NZ_CP021431652..170927

MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 170276 bp
Accession: NZ_CP021431        Location: 652..170927         Organism: Yoonia vestfoldensis strain SMR4r       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
LOKVESSMR4R_RS00010 () 936..1340 + 405 WP_087205590.1 TrbC/VirB2 family protein -
LOKVESSMR4R_RS00015 () 1538..2455 + 918 WP_157898071.1 TrbG/VirB9 family P-type conjugative transfer protein -
LOKVESSMR4R_RS00020 () 2467..4866 + 2400 WP_087205593.1 hypothetical protein -
LOKVESSMR4R_RS20380 () 4853..5677 + 825 WP_162290716.1 hypothetical protein -
LOKVESSMR4R_RS00025 () 5674..6861 + 1188 WP_162290717.1 type IV secretion system protein -
LOKVESSMR4R_RS00030 () 6854..7519 + 666 WP_087205596.1 hypothetical protein -
LOKVESSMR4R_RS00035 () 7519..8217 + 699 WP_087205598.1 hypothetical protein -
LOKVESSMR4R_RS00040 () 8217..10001 + 1785 WP_087205600.1 DUF1524 domain-containing protein -
LOKVESSMR4R_RS00045 () 9989..11362 + 1374 WP_087205602.1 hypothetical protein -
LOKVESSMR4R_RS19960 () 11359..12048 + 690 WP_157898072.1 hypothetical protein -
LOKVESSMR4R_RS00055 () 12067..12285 + 219 WP_087205606.1 hypothetical protein -
LOKVESSMR4R_RS00060 () 12329..13495 + 1167 WP_087205607.1 hypothetical protein -
LOKVESSMR4R_RS00065 () 13492..13905 + 414 WP_157898073.1 hypothetical protein -
LOKVESSMR4R_RS00070 () 13898..15109 + 1212 WP_087205610.1 DUF1173 family protein -
LOKVESSMR4R_RS00075 () 15109..15531 + 423 WP_087205612.1 hypothetical protein -
LOKVESSMR4R_RS00080 () 15715..17538 + 1824 WP_157898074.1 type IV secretory system conjugative DNA transfer family protein -
LOKVESSMR4R_RS00085 () 17616..17897 + 282 WP_087205616.1 hypothetical protein -
LOKVESSMR4R_RS00090 () 17894..18253 + 360 WP_087205617.1 winged helix-turn-helix transcriptional regulator -
LOKVESSMR4R_RS00095 () 18285..27476 - 9192 WP_157898075.1 AAA family ATPase -
LOKVESSMR4R_RS00100 () 27487..28095 - 609 WP_087205621.1 MobA/MobL family protein -
LOKVESSMR4R_RS00105 () 29107..29793 + 687 WP_157898076.1 ParA family protein -
LOKVESSMR4R_RS00110 () 29813..30160 + 348 WP_087205625.1 hypothetical protein -
LOKVESSMR4R_RS00115 () 30153..31652 + 1500 WP_157898077.1 hypothetical protein -
LOKVESSMR4R_RS00120 () 31652..31855 + 204 WP_087205629.1 hypothetical protein -
LOKVESSMR4R_RS00125 () 31919..32404 - 486 WP_087205631.1 hypothetical protein -
LOKVESSMR4R_RS19965 () 32576..32746 - 171 WP_157898078.1 hypothetical protein -
LOKVESSMR4R_RS19970 () 33635..33838 - 204 WP_157898079.1 hypothetical protein -
LOKVESSMR4R_RS00135 () 34668..35621 - 954 WP_087205635.1 DUF2493 domain-containing protein -
LOKVESSMR4R_RS00140 () 36305..36484 - 180 WP_157898080.1 hypothetical protein -
LOKVESSMR4R_RS00145 () 36567..36962 - 396 WP_087205637.1 hypothetical protein -
LOKVESSMR4R_RS00150 () 37076..37390 - 315 WP_157898081.1 DUF736 family protein -
LOKVESSMR4R_RS00155 () 37561..38142 - 582 WP_157898082.1 hypothetical protein -
LOKVESSMR4R_RS00160 () 38132..38482 - 351 WP_087205643.1 DUF2958 domain-containing protein -
LOKVESSMR4R_RS00165 () 38598..39242 - 645 WP_087205644.1 antitoxin of toxin-antitoxin stability system -
