MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 60283 bp
Accession: NZ_CP020972 Location: 1..60283 Organism: Xanthomonas phaseoli pv. phaseoli strain CFBP6546R Replicon: plasmid pA
Accession: NZ_CP020972 Location: 1..60283 Organism: Xanthomonas phaseoli pv. phaseoli strain CFBP6546R Replicon: plasmid pA
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| XppCFBP6546P_RS21815 (XppCFBP6546P_23020) | 1..324 | + | 324 | WP_039572152.1 | hypothetical protein | - |
| XppCFBP6546P_RS21820 (XppCFBP6546P_23030) | 728..1003 | + | 276 | WP_039572155.1 | hypothetical protein | - |
| XppCFBP6546P_RS21825 (XppCFBP6546P_24140) | 1024..1314 | + | 291 | WP_127446651.1 | hypothetical protein | - |
| XppCFBP6546P_RS21830 (XppCFBP6546P_23035) | 1669..2067 | + | 399 | WP_039572158.1 | hypothetical protein | - |
| XppCFBP6546P_RS21835 (XppCFBP6546P_24145) | 2140..2301 | + | 162 | WP_157926053.1 | hypothetical protein | - |
| XppCFBP6546P_RS21840 (XppCFBP6546P_22685) | 2298..2537 | + | 240 | WP_039572160.1 | hypothetical protein | - |
| XppCFBP6546P_RS21845 (XppCFBP6546P_22690) | 2551..3144 | + | 594 | WP_039572164.1 | hypothetical protein | - |
| XppCFBP6546P_RS21850 (XppCFBP6546P_22695) | 3242..3586 | + | 345 | WP_039572167.1 | hypothetical protein | - |
| XppCFBP6546P_RS21855 (XppCFBP6546P_22700) | 3698..4282 | + | 585 | WP_039572170.1 | DUF6012 family protein | - |
| XppCFBP6546P_RS21860 (XppCFBP6546P_22705) | 4636..4884 | + | 249 | Protein_9 | hypothetical protein | - |
| XppCFBP6546P_RS21865 (XppCFBP6546P_22710) | 4955..6042 | + | 1088 | WP_099770620.1 | IS3 family transposase ISXac2 | Transposase |
| XppCFBP6546P_RS21870 (XppCFBP6546P_22715) | 6075..6656 | + | 582 | Protein_11 | hypothetical protein | - |
| XppCFBP6546P_RS21875 (XppCFBP6546P_24150) | 7264..7602 | - | 339 | WP_099859120.1 | hypothetical protein | - |
| XppCFBP6546P_RS21880 (XppCFBP6546P_24155) | 7674..8309 | + | 636 | WP_039572177.1 | ParA family partition ATPase | - |
| XppCFBP6546P_RS21885 (XppCFBP6546P_22730) | 8306..8641 | + | 336 | WP_039572180.1 | hypothetical protein | - |
| XppCFBP6546P_RS21890 (XppCFBP6546P_22740) | 8885..9349 | + | 465 | WP_022557748.1 | DUF2840 domain-containing protein | - |
| XppCFBP6546P_RS21895 (XppCFBP6546P_22745) | 9354..9950 | + | 597 | WP_080948837.1 | S26 family signal peptidase | - |
| XppCFBP6546P_RS21900 (XppCFBP6546P_22750) | 9943..10533 | + | 591 | WP_052756669.1 | Type IV secretion system protein virB1 | VF |
| XppCFBP6546P_RS21905 (XppCFBP6546P_22755) | 10820..13774 | + | 2955 | WP_227479506.1 | hypothetical protein | Relaxase |
| XppCFBP6546P_RS22730 | 13842..15830 | + | 1989 | WP_227479507.1 | Conjugal transfer protein TraG | VF |
| XppCFBP6546P_RS21915 (XppCFBP6546P_22765) | 15827..16318 | + | 492 | WP_017171863.1 | hypothetical protein | - |
| XppCFBP6546P_RS21920 (XppCFBP6546P_22770) | 16351..16890 | + | 540 | WP_022557742.1 | plasmid pRiA4b ORF-3 family protein | - |
| XppCFBP6546P_RS21925 (XppCFBP6546P_22775) | 17056..17367 | - | 312 | WP_099802907.1 | hypothetical protein | - |
