MGE detailed information
MGE type: Conjugative plasmid MGE length: 121975 bp
Accession: NZ_CP019248 Location: 1..121975 Organism: Escherichia coli strain Combat13F7 Replicon: plasmid pCombat13F7-3
Accession: NZ_CP019248 Location: 1..121975 Organism: Escherichia coli strain Combat13F7 Replicon: plasmid pCombat13F7-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BWI83_RS25615 () | 1..942 | + | 942 | Protein_0 | hypothetical protein | VF |
| BWI83_RS25620 () | 960..1575 | + | 616 | Protein_1 | hypothetical protein | VF |
| BWI83_RS25625 () | 1585..2145 | + | 561 | WP_000014116.1 | hypothetical protein | VF |
| BWI83_RS25630 () | 2130..2786 | + | 657 | WP_001193554.1 | hypothetical protein | VF |
| BWI83_RS25635 () | 2786..4210 | + | 1425 | WP_001389385.1 | hypothetical protein | VF |
| BWI83_RS26985 () | 4207..4404 | - | 198 | WP_032159596.1 | hypothetical protein | - |
| BWI83_RS25650 () | 4677..4853 | - | 177 | WP_096040819.1 | shufflon protein C' | - |
| BWI83_RS25660 () | 5513..6667 | + | 1155 | WP_001139958.1 | integrase | - |
| BWI83_RS25665 () | 6818..7642 | + | 825 | WP_001238927.1 | hypothetical protein | - |
| BWI83_RS25670 () | 7728..8930 | + | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| BWI83_RS25675 () | 8990..9574 | + | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| BWI83_RS25680 () | 9969..10427 | + | 459 | WP_001079808.1 | hypothetical protein | VF |
| BWI83_RS25685 () | 10424..11242 | + | 819 | WP_000646097.1 | hypothetical protein | VF |
| BWI83_RS25690 () | 11239..12387 | + | 1149 | WP_001024972.1 | putative protein YggR | VF |
| BWI83_RS25695 () | 12384..12674 | + | 291 | WP_001299214.1 | hypothetical protein | - |
| BWI83_RS25700 () | 12689..13240 | + | 552 | WP_000014584.1 | Phospholipase D | VF |
| BWI83_RS25705 () | 13330..17097 | + | 3768 | WP_001141534.1 | DNA primase | - |
| BWI83_RS25710 () | 17115..17462 | + | 348 | WP_001055900.1 | conjugal transfer protein | - |
| BWI83_RS25715 () | 17459..18151 | + | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| BWI83_RS25720 () | 18162..19145 | + | 984 | WP_001191878.1 | hypothetical protein | VF |
| BWI83_RS25725 () | 19148..20437 | + | 1290 | WP_001271997.1 | conjugal transfer protein TraO | - |
| BWI83_RS25730 () | 20437..21141 | + | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| BWI83_RS25735 () | 21141..21668 | + | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| BWI83_RS25740 () | 21719..22123 | + | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| BWI83_RS25745 () | 22187..22375 | + | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| BWI83_RS25750 () | 22359..23159 | + | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| BWI83_RS25755 () | 23249..26293 | + | 3045 | WP_001024752.1 | IncI1-type conjugal transfer protein TraU | - |
| BWI83_RS25760 () | 26293..26907 | + | 615 | WP_148116001.1 | IncI1-type conjugal transfer protein TraV | - |
| BWI83_RS25765 () | 26874..28076 | + | 1203 | WP_089438581.1 | IncI1-type conjugal transfer protein TraW | - |
| BWI83_RS25770 () | 28105..28689 | + | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| BWI83_RS25775 () | 28786..30954 | + | 2169 | WP_000698354.1 | DotA/TraY family protein | - |
| BWI83_RS25780 () | 31025..31687 | + | 663 | WP_000644796.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| BWI83_RS25785 () | 31759..31968 | - | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| BWI83_RS26990 () | 32360..32536 | + | 177 | WP_001054897.1 | hypothetical protein | - |
| BWI83_RS25790 () | 33195..33446 | + | 252 | WP_001291964.1 | hypothetical protein | - |
| BWI83_RS25795 () | 33518..33670 | - | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| - () | 33720..33782 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 33720..33782 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 33720..33782 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 33720..33782 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| BWI83_RS25800 () | 33962..35170 | + | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| BWI83_RS25805 () | 35189..36259 | + | 1071 | WP_000151582.1 | IncI1-type conjugal transfer protein TrbB | - |
| BWI83_RS25810 () | 36252..38543 | + | 2292 | WP_001289276.1 | hypothetical protein | - |
| BWI83_RS25815 () | 38580..41279 | - | 2700 | WP_001306778.1 | Protein TraI | Relaxase |
| BWI83_RS25820 () | 41290..41622 | - | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| BWI83_RS25825 () | 41856..42191 | + | 336 | WP_000157098.1 | hypothetical protein | - |
