MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 77006 bp
Accession: NZ_CP020980 Location: 1..77006 Organism: Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6988R Replicon: plasmid pA
Accession: NZ_CP020980 Location: 1..77006 Organism: Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6988R Replicon: plasmid pA
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| XcfCFBP6988P_RS23075 () | 1..2698 | - | 2698 | Protein_0 | Tn3 family transposase | - |
| XcfCFBP6988P_RS23080 () | 2695..3287 | - | 593 | Protein_1 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| XcfCFBP6988P_RS23085 () | 3499..3753 | + | 255 | WP_022557731.1 | plasmid stability protein | Antitoxin Detail |
| XcfCFBP6988P_RS23090 () | 3750..4166 | + | 417 | WP_022557732.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| XcfCFBP6988P_RS23095 () | 4180..4734 | + | 555 | WP_033482006.1 | plasmid pRiA4b ORF-3 family protein | - |
| XcfCFBP6988P_RS23100 () | 4809..4946 | - | 138 | Protein_5 | IS3 family transposase ISXcd1 | Transposase |
| XcfCFBP6988P_RS23105 () | 5016..5546 | - | 531 | Protein_6 | DNA topoisomerase III | - |
| XcfCFBP6988P_RS23110 () | 5698..6990 | - | 1293 | WP_033481893.1 | hypothetical protein | - |
| XcfCFBP6988P_RS23115 () | 7117..8436 | - | 1320 | WP_022557736.1 | DUF4990 domain-containing protein | - |
| XcfCFBP6988P_RS23125 () | 8835..9665 | - | 831 | Protein_9 | DNA topoisomerase III | - |
| XcfCFBP6988P_RS23130 () | 9667..9915 | - | 249 | WP_033481882.1 | hypothetical protein | - |
| XcfCFBP6988P_RS23135 () | 9988..10227 | - | 240 | WP_005997461.1 | hypothetical protein | - |
| XcfCFBP6988P_RS23140 () | 10238..10444 | - | 207 | WP_017164026.1 | hypothetical protein | - |
| XcfCFBP6988P_RS23145 () | 10617..11969 | - | 1353 | WP_046735872.1 | TrbI/VirB10 family protein | - |
| XcfCFBP6988P_RS23150 () | 11985..12977 | - | 993 | WP_017164024.1 | P-type conjugative transfer protein TrbG | - |
| XcfCFBP6988P_RS23155 () | 13004..13714 | - | 711 | WP_039574290.1 | type IV secretory pathway, TrbF protein | - |
| XcfCFBP6988P_RS23160 () | 13721..15199 | - | 1479 | WP_046735871.1 | P-type conjugative transfer protein TrbL | - |
| XcfCFBP6988P_RS23770 () | 15417..15770 | - | 354 | WP_127446653.1 | hypothetical protein | - |
| XcfCFBP6988P_RS23165 () | 15767..16540 | - | 774 | WP_039570072.1 | conjugal transfer protein | - |
| XcfCFBP6988P_RS23170 () | 16559..19129 | - | 2571 | WP_039570074.1 | DUF853 family protein | - |
| XcfCFBP6988P_RS23175 () | 19196..19429 | - | 234 | WP_074052351.1 | VirB3 family type IV secretion system protein | - |
| XcfCFBP6988P_RS23180 () | 19465..19785 | - | 321 | WP_017162817.1 | TrbC/VirB2 family protein | - |
| XcfCFBP6988P_RS23185 () | 19859..20863 | - | 1005 | WP_017164019.1 | Putative conjugal transfer protein | VF |
| XcfCFBP6988P_RS23190 () | 20948..21157 | - | 210 | WP_017164018.1 | helix-turn-helix domain-containing protein | - |
| XcfCFBP6988P_RS23195 () | 21860..22678 | - | 819 | WP_039587854.1 | hypothetical protein | - |
