MGE detailed information
MGE type: Conjugative plasmid MGE length: 151049 bp
Accession: NZ_CP019247 Location: 1..151049 Organism: Escherichia coli strain Combat13F7 Replicon: plasmid pCombat13F7-2
Accession: NZ_CP019247 Location: 1..151049 Organism: Escherichia coli strain Combat13F7 Replicon: plasmid pCombat13F7-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BWI83_RS24605 () | 1..261 | + | 261 | WP_000083818.1 | replication regulatory protein RepA | - |
| BWI83_RS24615 () | 487..561 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| BWI83_RS24620 () | 554..1411 | + | 858 | WP_000130940.1 | incFII family plasmid replication initiator RepA | - |
| BWI83_RS24640 () | 2326..2565 | + | 240 | WP_094320496.1 | hypothetical protein | - |
| BWI83_RS24645 () | 2713..4218 | - | 1506 | Protein_4 | Methyl-accepting chemotaxis protein McpQ | VF |
| BWI83_RS24650 () | 4235..4931 | - | 697 | Protein_5 | IS1 family transposase | - |
| BWI83_RS24655 () | 5123..5767 | - | 645 | Protein_6 | STAS domain-containing protein | - |
| BWI83_RS26805 () | 5844..6194 | - | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| BWI83_RS24665 () | 6397..7410 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| BWI83_RS24670 () | 7567..8040 | + | 474 | WP_000777555.1 | Dihydrofolate reductase type 1 | ARG |
| BWI83_RS24675 () | 8113..8904 | + | 792 | WP_001206317.1 | Streptomycin 3''-adenylyltransferase | ARG |
| BWI83_RS24680 () | 9066..9413 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| BWI83_RS24685 () | 9407..10246 | + | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| BWI83_RS24695 () | 10374..10577 | + | 204 | WP_000376616.1 | hypothetical protein | - |
| BWI83_RS24700 () | 10733..11938 | + | 1206 | WP_000184001.1 | chromate efflux transporter | - |
| BWI83_RS24705 () | 11948..12253 | + | 306 | WP_000130000.1 | hypothetical protein | Relaxase |
| BWI83_RS26955 () | 12297..12362 | + | 66 | Protein_16 | EAL domain-containing protein | - |
| BWI83_RS24715 () | 12480..13244 | + | 765 | WP_001389365.1 | IS6-like element IS6100 family transposase | - |
| BWI83_RS24730 () | 13737..14321 | - | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
| BWI83_RS24735 () | 14321..15559 | - | 1239 | WP_000004159.1 | MFS transporter | - |
| BWI83_RS24740 () | 15556..16461 | - | 906 | WP_000219391.1 | hypothetical protein | ARG |
| BWI83_RS24750 () | 16583..17287 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| BWI83_RS24755 () | 17434..18563 | + | 1130 | WP_085959879.1 | IS3 family transposase IS1133 | Transposase |
| BWI83_RS24760 () | 18670..19473 | + | 804 | WP_024261901.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| BWI83_RS24765 () | 19473..20309 | + | 837 | WP_045893453.1 | hypothetical protein | ARG |
| BWI83_RS24775 () | 20417..20698 | - | 282 | Protein_25 | CcgAII protein | - |
| BWI83_RS24780 () | 20753..20932 | - | 180 | WP_000214483.1 | hypothetical protein | - |
| BWI83_RS24785 () | 21158..22018 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| BWI83_RS24790 () | 22201..22758 | - | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| BWI83_RS26810 () | 22922..23062 | + | 141 | WP_020219413.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| BWI83_RS24800 () | 23074..23778 | + | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| BWI83_RS24810 () | 23880..24359 | + | 480 | WP_000888203.1 | Rrf2 family transcriptional regulator | - |
| BWI83_RS24815 () | 24429..27581 | - | 3153 | WP_000347934.1 | Efflux pump membrane transporter BepE | VF |
| BWI83_RS24820 () | 27605..28780 | - | 1176 | WP_002914189.1 | Efflux pump periplasmic linker BepF | VF |
| BWI83_RS24825 () | 29100..29804 | + | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| BWI83_RS24830 () | 30139..30531 | + | 393 | WP_000084745.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| BWI83_RS24835 () | 30851..31237 | - | 387 | WP_063102497.1 | bleomycin binding protein | - |