| BWI83_RS25830 () | 42276..43124 | - | 849 | WP_001077047.1 | DUF4942 domain-containing protein | - |
| BWI83_RS26995 () | 43473..43670 | + | 198 | WP_072001441.1 | hypothetical protein | - |
| BWI83_RS25845 () | 43704..43955 | + | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| BWI83_RS27000 () | 43986..44156 | - | 171 | WP_000150325.1 | hypothetical protein | - |
| BWI83_RS25850 () | 44218..45159 | - | 942 | WP_000038339.1 | Recombination-promoting nuclease RpnA | VF |
| BWI83_RS25855 () | 45224..45490 | - | 267 | WP_001247862.1 | hypothetical protein | - |
| BWI83_RS25860 () | 45582..46016 | - | 435 | WP_000218863.1 | hypothetical protein | - |
| BWI83_RS25875 () | 46745..47245 | - | 501 | WP_000117609.1 | antirestriction protein ArdA | - |
| BWI83_RS25885 () | 47708..48304 | - | 597 | WP_089438582.1 | hypothetical protein | - |
| BWI83_RS25890 () | 48301..49020 | - | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| BWI83_RS25895 () | 49017..49451 | - | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| BWI83_RS25900 () | 49506..51464 | - | 1959 | WP_001145453.1 | ParB/RepB/Spo0J family partition protein | - |
| BWI83_RS25905 () | 51523..51756 | - | 234 | WP_000006014.1 | DUF905 domain-containing protein | - |
| BWI83_RS25910 () | 51814..52341 | - | 528 | WP_001276110.1 | single-stranded DNA-binding protein | - |
| BWI83_RS27005 () | 52710..52778 | + | 69 | Protein_56 | pilus protein | - |
| BWI83_RS25925 () | 53111..53302 | - | 192 | WP_001027500.1 | hypothetical protein | - |
| BWI83_RS25930 () | 53299..53721 | - | 423 | WP_000271729.1 | DUF1380 family protein | - |
| BWI83_RS25935 () | 53768..54070 | - | 303 | WP_072132163.1 | antirestriction protein | - |
| BWI83_RS26835 () | 54611..55381 | - | 771 | WP_001696732.1 | hypothetical protein | - |
| BWI83_RS25950 () | 55432..55866 | - | 435 | WP_000274403.1 | DUF1380 family protein | - |
| BWI83_RS25955 () | 55878..56099 | - | 222 | WP_001104887.1 | hypothetical protein | - |
| BWI83_RS25960 () | 56100..56783 | - | 684 | WP_000086178.1 | DNA methylase | - |
| BWI83_RS25965 () | 56860..57171 | - | 312 | WP_010891263.1 | hypothetical protein | - |
| BWI83_RS25970 () | 57168..58070 | - | 903 | WP_000273918.1 | DUF1281 domain-containing protein | - |
| BWI83_RS25980 () | 58488..58736 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| BWI83_RS25985 () | 58733..59170 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| BWI83_RS25990 () | 59170..60444 | + | 1275 | WP_000457492.1 | Y-family DNA polymerase | - |
| BWI83_RS25995 () | 60446..60862 | - | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| BWI83_RS26000 () | 60855..61835 | - | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| BWI83_RS26005 () | 62249..62557 | - | 309 | WP_000030199.1 | hypothetical protein | - |
| BWI83_RS26010 () | 62644..63288 | - | 645 | WP_001144036.1 | ParA family protein | - |
| BWI83_RS26015 () | 63468..64247 | - | 780 | WP_001164198.1 | site-specific integrase | - |
| BWI83_RS26020 () | 64249..64662 | - | 414 | WP_024139514.1 | hypothetical protein | - |
| BWI83_RS26025 () | 65342..66337 | + | 996 | WP_000246635.1 | hypothetical protein | - |
| BWI83_RS26030 () | 66341..67273 | + | 933 | WP_000991830.1 | hypothetical protein | - |
| BWI83_RS26035 () | 67571..68659 | + | 1089 | WP_000952231.1 | hypothetical protein | - |
| BWI83_RS26040 () | 68661..69530 | + | 870 | WP_000253407.1 | hypothetical protein | - |
| BWI83_RS26045 () | 69587..71152 | - | 1566 | WP_000741348.1 | ATP-binding protein | - |
| BWI83_RS26055 () | 71460..71690 | + | 231 | WP_001261287.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| BWI83_RS26060 () | 71687..72103 | + | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| BWI83_RS26065 () | 72265..74403 | - | 2139 | WP_000350638.1 | AAA family ATPase | - |
| BWI83_RS26070 () | 74757..75014 | + | 258 | WP_000343085.1 | hypothetical protein | - |
| BWI83_RS26075 () | 75014..75604 | + | 591 | WP_000194575.1 | hypothetical protein | - |
| BWI83_RS26080 () | 75867..77423 | + | 1557 | WP_024126035.1 | AAA family ATPase | - |
| BWI83_RS26085 () | 77614..78231 | + | 618 | WP_000521603.1 | hypothetical protein | - |
| BWI83_RS26090 () | 78524..79561 | - | 1038 | WP_044502555.1 | permease | - |
| BWI83_RS26095 () | 79666..79989 | + | 324 | WP_001175594.1 | helix-turn-helix domain-containing protein | - |