| XcfCFBP6988P_RS23200 () | 23254..23643 | - | 390 | WP_039587855.1 | hypothetical protein | - |
| XcfCFBP6988P_RS23205 () | 23786..24232 | - | 447 | WP_039572194.1 | avidin/streptavidin family protein | - |
| XcfCFBP6988P_RS23210 () | 24614..25840 | - | 1227 | WP_011345585.1 | IS256 family transposase ISXax1 | Transposase |
| XcfCFBP6988P_RS23215 () | 25872..26183 | + | 312 | WP_099802907.1 | hypothetical protein | - |
| XcfCFBP6988P_RS23220 () | 26349..26888 | - | 540 | WP_022557742.1 | plasmid pRiA4b ORF-3 family protein | - |
| XcfCFBP6988P_RS23225 () | 26921..27412 | - | 492 | WP_017171863.1 | hypothetical protein | - |
| XcfCFBP6988P_RS24050 () | 27409..28681 | - | 1273 | Protein_31 | Conjugal transfer protein TraG | VF |
| XcfCFBP6988P_RS23235 () | 29465..32095 | - | 2631 | WP_039572187.1 | hypothetical protein | Relaxase |
| XcfCFBP6988P_RS23240 () | 32706..33296 | - | 591 | WP_052756669.1 | Type IV secretion system protein virB1 | VF |
| XcfCFBP6988P_RS23245 () | 33289..33885 | - | 597 | WP_080948837.1 | S26 family signal peptidase | - |
| XcfCFBP6988P_RS23250 () | 33890..34354 | - | 465 | WP_022557748.1 | DUF2840 domain-containing protein | - |
| XcfCFBP6988P_RS23255 () | 34598..34933 | - | 336 | WP_039572180.1 | hypothetical protein | - |
| XcfCFBP6988P_RS23260 () | 34930..35565 | - | 636 | WP_039572177.1 | AAA family ATPase | - |
| XcfCFBP6988P_RS23775 () | 35637..35975 | + | 339 | WP_099859120.1 | hypothetical protein | - |
| XcfCFBP6988P_RS23265 () | 36583..37404 | - | 822 | WP_099802905.1 | hypothetical protein | - |
| XcfCFBP6988P_RS23270 () | 37758..38342 | - | 585 | WP_022557751.1 | hypothetical protein | - |
| XcfCFBP6988P_RS23275 () | 38454..38798 | - | 345 | WP_022557752.1 | hypothetical protein | - |
| XcfCFBP6988P_RS23280 () | 39026..39253 | - | 228 | WP_022557753.1 | hypothetical protein | - |
| XcfCFBP6988P_RS23285 () | 39305..39577 | - | 273 | Protein_43 | hypothetical protein | - |
| XcfCFBP6988P_RS23295 () | 39834..43850 | + | 4017 | WP_099802904.1 | TAL effector repeat-containing protein | - |
| XcfCFBP6988P_RS23300 () | 43962..44288 | - | 327 | Protein_45 | hypothetical protein | - |
| XcfCFBP6988P_RS23305 () | 44415..44813 | - | 399 | WP_039731964.1 | hypothetical protein | - |
| XcfCFBP6988P_RS23310 () | 45392..45667 | - | 276 | WP_022557719.1 | hypothetical protein | - |
| XcfCFBP6988P_RS23315 () | 46227..46550 | - | 324 | WP_022557721.1 | hypothetical protein | - |
| XcfCFBP6988P_RS23330 () | 47872..48480 | + | 609 | WP_040965625.1 | hypothetical protein | - |
| XcfCFBP6988P_RS23335 () | 48517..49116 | - | 600 | WP_022557725.1 | hypothetical protein | - |
| XcfCFBP6988P_RS23340 () | 49139..49465 | - | 327 | WP_033481858.1 | hypothetical protein | - |
| XcfCFBP6988P_RS23345 () | 49469..49705 | - | 237 | Protein_52 | hypothetical protein | - |
| XcfCFBP6988P_RS23350 () | 49746..50207 | - | 462 | WP_039731445.1 | hypothetical protein | - |
