MGE detailed information
MGE type: Genomic_island MGE length: 32666 bp
Accession: NZ_CP021393 Location: 1290725..1323390 Organism: Bifidobacterium breve strain NRBB52 Replicon: chromosome
Accession: NZ_CP021393 Location: 1290725..1323390 Organism: Bifidobacterium breve strain NRBB52 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NRBB52_RS05875 () | 1285983..1286807 | + | 825 | WP_106641206.1 | aminotransferase class V-fold PLP-dependent enzyme | - |
| NRBB52_RS05880 () | 1286876..1287175 | + | 300 | WP_106641075.1 | DUF2316 family protein | - |
| NRBB52_RS05885 () | 1287216..1287749 | - | 534 | WP_106641076.1 | GNAT family N-acetyltransferase | - |
| NRBB52_RS05890 () | 1287885..1288214 | - | 330 | WP_106641077.1 | hypothetical protein | - |
| NRBB52_RS05905 () | 1288624..1289430 | - | 807 | WP_011068121.1 | Abi family protein | - |
| NRBB52_RS10915 () | 1289593..1289847 | - | 255 | WP_003829406.1 | hypothetical protein | - |
| NRBB52_RS05935 () | 1291356..1292429 | - | 1074 | WP_007056270.1 | histidine kinase | - |
| NRBB52_RS05940 () | 1292495..1293190 | - | 696 | WP_050824880.1 | response regulator transcription factor | - |
| NRBB52_RS05945 () | 1293316..1293831 | + | 516 | WP_050824879.1 | hypothetical protein | - |
| NRBB52_RS05950 () | 1293828..1294718 | + | 891 | WP_007056280.1 | hypothetical protein | - |
| NRBB52_RS05955 () | 1294715..1295395 | + | 681 | WP_003829413.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| NRBB52_RS05960 () | 1295392..1296561 | + | 1170 | WP_050824877.1 | ABC transporter permease | - |
| NRBB52_RS05965 () | 1296746..1297015 | + | 270 | WP_014483711.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| NRBB52_RS05970 () | 1297019..1297312 | + | 294 | WP_050824876.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| NRBB52_RS10795 () | 1297318..1297590 | - | 273 | WP_157825602.1 | hypothetical protein | - |
| NRBB52_RS05980 () | 1297980..1298558 | + | 579 | WP_032743531.1 | hypothetical protein | VF |
| NRBB52_RS05985 () | 1298565..1299392 | + | 828 | WP_106641078.1 | hypothetical protein | - |
| NRBB52_RS05990 () | 1299524..1300150 | + | 627 | WP_012577737.1 | hypothetical protein | - |
| NRBB52_RS05995 () | 1300147..1300929 | + | 783 | WP_106641079.1 | murein hydrolase transporter LrgB | - |
| NRBB52_RS06000 () | 1300982..1301857 | + | 876 | WP_003829425.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| NRBB52_RS10920 () | 1301956..1302021 | + | 66 | Protein_1125 | superoxide dismutase | - |
| NRBB52_RS06005 () | 1302116..1302478 | - | 363 | WP_003829427.1 | hypothetical protein | - |
| NRBB52_RS06010 () | 1302602..1303477 | - | 876 | WP_106641080.1 | EamA family transporter | - |
| NRBB52_RS06015 () | 1303681..1304304 | - | 624 | WP_106641081.1 | cytochrome C oxidase subunit IV | - |
| NRBB52_RS06020 () | 1304301..1305029 | - | 729 | WP_012577741.1 | hypothetical protein | - |
| NRBB52_RS06025 () | 1305034..1305690 | - | 657 | WP_003829431.1 | ATP-binding cassette domain-containing protein | - |
| NRBB52_RS10925 () | 1305623..1305820 | - | 198 | WP_162531455.1 | hypothetical protein | - |
| NRBB52_RS06030 () | 1306023..1307257 | + | 1235 | Protein_1132 | IS30 family transposase ISBlo4 | Transposase |
| NRBB52_RS06035 () | 1307449..1308117 | - | 669 | WP_012577742.1 | response regulator transcription factor | - |
| NRBB52_RS06040 () | 1308114..1309343 | - | 1230 | WP_003829436.1 | two-component sensor histidine kinase | - |
| NRBB52_RS06045 () | 1309376..1310800 | - | 1425 | WP_003829437.1 | FtsX-like permease family protein | - |
| NRBB52_RS06050 () | 1310793..1311695 | - | 903 | WP_012577745.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| NRBB52_RS06055 () | 1311890..1312423 | - | 534 | WP_012577746.1 | hypothetical protein | - |
| NRBB52_RS06060 () | 1312755..1313057 | + | 303 | WP_003829440.1 | DUF2089 family protein | - |
| NRBB52_RS06065 () | 1313060..1313404 | + | 345 | WP_007052254.1 | hypothetical protein | - |
| NRBB52_RS06070 () | 1313545..1313958 | - | 414 | WP_106641082.1 | MerR family transcriptional regulator | - |
| NRBB52_RS06075 () | 1314380..1315021 | + | 642 | WP_012577747.1 | hypothetical protein | - |
| NRBB52_RS06085 () | 1315256..1316449 | - | 1194 | WP_009243571.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| NRBB52_RS06090 () | 1316528..1316731 | - | 204 | WP_002610247.1 | excisionase | - |
| NRBB52_RS06095 () | 1316731..1317893 | - | 1163 | Protein_1144 | replication initiation factor domain-containing protein | - |
| NRBB52_RS06100 () | 1318278..1318913 | + | 636 | WP_008819043.1 | helix-turn-helix domain-containing protein | - |
| NRBB52_RS06105 () | 1319096..1320031 | + | 936 | WP_162607595.1 | alpha/beta hydrolase | - |
| NRBB52_RS10930 () | 1320481..1320774 | + | 294 | WP_012471870.1 | hypothetical protein | - |
| NRBB52_RS10935 () | 1321112..1321258 | + | 147 | WP_007056267.1 | hypothetical protein | - |
| NRBB52_RS06115 () | 1321422..1321745 | - | 324 | WP_106641083.1 | amidohydrolase | - |
| NRBB52_RS06120 () | 1321774..1322394 | - | 621 | WP_007054239.1 | NUDIX hydrolase | - |
| NRBB52_RS06125 () | 1322496..1323173 | - | 678 | WP_106641084.1 | YidC/Oxa1 family membrane protein insertase | - |
| NRBB52_RS06130 () | 1323173..1323390 | - | 218 | Protein_1152 | YidC/Oxa1 family membrane protein insertase | - |
| NRBB52_RS06135 () | 1323398..1323552 | + | 155 | Protein_1153 | permease | - |
| NRBB52_RS06140 () | 1323587..1324218 | + | 632 | Protein_1154 | MFS transporter | - |
| NRBB52_RS06145 () | 1324542..1326122 | + | 1581 | WP_077149504.1 | amino acid permease | - |
| NRBB52_RS06150 () | 1326364..1326603 | - | 240 | WP_014483708.1 | hypothetical protein | - |
| NRBB52_RS06155 () | 1326900..1327253 | + | 354 | WP_014483707.1 | DUF488 domain-containing protein | - |
| NRBB52_RS10940 () | 1327319..1327747 | - | 429 | WP_032743755.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|