LOKVESSMR4R_RS00170 () 39235..39654 - 420 WP_087205646.1 hypothetical protein -
LOKVESSMR4R_RS00175 () 39758..40060 - 303 WP_087205647.1 hypothetical protein -
LOKVESSMR4R_RS00180 () 40220..40588 + 369 WP_087212268.1 Flagellar secretion chaperone FliS VF
LOKVESSMR4R_RS00185 () 40715..41122 - 408 WP_087205648.1 hypothetical protein -
LOKVESSMR4R_RS00190 () 41122..41397 - 276 WP_157898083.1 hypothetical protein -
LOKVESSMR4R_RS00195 () 41498..42415 - 918 WP_087205651.1 DUF1738 domain-containing protein -
LOKVESSMR4R_RS00200 () 42532..42891 - 360 WP_087205654.1 hypothetical protein -
LOKVESSMR4R_RS19975 () 42888..43067 - 180 WP_157898084.1 hypothetical protein -
LOKVESSMR4R_RS00205 () 43064..43390 - 327 WP_157898085.1 hypothetical protein -
LOKVESSMR4R_RS00210 () 43520..47911 - 4392 WP_087205657.1 strawberry notch family protein -
LOKVESSMR4R_RS00215 () 48052..48339 + 288 WP_087205659.1 integration host factor subunit beta -
LOKVESSMR4R_RS00220 () 48399..49217 - 819 WP_087205661.1 hypothetical protein -
LOKVESSMR4R_RS00225 () 49442..50104 - 663 WP_087205663.1 hypothetical protein -
LOKVESSMR4R_RS00230 () 50360..50794 + 435 WP_087205664.1 peptidase S24 -
LOKVESSMR4R_RS00235 () 50791..52062 + 1272 WP_087205666.1 Y-family DNA polymerase -
LOKVESSMR4R_RS00240 () 52206..52904 - 699 WP_087205668.1 hypothetical protein -
LOKVESSMR4R_RS19980 () 52934..53173 - 240 WP_157898086.1 hypothetical protein -
LOKVESSMR4R_RS00245 () 53184..54359 - 1176 WP_087205670.1 IS5 family transposase ISPha2 Transposase
LOKVESSMR4R_RS00250 () 54808..56817 - 2010 WP_087205672.1 ParB/RepB/Spo0J family partition protein -
LOKVESSMR4R_RS00255 () 57011..57319 + 309 WP_087205673.1 hypothetical protein -
LOKVESSMR4R_RS00260 () 57625..58497 + 873 WP_012187142.1 Tyrosine recombinase XerD VF
LOKVESSMR4R_RS00265 () 58510..59712 + 1203 WP_012187141.1 IS91 family transposase ISMno24 Transposase
LOKVESSMR4R_RS00270 () 60411..61520 - 1110 WP_087212271.1 aminodeoxychorismate synthase component I -
LOKVESSMR4R_RS00275 () 61541..61834 - 294 WP_087212272.1 Dabb family protein -
LOKVESSMR4R_RS00280 () 62019..62978 - 960 WP_087205675.1 Biotin synthase VF
LOKVESSMR4R_RS00285 () 62983..63540 - 558 WP_087205676.1 biotin transporter BioY -
LOKVESSMR4R_RS00290 () 63629..64228 - 600 WP_087205678.1 GntR family transcriptional regulator -
LOKVESSMR4R_RS00295 () 64366..65223 - 858 WP_087205681.1 pantoate--beta-alanine ligase -
LOKVESSMR4R_RS00300 () 65220..66047 - 828 WP_087205683.1 3-methyl-2-oxobutanoate hydroxymethyltransferase -
LOKVESSMR4R_RS00305 () 66287..66916 - 630 Protein_64 hypothetical protein ; Integrase Integrase
LOKVESSMR4R_RS00310 () 67297..67587 + 291 WP_087205685.1 ATP-binding cassette domain-containing protein -
LOKVESSMR4R_RS00315 () 67829..69631 + 1803 WP_087205687.1 phosphomethylpyrimidine synthase ThiC -
LOKVESSMR4R_RS00320 () 69628..70596 + 969 WP_087205689.1 FAD-dependent oxidoreductase -
LOKVESSMR4R_RS00325 () 70565..70762 + 198 WP_087205692.1 sulfur carrier protein ThiS -
LOKVESSMR4R_RS00330 () 70764..71531 + 768 WP_087205694.1 thiazole synthase -
LOKVESSMR4R_RS00335 () 71531..72124 + 594 WP_087212275.1 thiamine phosphate synthase -
