MGE detailed information
MGE type: Genomic_island MGE length: 37634 bp
Accession: NZ_CP020370 Location: 1052004..1089637 Organism: Candidatus Thiodictyon syntrophicum strain Cad16T Replicon: chromosome
Accession: NZ_CP020370 Location: 1052004..1089637 Organism: Candidatus Thiodictyon syntrophicum strain Cad16T Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| THSYN_RS04620 () | 1047446..1048228 | + | 783 | WP_100922298.1 | DUF2272 domain-containing protein | - |
| THSYN_RS04625 () | 1048244..1049323 | + | 1080 | WP_100918101.1 | efflux RND transporter periplasmic adaptor subunit | - |
| THSYN_RS04630 () | 1049710..1051467 | + | 1758 | WP_100918102.1 | ATP-binding cassette domain-containing protein | - |
| THSYN_RS04635 () | 1051616..1051933 | + | 318 | WP_100918103.1 | nucleotidyltransferase domain-containing protein | - |
| THSYN_RS04645 () | 1052342..1052641 | + | 300 | WP_100918104.1 | SH3 domain-containing protein | - |
| THSYN_RS04650 () | 1052704..1053342 | + | 639 | WP_157817456.1 | M15 family metallopeptidase | - |
| THSYN_RS04655 () | 1053339..1054118 | - | 780 | WP_100918106.1 | Uma2 family endonuclease | - |
| THSYN_RS04665 () | 1055231..1056298 | - | 1068 | WP_100918107.1 | NAD-dependent epimerase/dehydratase family protein | - |
| THSYN_RS04670 () | 1056303..1057343 | - | 1041 | WP_100918108.1 | ABC transporter ATP-binding protein | - |
| THSYN_RS33435 () | 1058132..1059127 | - | 996 | WP_157817457.1 | hypothetical protein | - |
| THSYN_RS33440 () | 1059228..1060877 | - | 1650 | WP_157817458.1 | hypothetical protein | - |
| THSYN_RS04675 () | 1060945..1061955 | - | 1011 | WP_100917404.1 | IS1 family transposase | - |
| THSYN_RS04680 () | 1063608..1063867 | + | 260 | Protein_926 | ABC transporter permease | - |
| THSYN_RS04685 () | 1063949..1064197 | + | 249 | WP_100918109.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| THSYN_RS04690 () | 1064197..1064619 | + | 423 | WP_100918110.1 | type II toxin-antitoxin system VapC family toxin | - |
| THSYN_RS04695 () | 1064728..1066149 | + | 1422 | WP_100918111.1 | glutamate--tRNA ligase | - |
| THSYN_RS04700 () | 1066222..1067802 | + | 1581 | WP_157817459.1 | hypothetical protein | - |
| THSYN_RS04705 () | 1067799..1068410 | + | 612 | WP_100918113.1 | hypothetical protein | - |
| THSYN_RS04710 () | 1068908..1070551 | - | 1644 | WP_100918114.1 | ATP-binding protein | - |
| THSYN_RS04715 () | 1070680..1071921 | + | 1242 | WP_100918115.1 | DNA polymerase IV | - |
| THSYN_RS04720 () | 1072601..1073611 | - | 1011 | WP_100918116.1 | IS1 family transposase | - |
| THSYN_RS04725 () | 1073696..1074037 | - | 342 | WP_100918117.1 | hypothetical protein | - |
| THSYN_RS04730 () | 1074037..1074774 | - | 738 | WP_100918118.1 | abortive infection family protein | - |
| THSYN_RS04735 () | 1074771..1077707 | - | 2937 | WP_100918119.1 | class I SAM-dependent DNA methyltransferase | - |
| THSYN_RS04740 () | 1077744..1078364 | - | 621 | WP_157817460.1 | hypothetical protein | - |
| THSYN_RS04745 () | 1078535..1078825 | - | 291 | WP_100918121.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| THSYN_RS04750 () | 1078818..1079141 | - | 324 | WP_100918122.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| THSYN_RS04755 () | 1079372..1081621 | + | 2250 | WP_100918123.1 | DNA topoisomerase IV subunit A | - |
| THSYN_RS04760 () | 1081836..1082128 | + | 293 | Protein_942 | AAA family ATPase | - |
| THSYN_RS33445 () | 1082143..1082343 | - | 201 | Protein_943 | Abi family protein | - |
| THSYN_RS04770 () | 1082347..1083063 | - | 717 | WP_100918124.1 | M48 family metallopeptidase | - |
| THSYN_RS04775 () | 1083063..1086182 | - | 3120 | WP_100918125.1 | type I restriction endonuclease subunit R | - |
| THSYN_RS04780 () | 1086261..1087310 | - | 1050 | WP_100918126.1 | virulence RhuM family protein | - |
| THSYN_RS04785 () | 1087307..1088005 | - | 699 | WP_100918127.1 | restriction endonuclease subunit S | - |
| THSYN_RS04795 () | 1088567..1089637 | - | 1071 | WP_100918129.1 | DUF1016 family protein | - |
| THSYN_RS04800 () | 1089628..1092108 | - | 2481 | WP_100918130.1 | N-6 DNA methylase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|