| XppCFBP6546P_RS21930 (XppCFBP6546P_22780) | 17399..18625 | + | 1227 | WP_011345585.1 | IS256 family transposase ISXax1 | Transposase |
| XppCFBP6546P_RS21935 (XppCFBP6546P_22785) | 19007..19453 | + | 447 | WP_039572194.1 | avidin/streptavidin family protein | - |
| XppCFBP6546P_RS21940 (XppCFBP6546P_22790) | 19596..19985 | + | 390 | WP_039587855.1 | hypothetical protein | - |
| XppCFBP6546P_RS21945 (XppCFBP6546P_22795) | 20561..21379 | + | 819 | WP_039587854.1 | hypothetical protein | - |
| XppCFBP6546P_RS21950 (XppCFBP6546P_22800) | 22082..22291 | + | 210 | WP_017164018.1 | helix-turn-helix transcriptional regulator | - |
| XppCFBP6546P_RS21955 (XppCFBP6546P_22805) | 22376..23380 | + | 1005 | WP_103412548.1 | Putative conjugal transfer protein | VF |
| XppCFBP6546P_RS21960 (XppCFBP6546P_22810) | 23455..23775 | + | 321 | WP_017162817.1 | TrbC/VirB2 family protein | - |
| XppCFBP6546P_RS21965 (XppCFBP6546P_22815) | 23778..24044 | + | 267 | WP_227479455.1 | VirB3 family type IV secretion system protein | - |
| XppCFBP6546P_RS21970 (XppCFBP6546P_22820) | 24111..26681 | + | 2571 | WP_039570074.1 | DUF853 family protein | - |
| XppCFBP6546P_RS21975 (XppCFBP6546P_22825) | 26700..27473 | + | 774 | WP_039570072.1 | conjugal transfer protein | - |
| XppCFBP6546P_RS21980 (XppCFBP6546P_24165) | 27470..27823 | + | 354 | WP_127446653.1 | hypothetical protein | - |
| XppCFBP6546P_RS21985 (XppCFBP6546P_22830) | 28041..29519 | + | 1479 | WP_046735871.1 | P-type conjugative transfer protein TrbL | - |
| XppCFBP6546P_RS21990 (XppCFBP6546P_22835) | 29526..30236 | + | 711 | WP_039574290.1 | conjugal transfer protein TrbF | - |
| XppCFBP6546P_RS21995 (XppCFBP6546P_22840) | 30263..31255 | + | 993 | WP_017164024.1 | P-type conjugative transfer protein TrbG | - |
| XppCFBP6546P_RS22000 (XppCFBP6546P_22845) | 31271..32623 | + | 1353 | WP_046735872.1 | TrbI/VirB10 family protein | - |
| XppCFBP6546P_RS22005 (XppCFBP6546P_22850) | 32814..33002 | + | 189 | WP_228329193.1 | hypothetical protein | - |
| XppCFBP6546P_RS22010 (XppCFBP6546P_22855) | 33013..33252 | + | 240 | WP_005997461.1 | hypothetical protein | - |
| XppCFBP6546P_RS22015 (XppCFBP6546P_22860) | 33325..33573 | + | 249 | WP_033481882.1 | hypothetical protein | - |
| XppCFBP6546P_RS22020 (XppCFBP6546P_22865) | 33575..34429 | + | 855 | WP_022557737.1 | DNA topoisomerase | - |
| XppCFBP6546P_RS22025 (XppCFBP6546P_22870) | 34804..36123 | + | 1320 | WP_022557736.1 | right-handed parallel beta-helix repeat-containing protein | - |
| XppCFBP6546P_RS22030 (XppCFBP6546P_22875) | 36250..37542 | + | 1293 | WP_033481893.1 | M12 family metallo-peptidase | - |
| XppCFBP6546P_RS22035 (XppCFBP6546P_22880) | 37697..38245 | + | 549 | WP_022557734.1 | DNA topoisomerase | - |
| XppCFBP6546P_RS22040 (XppCFBP6546P_22885) | 38294..38431 | + | 138 | Protein_45 | IS3 family transposase ISXcd1 | Transposase |
| XppCFBP6546P_RS22045 (XppCFBP6546P_22890) | 38506..39060 | - | 555 | WP_033482006.1 | plasmid pRiA4b ORF-3 family protein | - |