| BWI83_RS24845 () | 31431..32135 | - | 705 | WP_113368077.1 | IS6-like element IS26 family transposase | - |
| BWI83_RS24850 () | 32203..33501 | + | 1299 | Protein_38 | Tn3 family transposase TnpA_Tn3 | Transposase |
| BWI83_RS24855 () | 33535..34251 | + | 717 | Protein_39 | Tn3 family transposase | - |
| BWI83_RS24860 () | 34309..34551 | + | 243 | WP_000844627.1 | transposase | - |
| BWI83_RS24865 () | 34583..35233 | - | 651 | WP_158666876.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| BWI83_RS24870 () | 35339..36538 | + | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| BWI83_RS24875 () | 36570..37454 | - | 885 | WP_000058717.1 | EamA family transporter | - |
| BWI83_RS24880 () | 37592..37999 | - | 408 | WP_001214976.1 | cysteine hydrolase | - |
| BWI83_RS24885 () | 37988..39739 | + | 1752 | Protein_45 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| BWI83_RS24890 () | 39772..39849 | + | 78 | Protein_46 | toxin-antitoxin system protein | - |
| BWI83_RS24895 () | 39846..40127 | + | 282 | WP_000969990.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| BWI83_RS24900 () | 40173..41021 | + | 849 | WP_023154360.1 | 3'-5' exonuclease | - |
| BWI83_RS24905 () | 41138..41620 | + | 483 | WP_001311056.1 | hypothetical protein | - |
| BWI83_RS24915 () | 41922..42269 | + | 348 | WP_000142450.1 | hypothetical protein | - |
| BWI83_RS26960 () | 42287..42448 | - | 162 | WP_000251882.1 | hypothetical protein | - |
| BWI83_RS24920 () | 42692..46513 | + | 3822 | WP_064055658.1 | hypothetical protein | - |
| BWI83_RS24925 () | 47045..47395 | + | 351 | WP_000493379.1 | hypothetical protein | - |
| BWI83_RS24930 () | 47439..48128 | + | 690 | WP_000796228.1 | hypothetical protein | - |
| BWI83_RS24935 () | 48125..48916 | + | 792 | WP_000016493.1 | site-specific integrase | - |
| BWI83_RS24940 () | 49094..49447 | + | 354 | WP_000864812.1 | colicin M immunity protein | - |
| BWI83_RS24945 () | 49497..50312 | - | 816 | WP_001312845.1 | lipid II-degrading bacteriocin colicin M | - |
| BWI83_RS24955 () | 50556..51083 | + | 528 | WP_000203272.1 | colicin B immunity protein | - |
| BWI83_RS24960 () | 51101..51268 | - | 168 | Protein_59 | colicin-B | - |
| BWI83_RS24965 () | 51441..51722 | + | 282 | WP_001105066.1 | hypothetical protein | - |
| BWI83_RS26815 () | 52186..52422 | + | 237 | WP_014640552.1 | colicin V immunity protein | - |
| BWI83_RS24975 () | 52400..52603 | + | 204 | WP_001259759.1 | colicin V family bacteriocin | - |
| BWI83_RS24980 () | 52614..53311 | - | 698 | Protein_63 | IS1 family transposase | - |
| BWI83_RS24990 () | 53546..55723 | + | 2178 | WP_001222186.1 | Ferric enterobactin receptor | VF |
| BWI83_RS24995 () | 55768..56724 | - | 957 | WP_064055648.1 | Ferri-bacillibactin esterase BesA | VF |
| BWI83_RS25000 () | 56809..58038 | - | 1230 | WP_000933675.1 | Enterochelin esterase | VF |
| BWI83_RS25005 () | 58142..61801 | - | 3660 | WP_001111199.1 | Multidrug efflux ATP-binding/permease protein | VF |
| BWI83_RS25010 () | 61941..63056 | - | 1116 | WP_001318220.1 | Elloramycin glycosyltransferase ElmGT | VF |
| BWI83_RS25020 () | 64292..65393 | - | 1102 | Protein_69 | IS481 family transposase ISKpn28 | Transposase |
| BWI83_RS25030 () | 65947..66146 | + | 200 | Protein_70 | lysis system i-spanin subunit Rz | - |
| BWI83_RS25035 () | 66204..66497 | - | 294 | WP_000738422.1 | increased serum survival lipoprotein Iss | - |
| BWI83_RS25045 () | 67124..68360 | + | 1237 | Protein_72 | IS3 family transposase IS2 | Transposase |
| BWI83_RS25055 () | 69583..70776 | + | 1194 | WP_000450494.1 | GTP-binding protein | - |
| BWI83_RS25060 () | 70954..71103 | + | 150 | Protein_74 | IS3 family transposase IS2 | Transposase |