LOKVESSMR4R_RS00340 () 72121..73089 + 969 WP_087205696.1 ThiF family adenylyltransferase -
LOKVESSMR4R_RS00345 () 73086..73814 + 729 WP_087205698.1 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase -
LOKVESSMR4R_RS00350 () 74116..74796 + 681 WP_087205701.1 5,6-dimethylbenzimidazole synthase -
LOKVESSMR4R_RS00355 () 74804..75271 - 468 WP_087205703.1 preQ(1) synthase -
LOKVESSMR4R_RS00360 () 75287..76006 - 720 WP_087205705.1 7-carboxy-7-deazaguanine synthase QueE -
LOKVESSMR4R_RS00365 () 76003..76359 - 357 WP_087205707.1 6-carboxytetrahydropterin synthase QueD -
LOKVESSMR4R_RS00370 () 76359..77057 - 699 WP_087205709.1 7-cyano-7-deazaguanine synthase QueC -
LOKVESSMR4R_RS00375 () 77346..77978 - 633 WP_087212278.1 Tyrosine recombinase XerC ; Integrase Integrase
LOKVESSMR4R_RS00380 () 78289..79053 + 765 WP_087205710.1 Putative ketoacyl reductase VF
LOKVESSMR4R_RS00385 () 79025..81826 - 2802 WP_087205713.1 AMP-binding protein -
LOKVESSMR4R_RS00390 () 82208..83056 - 849 WP_087205715.1 carboxylating nicotinate-nucleotide diphosphorylase -
LOKVESSMR4R_RS00395 () 83053..84618 - 1566 WP_087205717.1 L-aspartate oxidase -
LOKVESSMR4R_RS00400 () 84624..85673 - 1050 WP_087205719.1 quinolinate synthase NadA -
LOKVESSMR4R_RS00405 () 85869..86099 - 231 WP_087205721.1 hypothetical protein -
LOKVESSMR4R_RS00410 () 86098..86985 + 888 WP_087205722.1 Tyrosine recombinase XerC VF
LOKVESSMR4R_RS00415 () 86996..87313 + 318 Protein_86 transposase zinc-binding domain-containing protein -
LOKVESSMR4R_RS00420 () 87638..88087 - 450 WP_087205724.1 DUF411 domain-containing protein -
LOKVESSMR4R_RS00425 () 88128..89519 - 1392 WP_087205726.1 multicopper oxidase family protein -
LOKVESSMR4R_RS00430 () 89516..90466 - 951 WP_087205728.1 CopD family protein -
LOKVESSMR4R_RS00435 () 90473..90832 - 360 WP_087205730.1 copper resistance protein CopC -
LOKVESSMR4R_RS00440 () 90902..91246 - 345 WP_087205731.1 copper-binding protein -
LOKVESSMR4R_RS00445 () 91284..94463 - 3180 WP_087205733.1 efflux RND transporter permease subunit -
LOKVESSMR4R_RS00450 () 94460..96670 - 2211 WP_087205735.1 efflux RND transporter periplasmic adaptor subunit -
LOKVESSMR4R_RS00460 () 97403..97879 + 477 WP_087205740.1 DUF305 domain-containing protein -
LOKVESSMR4R_RS00465 () 97939..100386 + 2448 WP_087212281.1 heavy metal translocating P-type ATPase -
LOKVESSMR4R_RS00470 () 100428..100847 + 420 WP_087205742.1 cytochrome c -
LOKVESSMR4R_RS00475 () 100888..101493 - 606 WP_157898087.1 Crp/Fnr family transcriptional regulator -
LOKVESSMR4R_RS00480 () 101561..102121 + 561 WP_157898088.1 hypothetical protein -
LOKVESSMR4R_RS00490 () 103545..104819 - 1275 WP_087205750.1 MFS transporter -
LOKVESSMR4R_RS00495 () 104829..105107 - 279 WP_087205752.1 metal-sensing transcriptional repressor -
LOKVESSMR4R_RS00500 () 105171..105530 + 360 WP_157898089.1 hypothetical protein -
LOKVESSMR4R_RS00505 () 105585..106322 + 738 WP_087205756.1 HupE/UreJ family protein -
LOKVESSMR4R_RS00510 () 106338..106952 + 615 WP_087205757.1 transmembrane anchor protein -
LOKVESSMR4R_RS00515 () 107372..108403 + 1032 WP_087205760.1 IS110 family transposase ISRhru3 Transposase
