plasmid unnamed4
Accession: NZ_CP022064 Location: 1..109170 Organism: Salmonella enterica subsp. enterica serovar Typhimurium var. 5- strain FDAARGOS_312 Replicon: plasmid unnamed4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CEP90_RS26370 () | 239..1332 | - | 1094 | Protein_0 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| CEP90_RS26375 () | 1332..1988 | - | 657 | WP_001193553.1 | prepilin peptidase | - |
| CEP90_RS26380 () | 1973..2533 | - | 561 | WP_000014116.1 | lytic transglycosylase domain-containing protein | - |
| CEP90_RS26385 () | 2543..3157 | - | 615 | WP_000959785.1 | pilus assembly protein PilX | - |
| CEP90_RS26390 () | 3175..4272 | - | 1098 | WP_001208805.1 | type II secretion system F family protein | - |
| CEP90_RS26395 () | 4285..5838 | - | 1554 | WP_000362202.1 | Flp pilus assembly complex ATPase component TadA | - |
| CEP90_RS26400 () | 5849..6301 | - | 453 | WP_001247336.1 | type IV pilus biogenesis protein PilP | - |
| CEP90_RS26405 () | 6288..7583 | - | 1296 | WP_000752774.1 | type 4b pilus protein PilO2 | - |
| CEP90_RS26410 () | 7576..9258 | - | 1683 | WP_000748143.1 | PilN family type IVB pilus formation outer membrane protein | - |
| CEP90_RS26415 () | 9272..9709 | - | 438 | WP_000539807.1 | type IV pilus biogenesis protein PilM | - |
| CEP90_RS26420 () | 9709..10776 | - | 1068 | WP_000742600.1 | type IV pilus biogenesis lipoprotein PilL | - |
| CEP90_RS26430 () | 11450..11902 | - | 453 | WP_000008892.1 | hypothetical protein | - |
| CEP90_RS26435 () | 11945..12199 | - | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
| CEP90_RS26440 () | 12467..13033 | - | 567 | WP_000776428.1 | hypothetical protein | - |
| CEP90_RS26445 () | 13047..13730 | - | 684 | WP_000213857.1 | conjugal transfer protein TraC | - |
| CEP90_RS26455 () | 13984..14517 | - | 534 | WP_001303319.1 | transcription termination factor NusG | - |
| CEP90_RS26465 () | 14959..15246 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| CEP90_RS26470 () | 15164..15427 | - | 264 | WP_001324596.1 | ash family protein | - |
| CEP90_RS26485 () | 16400..17431 | + | 1032 | WP_000907873.1 | replication initiation protein | - |
| CEP90_RS26500 () | 18340..18609 | + | 270 | WP_000079941.1 | hypothetical protein | Antitoxin Detail |
| CEP90_RS26505 () | 18606..18887 | + | 282 | WP_000970007.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CEP90_RS26510 () | 18927..19775 | + | 849 | WP_001057992.1 | 3'-5' exonuclease | - |
| CEP90_RS26515 () | 19892..20365 | + | 474 | WP_001334658.1 | hypothetical protein | - |
| CEP90_RS26525 () | 20842..21108 | - | 267 | WP_000955263.1 | hypothetical protein | - |
| CEP90_RS26530 () | 21108..21602 | - | 495 | WP_001459505.1 | hypothetical protein | - |
| CEP90_RS26535 () | 21658..22260 | - | 603 | WP_000517695.1 | hypothetical protein | - |
| CEP90_RS26545 () | 22614..23498 | + | 885 | Protein_26 | hypothetical protein | - |
| CEP90_RS26550 () | 23681..24943 | + | 1263 | WP_000608644.1 | IS1380-like element ISEc9 family transposase | - |
| CEP90_RS26555 () | 25293..26411 | + | 1119 | WP_064757259.1 | CMY-2 family class C beta-lactamase | - |
| CEP90_RS26560 () | 26505..27038 | + | 534 | WP_001221666.1 | lipocalin family protein | - |
| CEP90_RS26565 () | 27035..27352 | - | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| CEP90_RS26570 () | 27404..27874 | + | 471 | Protein_31 | hypothetical protein | - |
| CEP90_RS26575 () | 28153..30033 | + | 1881 | WP_001283341.1 | colicin 1B | - |
| CEP90_RS26580 () | 30051..30398 | - | 348 | WP_000762570.1 | colicin 1B immunity protein | - |
| CEP90_RS26585 () | 30517..30864 | + | 348 | WP_000142436.1 | hypothetical protein | - |
| CEP90_RS26590 () | 30882..31472 | - | 591 | WP_000194550.1 | hypothetical protein | - |
| CEP90_RS26595 () | 31472..31726 | - | 255 | WP_000343103.1 | hypothetical protein | - |
| CEP90_RS26600 () | 32078..33079 | + | 1002 | WP_000774875.1 | DUF4238 domain-containing protein | - |
| CEP90_RS26605 () | 33255..33599 | - | 345 | WP_000793307.1 | hypothetical protein | - |