| XcfCFBP6988P_RS23355 () | 50386..51243 | - | 858 | WP_033481873.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| XcfCFBP6988P_RS23360 () | 51236..52150 | - | 915 | WP_022557729.1 | hypothetical protein | - |
| XcfCFBP6988P_RS24055 () | 52833..52937 | + | 105 | Protein_56 | type III secretion system effector protein | - |
| XcfCFBP6988P_RS23370 () | 53072..54124 | + | 1053 | WP_022557730.1 | type III secretion system YopJ family effector AvrBsT | - |
| XcfCFBP6988P_RS23385 () | 55408..55656 | - | 249 | WP_042826723.1 | hypothetical protein | - |
| XcfCFBP6988P_RS23390 () | 55746..56704 | - | 959 | Protein_59 | IS3 family transposase ISXcd1 | Transposase |
| XcfCFBP6988P_RS23395 () | 56737..59766 | - | 3030 | WP_022560486.1 | Tn3 family transposase ISPsy42 | Transposase |
| XcfCFBP6988P_RS23400 () | 59763..60356 | - | 594 | WP_022560487.1 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| XcfCFBP6988P_RS23405 () | 60568..60822 | + | 255 | WP_022557731.1 | plasmid stability protein | Antitoxin Detail |
| XcfCFBP6988P_RS23410 () | 60819..61235 | + | 417 | WP_022557732.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| XcfCFBP6988P_RS23415 () | 61249..61803 | + | 555 | WP_033482006.1 | plasmid pRiA4b ORF-3 family protein | - |
| XcfCFBP6988P_RS23420 () | 61878..62015 | - | 138 | Protein_65 | IS3 family transposase ISXcd1 | Transposase |
| XcfCFBP6988P_RS23425 () | 62085..62615 | - | 531 | Protein_66 | DNA topoisomerase III | - |
| XcfCFBP6988P_RS23430 () | 62767..64059 | - | 1293 | WP_033481893.1 | hypothetical protein | - |
| XcfCFBP6988P_RS23435 () | 64186..65505 | - | 1320 | WP_022557736.1 | DUF4990 domain-containing protein | - |
| XcfCFBP6988P_RS23445 () | 65904..66734 | - | 831 | Protein_69 | DNA topoisomerase III | - |
| XcfCFBP6988P_RS23450 () | 66736..66984 | - | 249 | WP_033481882.1 | hypothetical protein | - |
| XcfCFBP6988P_RS23455 () | 67057..67296 | - | 240 | WP_005997461.1 | hypothetical protein | - |
| XcfCFBP6988P_RS23460 () | 67307..67513 | - | 207 | WP_017164026.1 | hypothetical protein | - |
| XcfCFBP6988P_RS23465 () | 67686..69038 | - | 1353 | WP_046735872.1 | TrbI/VirB10 family protein | - |
| XcfCFBP6988P_RS23470 () | 69054..70046 | - | 993 | WP_017164024.1 | P-type conjugative transfer protein TrbG | - |
| XcfCFBP6988P_RS23475 () | 70073..70783 | - | 711 | WP_039574290.1 | type IV secretory pathway, TrbF protein | - |
| XcfCFBP6988P_RS23480 () | 70790..72268 | - | 1479 | WP_046735871.1 | P-type conjugative transfer protein TrbL | - |
| XcfCFBP6988P_RS23780 () | 72500..72838 | - | 339 | WP_145958303.1 | hypothetical protein | - |
| XcfCFBP6988P_RS23485 () | 72835..73606 | - | 772 | Protein_78 | conjugal transfer protein | - |
| XcfCFBP6988P_RS23490 () | 73625..76182 | - | 2558 | Protein_79 | DUF853 family protein | - |
| XcfCFBP6988P_RS23495 () | 76249..76482 | - | 234 | WP_074052351.1 | VirB3 family type IV secretion system protein | - |
| XcfCFBP6988P_RS23500 () | 76484..76836 | - | 353 | Protein_81 | TrbC/VirB2 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|