| BWI83_RS26100 () | 80090..80800 | + | 711 | WP_024159726.1 | arsenical resistance protein ArsH | - |
| BWI83_RS26105 () | 80809..81354 | + | 546 | WP_001286342.1 | sigma-70 family RNA polymerase sigma factor | - |
| BWI83_RS26110 () | 81430..81792 | + | 363 | WP_011117603.1 | arsenic metallochaperone ArsD family protein | - |
| BWI83_RS26115 () | 81819..83570 | + | 1752 | WP_023171140.1 | Arsenical pump-driving ATPase | VF |
| BWI83_RS26120 () | 83644..84012 | - | 369 | WP_011117601.1 | winged helix-turn-helix domain-containing protein | - |
| BWI83_RS26125 () | 84075..84887 | - | 813 | WP_011117600.1 | sulfite exporter TauE/SafE family protein | - |
| BWI83_RS26130 () | 85099..85635 | + | 537 | WP_011117599.1 | L-amino acid N-acyltransferase MnaT | VF |
| BWI83_RS26135 () | 85670..86095 | - | 426 | WP_011117598.1 | glutaredoxin-dependent arsenate reductase | - |
| BWI83_RS26140 () | 86108..86701 | - | 594 | Protein_97 | arsenite efflux transporter membrane subunit ArsB | - |
| BWI83_RS26145 () | 86735..89044 | - | 2310 | Protein_98 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| BWI83_RS26150 () | 89098..89802 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| BWI83_RS26160 () | 90069..91505 | + | 1437 | WP_000105383.1 | glutathione synthase | - |
| BWI83_RS26165 () | 92025..92729 | - | 705 | WP_032193599.1 | replication initiation protein | - |
| BWI83_RS26170 () | 92759..93463 | - | 705 | WP_001067858.1 | IS1380 family transposase ISEcp1 | Transposase |
| BWI83_RS26175 () | 93488..94738 | + | 1251 | WP_040178261.1 | IS1380 family transposase ISEcp1 | Transposase |
| BWI83_RS26180 () | 94978..95619 | + | 642 | WP_148116002.1 | MBL fold metallo-hydrolase | - |
| BWI83_RS27010 () | 95860..96315 | - | 456 | WP_094336655.1 | hypothetical protein | - |
| BWI83_RS26195 () | 96442..97245 | + | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| BWI83_RS26200 () | 97245..98081 | + | 837 | WP_000480968.1 | hypothetical protein | ARG |
| BWI83_RS26205 () | 98187..98888 | - | 702 | Protein_108 | arsenite efflux transporter membrane subunit ArsB | - |
| BWI83_RS26210 () | 98937..100688 | - | 1752 | WP_049884581.1 | arsenite efflux transporter ATPase subunit ArsA | - |
| BWI83_RS26215 () | 100729..101957 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| BWI83_RS26220 () | 102042..102404 | - | 363 | WP_011117596.1 | arsenite efflux transporter metallochaperone ArsD | - |
| BWI83_RS26225 () | 102452..102805 | - | 354 | WP_011117595.1 | transcriptional regulator | - |
| BWI83_RS27015 () | 102987..103174 | - | 188 | Protein_113 | hypothetical protein | - |
| BWI83_RS26240 () | 104081..105112 | - | 1032 | WP_000907863.1 | replication initiation protein | - |
| BWI83_RS26255 () | 106085..106348 | + | 264 | WP_001324596.1 | ash family protein | - |
| BWI83_RS26260 () | 106266..106553 | + | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| BWI83_RS26270 () | 106995..107528 | + | 534 | WP_001306770.1 | transcription termination factor NusG | - |
| BWI83_RS26275 () | 107781..108464 | + | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| BWI83_RS26285 () | 108637..109188 | + | 552 | WP_000744644.1 | hypothetical protein | - |
| BWI83_RS26290 () | 109351..109605 | + | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| BWI83_RS26295 () | 109772..110068 | + | 297 | WP_000494780.1 | hypothetical protein | - |
| BWI83_RS26310 () | 110987..112054 | + | 1068 | WP_001360287.1 | hypothetical protein | VF |
| BWI83_RS26315 () | 112054..112491 | + | 438 | WP_000539806.1 | hypothetical protein | VF |
| BWI83_RS26320 () | 112505..114187 | + | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| BWI83_RS26325 () | 114180..115475 | + | 1296 | WP_044502559.1 | type 4b pilus protein PilO2 | - |
| BWI83_RS26330 () | 115462..115914 | + | 453 | WP_044502560.1 | hypothetical protein | VF |
| BWI83_RS26335 () | 115925..117478 | + | 1554 | WP_044502561.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| BWI83_RS26340 () | 117491..118588 | + | 1098 | WP_044502562.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| BWI83_RS26345 () | 118606..119220 | + | 615 | WP_000959785.1 | hypothetical protein | VF |
| BWI83_RS26350 () | 119230..119791 | + | 562 | Protein_130 | hypothetical protein | VF |
| BWI83_RS26355 () | 119776..120432 | + | 657 | WP_001193554.1 | hypothetical protein | VF |
| BWI83_RS26360 () | 120432..121850 | + | 1419 | Protein_132 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|