MGE detailed information
MGE type: IScluster/Tn MGE length: 20490 bp
Accession: NZ_CP020087 Location: 125489..145978 Organism: Shigella flexneri 1a strain 0670 Replicon: plasmid unnamed1
Accession: NZ_CP020087 Location: 125489..145978 Organism: Shigella flexneri 1a strain 0670 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B4376_RS26020 (B4376_26160) | 121560..122540 | + | 981 | WP_000431558.1 | ParB family protein | - |
| B4376_RS26025 (B4376_26165) | 122796..123281 | + | 486 | WP_000003223.1 | IS110 family transposase | - |
| B4376_RS26030 (B4376_26170) | 123308..123487 | - | 180 | Protein_158 | transposase domain-containing protein | - |
| B4376_RS26035 (B4376_26175) | 123570..124697 | - | 1128 | WP_014526552.1 | group II intron reverse transcriptase/maturase | - |
| B4376_RS28620 | 124619..124957 | + | 339 | WP_227804374.1 | hypothetical protein | - |
| B4376_RS26045 (B4376_26185) | 125273..125452 | - | 180 | Protein_161 | IS66 family transposase | - |
| B4376_RS26050 (B4376_26190) | 125489..126698 | - | 1210 | Protein_162 | IS3 family transposase | - |
| B4376_RS26055 | 126755..127051 | - | 297 | Protein_163 | DDE-type integrase/transposase/recombinase | - |
| B4376_RS26060 (B4376_26200) | 127167..127355 | + | 189 | WP_000957853.1 | hypothetical protein | - |
| B4376_RS26065 (B4376_26205) | 127365..128564 | + | 1200 | WP_000947175.1 | IS91 family transposase | - |
| B4376_RS26070 (B4376_26210) | 128737..129491 | - | 755 | Protein_166 | IS3 family transposase IS150 | Transposase |
| B4376_RS26075 (B4376_26215) | 129502..129861 | + | 360 | Protein_167 | IS21 family transposase IS100 | Transposase |
| B4376_RS26080 (B4376_26220) | 129854..130642 | - | 789 | WP_005116773.1 | AraC family invasion system transcriptional regulator VirF | - |
| B4376_RS26085 (B4376_26225) | 131071..131472 | + | 402 | Protein_169 | integrase core domain-containing protein | - |
| B4376_RS26090 (B4376_26230) | 131654..131920 | + | 267 | WP_000957712.1 | hypothetical protein | VF |
| B4376_RS26095 (B4376_26235) | 132110..132807 | + | 698 | WP_227804301.1 | IS1 family transposase IS1X2 | Transposase |
| B4376_RS26100 (B4376_26240) | 133068..134264 | - | 1197 | WP_005085088.1 | IS110 family transposase ISSfl4 | Transposase |
| B4376_RS26105 (B4376_26245) | 134600..136291 | + | 1692 | WP_094092434.1 | putative E3 ubiquitin-protein ligase ipaH7.8 | VF |
| B4376_RS26110 (B4376_26250) | 136343..137551 | + | 1209 | Protein_174 | IS3 family transposase | - |
| B4376_RS26115 (B4376_26255) | 137594..138117 | - | 524 | Protein_175 | IS3 family transposase ISSfl11 | Transposase |
| B4376_RS26120 (B4376_26260) | 138185..138667 | - | 483 | WP_000405245.1 | GNAT family N-acetyltransferase | Toxin Detail |
| B4376_RS26125 (B4376_26265) | 138658..138960 | - | 303 | WP_010921625.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| B4376_RS26135 (B4376_26275) | 139232..139504 | + | 273 | WP_000019158.1 | hypothetical protein | - |
| B4376_RS26140 (B4376_26280) | 139485..140693 | + | 1209 | WP_000198552.1 | IS91 family transposase ISSbo1 | Transposase |
| B4376_RS28040 | 140865..140993 | + | 129 | Protein_180 | IS5 family transposase ISSfl7 | Transposase |
| B4376_RS26150 (B4376_26290) | 141142..142596 | - | 1455 | WP_000701108.1 | hypothetical protein | VF |
| B4376_RS26155 (B4376_26295) | 143000..143619 | + | 620 | Protein_182 | IS1 family transposase IS1X2 | Transposase |
| B4376_RS26160 (B4376_26300) | 143669..144878 | + | 1210 | Protein_183 | IS3 family transposase | - |
| B4376_RS26165 (B4376_26305) | 144922..145332 | + | 411 | Protein_184 | IS66 family transposase ISEc23 | Transposase |
| B4376_RS26170 (B4376_26310) | 145364..145978 | + | 615 | Protein_185 | IS21 family transposase ISEc10 | Transposase |
| B4376_RS26175 (B4376_26315) | 146147..150241 | - | 4095 | WP_001034121.1 | serine protease autotransporter toxin SepA | - |
| B4376_RS26185 (B4376_26325) | 150643..150831 | + | 189 | WP_000957853.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|