| XppCFBP6546P_RS22050 (XppCFBP6546P_22895) | 39074..39490 | - | 417 | WP_022557732.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| XppCFBP6546P_RS22055 (XppCFBP6546P_22900) | 39487..39741 | - | 255 | WP_022557731.1 | plasmid stability protein | Antitoxin Detail |
| XppCFBP6546P_RS22060 (XppCFBP6546P_22905) | 39953..40546 | + | 594 | WP_022560487.1 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| XppCFBP6546P_RS22065 (XppCFBP6546P_22910) | 40543..43572 | + | 3030 | WP_022560486.1 | Tn3 family transposase ISPsy42 | Transposase |
| XppCFBP6546P_RS22070 (XppCFBP6546P_24170) | 43605..43990 | + | 386 | Protein_51 | IS3 family transposase ISXcd1 | Transposase |
| XppCFBP6546P_RS22075 (XppCFBP6546P_22920) | 44059..45146 | + | 1088 | WP_087944778.1 | IS3 family transposase ISXac2 | Transposase |
| XppCFBP6546P_RS22080 (XppCFBP6546P_22925) | 45210..45734 | - | 525 | Protein_53 | Type IV secretion system protein virB1 | VF |
| XppCFBP6546P_RS22085 (XppCFBP6546P_22930) | 45808..46284 | - | 477 | WP_039575298.1 | hypothetical protein | - |
| XppCFBP6546P_RS22090 (XppCFBP6546P_22935) | 47836..48249 | + | 414 | WP_226982528.1 | hypothetical protein | - |
| XppCFBP6546P_RS22095 (XppCFBP6546P_24175) | 48246..48473 | + | 228 | WP_039575439.1 | hypothetical protein | - |
| XppCFBP6546P_RS22100 (XppCFBP6546P_22940) | 48454..49680 | + | 1227 | WP_099770615.1 | IS256 family transposase ISXax1 | Transposase |
| XppCFBP6546P_RS22105 (XppCFBP6546P_22945) | 49756..50223 | + | 468 | WP_236493614.1 | hypothetical protein | - |
| XppCFBP6546P_RS22110 (XppCFBP6546P_22950) | 50365..50676 | + | 312 | WP_039573986.1 | hypothetical protein | - |
| XppCFBP6546P_RS22115 (XppCFBP6546P_22955) | 50673..50903 | + | 231 | WP_039573988.1 | hypothetical protein | - |
| XppCFBP6546P_RS22120 (XppCFBP6546P_22960) | 50947..51267 | + | 321 | WP_007968840.1 | hypothetical protein | - |
| XppCFBP6546P_RS22125 (XppCFBP6546P_22965) | 51427..52467 | + | 1041 | WP_039573995.1 | acyltransferase | - |
| XppCFBP6546P_RS22130 (XppCFBP6546P_24180) | 52571..52699 | - | 129 | Protein_63 | IS5/IS1182 family transposase | - |
| XppCFBP6546P_RS22135 (XppCFBP6546P_22970) | 52740..53965 | + | 1226 | Protein_64 | IS256 family transposase ISXax1 | Transposase |
| XppCFBP6546P_RS22735 | 54064..54351 | + | 288 | WP_080576246.1 | hypothetical protein | - |
| XppCFBP6546P_RS22140 (XppCFBP6546P_24185) | 54407..54742 | + | 336 | WP_204250667.1 | hypothetical protein | - |
| XppCFBP6546P_RS22150 (XppCFBP6546P_22990) | 56018..56431 | + | 414 | WP_236493383.1 | hypothetical protein | - |
| XppCFBP6546P_RS22155 (XppCFBP6546P_22995) | 56555..57649 | - | 1095 | WP_157926052.1 | BsuBI/PstI family type II restriction endonuclease | - |
| XppCFBP6546P_RS22160 (XppCFBP6546P_23000) | 57646..59457 | - | 1812 | WP_039572147.1 | Eco57I restriction-modification methylase domain-containing protein | - |
| XppCFBP6546P_RS22165 (XppCFBP6546P_23005) | 59433..59627 | - | 195 | WP_080948835.1 | ribbon-helix-helix domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|