MGE detailed information
MGE type: Genomic_island MGE length: 9836 bp
Accession: NZ_CP021726 Location: 3288684..3298519 Organism: Escherichia coli strain Combat11I9 Replicon: chromosome
Accession: NZ_CP021726 Location: 3288684..3298519 Organism: Escherichia coli strain Combat11I9 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CDC27_RS16720 () | 3284516..3285847 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| CDC27_RS16725 () | 3285869..3286858 | - | 990 | WP_000548345.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| CDC27_RS16735 () | 3286957..3287895 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| CDC27_RS29390 () | 3288210..3288428 | + | 219 | WP_000033206.1 | transcriptional activator TdcR | - |
| CDC27_RS16745 () | 3288684..3289223 | + | 540 | WP_000675739.1 | hypothetical protein | - |
| CDC27_RS16750 () | 3289245..3290432 | + | 1188 | WP_072685991.1 | YhaC family protein | - |
| CDC27_RS16760 () | 3291342..3292487 | - | 1146 | WP_001301934.1 | glycerate 2-kinase | - |
| CDC27_RS16765 () | 3292584..3293474 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| CDC27_RS16770 () | 3293504..3294274 | - | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| CDC27_RS16775 () | 3294290..3295624 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| CDC27_RS16780 () | 3295999..3297570 | + | 1572 | WP_072685993.1 | galactarate dehydratase | - |
| CDC27_RS16785 () | 3297720..3298055 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| CDC27_RS16790 () | 3298055..3298519 | + | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| CDC27_RS16795 () | 3298574..3299383 | - | 810 | WP_000072180.1 | aga operon transcriptional regulator AgaR | - |
| CDC27_RS16805 () | 3299632..3300912 | + | 1281 | WP_033814994.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| CDC27_RS16810 () | 3300935..3301408 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| CDC27_RS16815 () | 3301419..3302198 | + | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| CDC27_RS16820 () | 3302188..3303066 | + | 879 | WP_001295548.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| CDC27_RS16825 () | 3303084..3303518 | + | 435 | WP_033814993.1 | PTS sugar transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. Sakai | Genomic island | TA20368 | NC_002695 | 4007011..4017164 | 0.009 |