MGE detailed information
MGE type: Genomic_island MGE length: 9352 bp
Accession: NZ_CP019256 Location: 1181049..1190400 Organism: Escherichia coli strain 13TMH22 Replicon: chromosome
Accession: NZ_CP019256 Location: 1181049..1190400 Organism: Escherichia coli strain 13TMH22 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BWI85_RS06315 () | 1176210..1177511 | + | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
| BWI85_RS06320 () | 1177627..1177965 | + | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| BWI85_RS06325 () | 1177941..1179638 | + | 1698 | WP_000068932.1 | protein-disulfide reductase DsbD | - |
| BWI85_RS06330 () | 1179675..1180250 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| BWI85_RS06345 () | 1181049..1182587 | + | 1539 | WP_001187183.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| BWI85_RS06355 () | 1182953..1184287 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| BWI85_RS06360 () | 1184367..1186514 | + | 2148 | WP_001697603.1 | lysine decarboxylase CadA | - |
| BWI85_RS06365 () | 1186573..1188030 | + | 1458 | WP_000856832.1 | dipeptide/tripeptide permease DtpC | - |
| BWI85_RS06370 () | 1188267..1189784 | + | 1518 | WP_001295087.1 | lysine--tRNA ligase | - |
| BWI85_RS06375 () | 1189903..1190076 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| BWI85_RS06380 () | 1190104..1190400 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| BWI85_RS06390 () | 1190627..1190899 | - | 273 | WP_000405647.1 | N-acetyltransferase | - |
| BWI85_RS06395 () | 1190911..1191141 | - | 231 | WP_000371698.1 | (4Fe-4S)-binding protein | - |
| BWI85_RS06400 () | 1191322..1192953 | + | 1632 | WP_001216487.1 | sensor histidine kinase | - |
| BWI85_RS06405 () | 1192950..1193669 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.007 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.007 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.007 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.007 |