LOKVESSMR4R_RS00520 () 108829..111123 + 2295 Protein_106 strawberry notch family protein -
LOKVESSMR4R_RS00525 () 111173..112407 + 1235 WP_087205762.1 IS3 family transposase ISMex33 Transposase
LOKVESSMR4R_RS00530 () 112411..112668 + 258 WP_157898090.1 hypothetical protein -
LOKVESSMR4R_RS00535 () 112791..114317 + 1527 WP_087205766.1 Tyrosine recombinase XerD ; Integrase Integrase
LOKVESSMR4R_RS00540 () 114314..115225 + 912 WP_087205768.1 Tn3 family transposase TnBth2 Transposase
LOKVESSMR4R_RS00545 () 115222..116226 + 1005 WP_087205770.1 Tyrosine recombinase XerD VF
LOKVESSMR4R_RS00550 () 116267..118708 - 2442 WP_087212283.1 DEAD/DEAH box helicase -
LOKVESSMR4R_RS00555 () 118952..120736 + 1785 Protein_113 strawberry notch C-terminal domain-containing protein -
LOKVESSMR4R_RS00560 () 120863..121249 + 387 WP_087212286.1 hypothetical protein -
LOKVESSMR4R_RS00565 () 121251..121708 + 458 Protein_115 hypothetical protein -
LOKVESSMR4R_RS00570 () 121809..122111 + 303 WP_087205774.1 hypothetical protein -
LOKVESSMR4R_RS00575 () 122236..122964 + 729 WP_087205775.1 DUF736 family protein -
LOKVESSMR4R_RS00580 () 123480..124649 + 1170 WP_087212290.1 MerR family transcriptional regulator -
LOKVESSMR4R_RS00585 () 124717..125166 + 450 WP_087212295.1 GNAT family N-acetyltransferase -
LOKVESSMR4R_RS00595 () 126590..127666 + 1077 WP_087205777.1 ribosome small subunit-dependent GTPase A -
LOKVESSMR4R_RS00600 () 128107..128562 - 456 WP_087212298.1 hypothetical protein -
LOKVESSMR4R_RS00605 () 128565..128984 - 420 WP_087205779.1 hypothetical protein -
LOKVESSMR4R_RS00610 () 129161..129661 + 501 WP_157898091.1 hypothetical protein -
LOKVESSMR4R_RS00615 () 129823..130086 + 264 WP_087205783.1 BrnT family toxin Toxin Detail
LOKVESSMR4R_RS00620 () 130073..130288 + 216 WP_066009074.1 CopG family transcriptional regulator Antitoxin Detail
LOKVESSMR4R_RS00625 () 130388..132028 + 1641 WP_087205784.1 hypothetical protein -
LOKVESSMR4R_RS00630 () 131983..133584 + 1602 WP_157898092.1 Eco57I restriction-modification methylase domain-containing protein -
LOKVESSMR4R_RS00635 () 133697..134446 + 750 WP_157898093.1 hypothetical protein -
LOKVESSMR4R_RS00640 () 134751..135005 + 255 WP_087205790.1 type II toxin-antitoxin system HicA family toxin -
LOKVESSMR4R_RS00645 () 135002..135346 + 345 WP_087205792.1 type II toxin-antitoxin system HicB family antitoxin -
LOKVESSMR4R_RS19985 () 135393..135734 - 342 WP_157898094.1 hypothetical protein -
LOKVESSMR4R_RS00650 () 135727..136404 - 678 WP_087205794.1 Protein virC1 VF
LOKVESSMR4R_RS00655 () 136891..137601 + 711 WP_087212131.1 GDP-L-fucose synthase VF
LOKVESSMR4R_RS00660 () 137623..138537 - 915 Protein_135 GDP-L-fucose synthase VF
LOKVESSMR4R_RS00665 () 138542..139663 - 1122 WP_087205796.1 GDP-mannose 4,6-dehydratase VF
LOKVESSMR4R_RS00670 () 139806..140561 + 756 WP_087205798.1 DUF2793 domain-containing protein -
LOKVESSMR4R_RS00675 () 140866..141426 + 561 WP_204248702.1 F0F1 ATP synthase subunit delta -
LOKVESSMR4R_RS00680 () 141426..142961 + 1536 WP_087205800.1 ATP synthase subunit alpha VF