| CEP90_RS26610 () | 34098..34352 | - | 255 | WP_000678527.1 | hypothetical protein | - |
| CEP90_RS26615 () | 34397..35323 | - | 927 | WP_001290416.1 | hypothetical protein | - |
| CEP90_RS26625 () | 35881..36099 | + | 219 | WP_000813630.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| CEP90_RS26630 () | 36101..36406 | + | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| CEP90_RS26635 () | 36407..37213 | + | 807 | WP_000016969.1 | site-specific integrase | - |
| CEP90_RS26640 () | 37393..38037 | + | 645 | WP_001144036.1 | ParA family protein | - |
| CEP90_RS26645 () | 38124..38432 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| CEP90_RS26650 () | 38846..39826 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| CEP90_RS26655 () | 39819..40235 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| CEP90_RS26660 () | 40237..41511 | - | 1275 | WP_058804897.1 | Y-family DNA polymerase | - |
| CEP90_RS26665 () | 41511..41948 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| CEP90_RS26670 () | 41945..42193 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| CEP90_RS26680 () | 42611..43513 | + | 903 | WP_000273918.1 | DUF1281 domain-containing protein | - |
| CEP90_RS26685 () | 43510..43821 | + | 312 | WP_010891263.1 | hypothetical protein | - |
| CEP90_RS26690 () | 43898..44581 | + | 684 | WP_000086178.1 | DNA methylase | - |
| CEP90_RS26695 () | 44582..44803 | + | 222 | WP_001104887.1 | hypothetical protein | - |
| CEP90_RS26700 () | 44815..45249 | + | 435 | WP_000274403.1 | DUF1380 family protein | - |
| CEP90_RS27315 () | 45300..46070 | + | 771 | WP_024133193.1 | hypothetical protein | - |
| CEP90_RS26715 () | 46488..46913 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| CEP90_RS26720 () | 46960..47382 | + | 423 | WP_000271725.1 | DUF1380 family protein | - |
| CEP90_RS26725 () | 47379..47570 | + | 192 | WP_001027500.1 | hypothetical protein | - |
| CEP90_RS27495 () | 47903..47971 | - | 69 | Protein_60 | pilus protein | - |
| CEP90_RS26735 () | 48340..48867 | + | 528 | WP_001276116.1 | single-stranded DNA-binding protein | - |
| CEP90_RS26740 () | 48925..49158 | + | 234 | WP_000006012.1 | DUF905 family protein | - |
| CEP90_RS26745 () | 49217..51175 | + | 1959 | WP_001145458.1 | ParB/RepB/Spo0J family partition protein | - |
| CEP90_RS26750 () | 51230..51664 | + | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| CEP90_RS26755 () | 51661..52380 | + | 720 | WP_001276260.1 | plasmid SOS inhibition protein A | - |
| CEP90_RS26760 () | 52510..53685 | + | 1176 | WP_000942657.1 | transposase | - |
| CEP90_RS27335 () | 54132..54632 | + | 501 | WP_000117611.1 | antirestriction protein ArdA | - |
| CEP90_RS26780 () | 55361..55795 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| CEP90_RS26785 () | 55889..56155 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| CEP90_RS26790 () | 56220..57122 | + | 903 | WP_000038404.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| CEP90_RS26795 () | 57122..57391 | + | 270 | WP_077778895.1 | hypothetical protein | - |
| CEP90_RS26800 () | 57422..57673 | - | 252 | WP_000148286.1 | helix-turn-helix domain-containing protein | - |
| CEP90_RS26810 () | 58254..59102 | + | 849 | WP_001077027.1 | DUF4942 domain-containing protein | - |
| CEP90_RS26815 () | 59188..59523 | - | 336 | WP_000157086.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| CEP90_RS26820 () | 59757..60089 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| CEP90_RS26825 () | 60100..62799 | + | 2700 | WP_001474686.1 | IncI1-type relaxase NikB | - |
| CEP90_RS26830 () | 62836..65127 | - | 2292 | WP_001289271.1 | hypothetical protein | - |
| CEP90_RS26835 () | 65120..66190 | - | 1071 | WP_058804896.1 | IncI1-type conjugal transfer protein TrbB | - |
| CEP90_RS26840 () | 66209..67417 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| CEP90_RS26845 () | 67709..67861 | + | 153 | WP_001303307.1 | Hok/Gef family protein | - |
| CEP90_RS26850 () | 67933..68184 | - | 252 | WP_001291965.1 | hypothetical protein | - |
| CEP90_RS26855 () | 68545..69324 | - | 780 | WP_001323403.1 | IS21-like element IS100kyp family helper ATPase IstB | - |
| CEP90_RS26860 () | 69324..70346 | - | 1023 | WP_000255944.1 | IS21-like element IS100 family transposase | - |
| CEP90_RS27500 () | 71067..71243 | - | 177 | WP_001054900.1 | hypothetical protein | - |
| CEP90_RS26875 () | 71635..71844 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| CEP90_RS26880 () | 71916..72578 | - | 663 | WP_000644794.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| CEP90_RS26885 () | 72649..74817 | - | 2169 | WP_000698368.1 | DotA/TraY family protein | - |
| CEP90_RS26890 () | 74914..75498 | - | 585 | WP_001037998.1 | conjugal transfer protein TraX | - |
| CEP90_RS26895 () | 75527..76729 | - | 1203 | WP_001189158.1 | IncI1-type conjugal transfer protein TraW | - |
| CEP90_RS26900 () | 76696..77310 | - | 615 | WP_000337394.1 | IncI1-type conjugal transfer protein TraV | - |
| CEP90_RS26905 () | 77310..80354 | - | 3045 | WP_001024751.1 | IncI1-type conjugal transfer protein TraU | - |
| CEP90_RS26910 () | 80444..81244 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| CEP90_RS26915 () | 81228..81416 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| CEP90_RS26920 () | 81480..81884 | - | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| CEP90_RS26925 () | 81935..82462 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| CEP90_RS26930 () | 82462..83166 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| CEP90_RS26935 () | 83166..84455 | - | 1290 | WP_001271997.1 | conjugal transfer protein TraO | - |
| CEP90_RS26940 () | 84458..85441 | - | 984 | WP_001191878.1 | IncI1-type conjugal transfer protein TraN | - |
| CEP90_RS26945 () | 85452..86144 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| CEP90_RS26950 () | 86141..86488 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| CEP90_RS26955 () | 86506..90273 | - | 3768 | WP_001141535.1 | hypothetical protein | - |
| CEP90_RS26960 () | 90363..90914 | - | 552 | WP_000014584.1 | phospholipase D family protein | - |
| CEP90_RS26965 () | 90929..91219 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| CEP90_RS26970 () | 91216..92364 | - | 1149 | WP_001024972.1 | plasmid transfer ATPase TraJ | - |
| CEP90_RS26975 () | 92361..93179 | - | 819 | WP_000646097.1 | IncI1-type conjugal transfer lipoprotein TraI | - |
| CEP90_RS26980 () | 93176..93634 | - | 459 | WP_001079808.1 | IncI1-type conjugal transfer lipoprotein TraH | - |
| CEP90_RS26985 () | 94029..94613 | - | 585 | WP_000977517.1 | histidine phosphatase family protein | - |
| CEP90_RS26990 () | 94673..95875 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| CEP90_RS26995 () | 95961..96785 | - | 825 | WP_001238927.1 | hypothetical protein | - |
| CEP90_RS27000 () | 96936..98090 | - | 1155 | WP_001139958.1 | integrase | - |
| CEP90_RS27020 () | 99001..100276 | - | 1276 | Protein_111 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| CEP90_RS27025 () | 100276..100932 | - | 657 | WP_001193553.1 | prepilin peptidase | - |
| CEP90_RS27030 () | 100917..101476 | - | 560 | Protein_113 | lytic transglycosylase domain-containing protein | - |
| CEP90_RS27035 () | 101486..102100 | - | 615 | WP_000959785.1 | pilus assembly protein PilX | - |
| CEP90_RS27040 () | 102118..103215 | - | 1098 | WP_001208805.1 | type II secretion system F family protein | - |
| CEP90_RS27045 () | 103228..104781 | - | 1554 | WP_000362202.1 | Flp pilus assembly complex ATPase component TadA | - |
| CEP90_RS27050 () | 104792..105244 | - | 453 | WP_001247336.1 | type IV pilus biogenesis protein PilP | - |
| CEP90_RS27055 () | 105231..106525 | - | 1295 | Protein_118 | type 4b pilus protein PilO2 | - |
| CEP90_RS27060 () | 106518..108200 | - | 1683 | WP_000748143.1 | PilN family type IVB pilus formation outer membrane protein | - |
| CEP90_RS27065 () | 108214..108651 | - | 438 | WP_000539807.1 | type IV pilus biogenesis protein PilM | - |
| CEP90_RS27070 () | 108651..109170 | - | 520 | Protein_121 | TcpQ domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|