MGE detailed information
MGE type: Genomic_island MGE length: 29547 bp
Accession: NZ_CP020885 Location: 1909504..1939050 Organism: Xanthomonas citri pv. citri strain TX160149 Replicon: chromosome
Accession: NZ_CP020885 Location: 1909504..1939050 Organism: Xanthomonas citri pv. citri strain TX160149 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B7L66_RS08580 () | 1905297..1906955 | + | 1659 | WP_011051595.1 | MCP four helix bundle domain-containing protein | - |
| B7L66_RS08585 () | 1906967..1907476 | + | 510 | WP_011051594.1 | chemotaxis protein CheW | - |
| B7L66_RS08590 () | 1907519..1908625 | - | 1107 | WP_016849926.1 | diguanylate cyclase | - |
| B7L66_RS26350 () | 1908908..1909084 | - | 177 | WP_003485979.1 | hypothetical protein | - |
| B7L66_RS08595 () | 1909504..1911621 | - | 2118 | WP_059032119.1 | ATP-binding protein | - |
| B7L66_RS08600 () | 1911618..1913012 | - | 1395 | WP_011051590.1 | SIR2 family protein | - |
| B7L66_RS08605 () | 1913591..1913824 | - | 234 | WP_040107635.1 | hypothetical protein | - |
| B7L66_RS08610 () | 1914057..1915058 | + | 1002 | WP_011051588.1 | replication protein | - |
| B7L66_RS08615 () | 1915457..1915717 | - | 261 | WP_015463320.1 | hypothetical protein | - |
| B7L66_RS08620 () | 1916278..1916478 | + | 201 | WP_011051587.1 | ribbon-helix-helix protein, CopG family | - |
| B7L66_RS08625 () | 1916453..1916847 | + | 395 | Protein_1605 | relaxase | - |
| B7L66_RS08630 () | 1916870..1917280 | - | 411 | WP_011051586.1 | plasmid pRiA4b ORF-3 family protein | - |
| B7L66_RS08635 () | 1917384..1917713 | - | 330 | WP_015463316.1 | hypothetical protein | - |
| B7L66_RS08640 () | 1917722..1918639 | - | 918 | WP_011051584.1 | XamI family restriction endonuclease | - |
| B7L66_RS08645 () | 1918636..1920222 | - | 1587 | WP_011051583.1 | N-6 DNA methylase | - |
| B7L66_RS08650 () | 1920329..1920517 | - | 189 | WP_011051582.1 | hypothetical protein | - |
| B7L66_RS08655 () | 1920568..1922676 | - | 2109 | WP_015472116.1 | AAA family ATPase | - |
| B7L66_RS08660 () | 1922866..1923804 | - | 939 | WP_043930788.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| B7L66_RS08665 () | 1924440..1925665 | - | 1226 | Protein_1613 | IS3 family transposase ISJsp1 | Transposase |
| B7L66_RS08670 () | 1925714..1926913 | + | 1200 | Protein_1614 | Tn3 family transposase ISPsy42 | Transposase |
| B7L66_RS08675 () | 1927032..1928408 | + | 1377 | WP_011347842.1 | IS5 family transposase ISXca5 | Transposase |
| B7L66_RS08680 () | 1928672..1928950 | + | 279 | WP_004541313.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| B7L66_RS08685 () | 1928938..1929228 | + | 291 | WP_011051576.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| B7L66_RS08690 () | 1929225..1929545 | + | 321 | WP_099522003.1 | hypothetical protein | - |
| B7L66_RS08695 () | 1929816..1929995 | + | 180 | WP_015463309.1 | hypothetical protein | - |
| B7L66_RS08700 () | 1930208..1931295 | + | 1088 | Protein_1620 | IS3 family transposase ISXcd1 | Transposase |
| B7L66_RS08705 () | 1931335..1932468 | + | 1134 | Protein_1621 | IS5 family transposase ISXo4 | Transposase |
| B7L66_RS08710 () | 1932760..1932953 | + | 194 | Protein_1622 | hypothetical protein | - |
| B7L66_RS08715 () | 1933060..1933428 | - | 369 | WP_015472110.1 | hypothetical protein | - |
| B7L66_RS08720 () | 1934356..1934877 | - | 522 | WP_011051570.1 | hypothetical protein | - |
| B7L66_RS08725 () | 1934887..1937058 | - | 2172 | WP_011051569.1 | DotA/TraY family protein | - |
| B7L66_RS08735 () | 1937959..1939050 | - | 1092 | WP_015463304.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| B7L66_RS08745 () | 1939339..1939740 | - | 402 | WP_003485983.1 | H-NS histone family protein | - |
| B7L66_RS08750 () | 1939960..1940136 | + | 177 | WP_011051567.1 | DUF3606 domain-containing protein | - |
| B7L66_RS08755 () | 1940152..1942769 | + | 2618 | Protein_1629 | DNA ligase D | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Xanthomonas axonopodis pv. citri str. 306 | Genomic island | TA20720 | NC_003919 | 2820490..2847010 | 0.004 |