LOKVESSMR4R_RS00685 () 142985..143857 + 873 WP_087205802.1 F0F1 ATP synthase subunit gamma -
LOKVESSMR4R_RS00690 () 143876..145300 + 1425 WP_087205804.1 ATP synthase subunit beta VF
LOKVESSMR4R_RS00695 () 145313..145750 + 438 WP_087205806.1 F0F1 ATP synthase subunit epsilon -
LOKVESSMR4R_RS00700 () 145811..146821 - 1011 WP_204248750.1 ribose-phosphate diphosphokinase -
LOKVESSMR4R_RS00705 () 146946..147542 + 597 WP_087205810.1 2-hydroxychromene-2-carboxylate isomerase -
LOKVESSMR4R_RS00710 () 147542..148303 + 762 WP_087205811.1 alpha/beta hydrolase -
LOKVESSMR4R_RS00715 () 148272..149318 - 1047 WP_087205813.1 aminotransferase class V-fold PLP-dependent enzyme -
LOKVESSMR4R_RS00720 () 149319..149789 - 471 WP_087205815.1 YcgN family cysteine cluster protein -
LOKVESSMR4R_RS00725 () 149779..150720 - 942 WP_087205817.1 bifunctional riboflavin kinase/FAD synthetase -
LOKVESSMR4R_RS00730 () 150757..151200 - 444 WP_087205820.1 MaoC family dehydratase -
LOKVESSMR4R_RS00735 () 151286..152161 - 876 WP_087205823.1 TIGR01459 family HAD-type hydrolase -
LOKVESSMR4R_RS00740 () 152171..153088 - 918 WP_162290718.1 manganese-dependent inorganic pyrophosphatase -
LOKVESSMR4R_RS00745 () 153182..153886 + 705 WP_087205826.1 hypothetical protein -
LOKVESSMR4R_RS00750 () 153892..154881 - 990 WP_087205828.1 TraB/GumN family protein -
LOKVESSMR4R_RS00755 () 154962..155942 - 981 WP_087205829.1 hypothetical protein -
LOKVESSMR4R_RS00765 () 156290..156952 + 663 WP_087205833.1 Transcriptional regulatory protein QseB VF
LOKVESSMR4R_RS00770 () 156949..158292 + 1344 WP_087205835.1 sensor histidine kinase -
LOKVESSMR4R_RS00775 () 158355..159332 + 978 WP_087205837.1 DUF2125 domain-containing protein -
LOKVESSMR4R_RS00780 () 159329..160309 - 981 WP_087205840.1 YcjF family protein -
LOKVESSMR4R_RS00785 () 160306..161718 - 1413 WP_087205842.1 YcjX family protein -
LOKVESSMR4R_RS00790 () 161813..162586 + 774 WP_087205844.1 tRNA pseudouridine(38-40) synthase TruA -
LOKVESSMR4R_RS00795 () 162754..164475 + 1722 WP_087212304.1 BamA/TamA family outer membrane protein -
LOKVESSMR4R_RS00800 () 164472..168734 + 4263 WP_087205846.1 translocation/assembly module TamB domain-containing protein -
LOKVESSMR4R_RS00805 () 168841..169413 + 573 WP_087205848.1 hemerythrin domain-containing protein -
LOKVESSMR4R_RS00810 () 169414..169770 - 357 WP_087205850.1 dihydrodipicolinate reductase -
LOKVESSMR4R_RS00815 () 169867..170676 - 810 WP_087205852.1 4-hydroxy-tetrahydrodipicolinate reductase -
LOKVESSMR4R_RS00820 () 170773..171168 + 396 WP_087205854.1 30S ribosome-binding factor RbfA -
LOKVESSMR4R_RS00825 () 171165..171881 + 717 WP_087205858.1 phosphodiester glycosidase family protein -
LOKVESSMR4R_RS00830 () 171848..172285 - 438 WP_087205860.1 NUDIX hydrolase -
LOKVESSMR4R_RS00835 () 172391..173299 + 909 WP_087212307.1 co-chaperone YbbN -
LOKVESSMR4R_RS00840 () 173326..173967 + 642 WP_087205862.1 LON peptidase substrate-binding domain-containing protein -
LOKVESSMR4R_RS00845 () 173964..174143 + 180 WP_087205864.1 Trm112 family protein -
LOKVESSMR4R_RS00850 () 174245..175045 + 801 WP_157898095.1 hypothetical protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance