MGE detailed information
MGE type: Genomic_island MGE length: 67159 bp
Accession: NZ_CP020933 Location: 1274251..1341409 Organism: Escherichia coli strain HB-Coli0 Replicon: chromosome
Accession: NZ_CP020933 Location: 1274251..1341409 Organism: Escherichia coli strain HB-Coli0 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B9W17_RS06100 () | 1269293..1269856 | + | 564 | WP_001115140.1 | type II secretion system minor pseudopilin GspH | - |
| B9W17_RS06105 () | 1269853..1270224 | + | 372 | WP_000820125.1 | type II secretion system minor pseudopilin GspI | - |
| B9W17_RS06110 () | 1270221..1270820 | + | 600 | WP_001255040.1 | type II secretion system minor pseudopilin GspJ | - |
| B9W17_RS06115 () | 1270823..1271800 | + | 978 | WP_000633238.1 | type II secretion system minor pseudopilin GspK | - |
| B9W17_RS06120 () | 1271797..1272975 | + | 1179 | WP_000094973.1 | type II secretion system protein GspL | - |
| B9W17_RS06125 () | 1272977..1273513 | + | 537 | WP_000942799.1 | GspM family type II secretion system protein YghD | - |
| B9W17_RS06135 () | 1273928..1274254 | - | 327 | WP_000779483.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| B9W17_RS06140 () | 1274251..1274514 | - | 264 | WP_025492088.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| B9W17_RS06145 () | 1274586..1275452 | - | 867 | WP_032153714.1 | DUF4942 domain-containing protein | - |
| B9W17_RS06150 () | 1275537..1275734 | - | 198 | WP_000839265.1 | DUF957 domain-containing protein | - |
| B9W17_RS06155 () | 1275746..1276237 | - | 492 | WP_023155722.1 | hypothetical protein | - |
| B9W17_RS06160 () | 1276234..1276611 | - | 378 | WP_000854735.1 | TA system toxin CbtA family protein | Toxin Detail |
| B9W17_RS06165 () | 1276658..1277032 | - | 375 | WP_032153712.1 | type IV toxin-antitoxin system toxin CbtA | Antitoxin Detail |
| B9W17_RS06170 () | 1277112..1277333 | - | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| B9W17_RS06175 () | 1277402..1277878 | - | 477 | WP_001186715.1 | RadC family protein | - |
| B9W17_RS06180 () | 1277894..1278379 | - | 486 | WP_032153711.1 | antirestriction protein | - |
| B9W17_RS06185 () | 1278471..1279289 | - | 819 | WP_001234693.1 | DUF945 domain-containing protein | - |
| B9W17_RS06190 () | 1279380..1279589 | - | 210 | WP_023155727.1 | DUF905 family protein | - |
| B9W17_RS06195 () | 1279619..1280296 | - | 678 | WP_023155728.1 | hypothetical protein | - |
| B9W17_RS06200 () | 1280415..1281299 | - | 885 | WP_024166630.1 | 50S ribosome-binding GTPase | - |
| B9W17_RS06205 () | 1281406..1282338 | + | 933 | WP_023155730.1 | hypothetical protein | - |
| B9W17_RS06210 () | 1282335..1283144 | - | 810 | WP_032153709.1 | hypothetical protein | - |
| B9W17_RS06225 () | 1284895..1285626 | + | 732 | WP_032153707.1 | inovirus Gp2 family protein | - |
| B9W17_RS06230 () | 1285720..1286377 | - | 658 | Protein_1184 | transposase | - |
| B9W17_RS06235 () | 1286811..1288415 | + | 1605 | WP_001067608.1 | DUF3987 domain-containing protein | - |
| B9W17_RS06240 () | 1290012..1290578 | + | 567 | WP_032153705.1 | inovirus-type Gp2 protein | - |
| B9W17_RS25120 () | 1290698..1290847 | - | 150 | WP_001421645.1 | hypothetical protein | - |
| B9W17_RS06245 () | 1290862..1291434 | + | 573 | WP_032153703.1 | hypothetical protein | - |
| B9W17_RS06250 () | 1291503..1291739 | + | 237 | WP_000958154.1 | AlpA family transcriptional regulator | - |
| B9W17_RS06255 () | 1292008..1292556 | + | 549 | WP_032153702.1 | hypothetical protein | - |
| B9W17_RS25300 () | 1292575..1292823 | - | 249 | WP_001349534.1 | osmoprotectant transport activator ProQ | - |
| B9W17_RS25305 () | 1292892..1293083 | - | 192 | WP_001323513.1 | hypothetical protein | - |
| B9W17_RS06275 () | 1293486..1294177 | - | 692 | Protein_1193 | IS1 family transposase | - |
| B9W17_RS06280 () | 1294237..1294413 | + | 177 | Protein_1194 | transketolase family protein | - |
| B9W17_RS06285 () | 1294676..1294789 | + | 114 | WP_131501864.1 | transposase | - |
| B9W17_RS06300 () | 1295640..1296206 | + | 567 | WP_000919994.1 | hypothetical protein | - |
| B9W17_RS06310 () | 1296447..1297262 | + | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| B9W17_RS06315 () | 1297323..1298126 | + | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| B9W17_RS06320 () | 1298126..1298962 | + | 837 | WP_000480968.1 | hypothetical protein | ARG |
| B9W17_RS06330 () | 1299268..1299510 | + | 243 | WP_000844627.1 | transposase | - |
| B9W17_RS06335 () | 1299542..1300192 | - | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| B9W17_RS06340 () | 1300298..1301497 | + | 1200 | WP_032153701.1 | Tetracycline resistance protein, class C | ARG |
| B9W17_RS06345 () | 1301464..1301652 | - | 189 | Protein_1203 | IS91 family transposase | - |
| B9W17_RS06350 () | 1301764..1302069 | - | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| B9W17_RS06355 () | 1302097..1303311 | - | 1215 | WP_023300759.1 | Bicyclomycin resistance protein | ARG |
| B9W17_RS25310 () | 1303528..1303974 | - | 447 | Protein_1206 | DUF3363 domain-containing protein | - |
| B9W17_RS06365 () | 1304443..1305099 | - | 657 | Protein_1207 | IS91-like element ISVsa3 family transposase | - |
| B9W17_RS06370 () | 1305033..1305311 | - | 279 | WP_001349530.1 | P fimbrial regulatory protein KS71A | VF |
| B9W17_RS06385 () | 1305734..1306048 | + | 315 | WP_000930062.1 | Major pilu subunit operon regulatory protein PapB | VF |
| B9W17_RS06390 () | 1306255..1306518 | + | 264 | Protein_1210 | Pap fimbrial major pilin protein | VF |
| B9W17_RS06400 () | 1306969..1308201 | - | 1233 | WP_000271619.1 | dNTP triphosphohydrolase | - |
| B9W17_RS06405 () | 1308352..1309513 | - | 1162 | Protein_1212 | IS3 family transposase IS3 | Transposase |
| B9W17_RS06410 () | 1309681..1310661 | + | 981 | WP_000174035.1 | thymidylate synthase | - |
| B9W17_RS06415 () | 1310658..1311602 | + | 945 | WP_000820616.1 | hypothetical protein | - |
| B9W17_RS06420 () | 1311605..1312687 | - | 1083 | WP_000637419.1 | XRE family transcriptional regulator | - |
| B9W17_RS06430 () | 1313154..1313420 | + | 267 | WP_032153698.1 | MazG-like family protein | - |
| B9W17_RS06435 () | 1313720..1314234 | - | 515 | Protein_1217 | ISL3 family transposase ISEc38 | Transposase |
| B9W17_RS06445 () | 1314842..1318255 | + | 3414 | WP_000438165.1 | DEAD/DEAH box helicase family protein | - |
| B9W17_RS06450 () | 1318319..1319953 | + | 1635 | WP_000627728.1 | type I restriction-modification system subunit M | - |
| B9W17_RS06455 () | 1319950..1321092 | + | 1143 | WP_000742120.1 | restriction endonuclease subunit S | - |
| B9W17_RS06460 () | 1321101..1322723 | + | 1623 | WP_000778955.1 | AAA family ATPase | - |
| B9W17_RS06465 () | 1322723..1323619 | + | 897 | WP_000499115.1 | hypothetical protein | - |
| B9W17_RS06470 () | 1323842..1324071 | - | 230 | Protein_1223 | integrase | - |
| B9W17_RS06475 () | 1324250..1324987 | + | 738 | WP_001398114.1 | porin family protein | - |
| B9W17_RS06480 () | 1325407..1326303 | + | 897 | WP_000228490.1 | WYL domain-containing protein | - |
| B9W17_RS06485 () | 1326352..1327431 | + | 1080 | WP_001207396.1 | hypothetical protein | - |
| B9W17_RS06490 () | 1327478..1329049 | + | 1572 | WP_001100182.1 | ATP--cob(I)alamin adenosyltransferase | - |
| B9W17_RS06495 () | 1329046..1329312 | + | 267 | WP_000766274.1 | YkgJ family cysteine cluster protein | - |
| B9W17_RS06500 () | 1329452..1329649 | + | 198 | WP_001238004.1 | hypothetical protein | - |
| B9W17_RS06510 () | 1329702..1331375 | + | 1674 | WP_025492097.1 | phosphoethanolamine transferase | - |
| B9W17_RS06515 () | 1331519..1332553 | - | 1035 | WP_032153697.1 | tetratricopeptide repeat family protein | - |
| B9W17_RS06520 () | 1332603..1332964 | + | 362 | Protein_1232 | IS1 family transposase IS1A | Transposase |
| B9W17_RS25130 () | 1332953..1333240 | + | 288 | Protein_1233 | integrase core domain-containing protein | - |
| B9W17_RS06530 () | 1333818..1335212 | - | 1395 | WP_001037798.1 | carbohydrate porin | - |
| B9W17_RS06535 () | 1335407..1336840 | - | 1434 | WP_024144973.1 | glycoside hydrolase family 32 protein | - |
| B9W17_RS06540 () | 1336837..1338114 | - | 1278 | WP_001083368.1 | MFS transporter | - |
| B9W17_RS06545 () | 1338177..1340303 | - | 2127 | WP_000253907.1 | alpha-galactosidase | - |
| B9W17_RS06550 () | 1340399..1341409 | - | 1011 | WP_000053331.1 | substrate-binding domain-containing protein | - |
| B9W17_RS06555 () | 1341559..1342743 | - | 1185 | WP_001218742.1 | tyrosine-type recombinase/integrase | - |
| B9W17_RS06565 () | 1343101..1343808 | - | 708 | WP_000234514.1 | DUF554 domain-containing protein | - |
| B9W17_RS25430 () | 1343961..1344044 | + | 84 | WP_211180506.1 | protein YqgH | - |
| B9W17_RS06570 () | 1344206..1346341 | + | 2136 | WP_001472260.1 | ornithine decarboxylase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|