| BWI83_RS25065 () | 71413..72802 | + | 1390 | Protein_75 | ISNCY family transposase ISKpn21 | Transposase |
| BWI83_RS25070 () | 72880..73577 | - | 698 | Protein_76 | IS1 family transposase | - |
| BWI83_RS25080 () | 73634..73902 | + | 269 | Protein_77 | IS3 family transposase ISLad1 | Transposase |
| BWI83_RS25090 () | 75447..75605 | + | 159 | WP_001312823.1 | integrase core domain-containing protein | - |
| BWI83_RS25105 () | 76878..77831 | + | 954 | WP_000280980.1 | Protease 7 | VF |
| BWI83_RS25115 () | 78264..79373 | + | 1110 | WP_000771475.1 | SDR family oxidoreductase | - |
| BWI83_RS25120 () | 79442..80344 | + | 903 | WP_001312822.1 | hypothetical protein | VF |
| BWI83_RS25125 () | 80718..80906 | + | 189 | WP_014640565.1 | hypothetical protein | - |
| BWI83_RS25130 () | 81027..81767 | + | 741 | WP_001066954.1 | tyrosine-type recombinase/integrase | - |
| BWI83_RS25135 () | 82052..83029 | - | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| BWI83_RS25140 () | 83574..84479 | - | 906 | Protein_86 | IS3 family transposase ISCfr6 | Transposase |
| BWI83_RS25145 () | 84545..85696 | + | 1152 | WP_032255490.1 | IS30 family transposase IS30D | Transposase |
| BWI83_RS25150 () | 85709..86011 | - | 303 | Protein_88 | IS3 family transposase ISEc31 | Transposase |
| BWI83_RS25155 () | 86260..86583 | + | 324 | Protein_89 | IS21 family transposase IS21 | Transposase |
| BWI83_RS26965 () | 86585..86689 | + | 105 | Protein_90 | AAA family ATPase | - |
| BWI83_RS25165 () | 86750..87263 | + | 514 | Protein_91 | DUF4113 domain-containing protein | - |
| BWI83_RS25170 () | 87443..88140 | - | 698 | Protein_92 | IS1 family transposase | - |
| BWI83_RS25185 () | 88496..89410 | + | 915 | WP_000949004.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
| BWI83_RS25190 () | 89410..90237 | + | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
| BWI83_RS25195 () | 90234..91091 | + | 858 | WP_000992806.1 | Manganese transport system membrane protein MntB | ARG |
| BWI83_RS25200 () | 91088..91945 | + | 858 | WP_000968140.1 | Manganese transport system membrane protein MntB | ARG |
| BWI83_RS25205 () | 92179..92436 | - | 258 | Protein_97 | Tn3 family transposase | - |
| BWI83_RS25210 () | 92434..92565 | + | 132 | Protein_98 | phosphopyruvate hydratase | - |
| BWI83_RS25215 () | 92562..92789 | - | 228 | Protein_99 | malate dehydrogenase | - |
| BWI83_RS25225 () | 93229..93708 | - | 480 | WP_000190053.1 | hypothetical protein | - |
| BWI83_RS25230 () | 93826..94275 | + | 450 | WP_000238252.1 | hypothetical protein | - |
| BWI83_RS25235 () | 94884..96386 | + | 1503 | WP_148115999.1 | hypothetical protein | - |
| BWI83_RS25245 () | 96542..97239 | + | 698 | Protein_103 | IS1 family transposase | - |
| BWI83_RS25250 () | 97539..98705 | + | 1167 | WP_001238646.1 | Sporulation initiation inhibitor protein Soj | VF |
| BWI83_RS25255 () | 98705..99676 | + | 972 | WP_000817028.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| BWI83_RS26970 () | 100488..100826 | + | 339 | WP_001513511.1 | hypothetical protein | - |
| BWI83_RS25265 () | 100895..101227 | + | 333 | Protein_107 | hypothetical protein | - |
| BWI83_RS25275 () | 101281..101978 | + | 698 | Protein_108 | IS1 family transposase | - |
| BWI83_RS25280 () | 102031..103002 | - | 972 | WP_000082154.1 | IS110 family transposase ISEc32 | Transposase |
| BWI83_RS25290 () | 103527..103829 | + | 303 | WP_072256028.1 | antirestriction protein | - |
| BWI83_RS25295 () | 103829..104290 | + | 462 | WP_042007484.1 | DUF1380 family protein | - |
| BWI83_RS25300 () | 104290..104472 | + | 183 | WP_001027505.1 | hypothetical protein | - |
| BWI83_RS26975 () | 104460..104788 | - | 329 | Protein_113 | pilus assembly protein | - |
| BWI83_RS25320 () | 105466..105696 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| BWI83_RS25325 () | 105748..107109 | + | 1362 | WP_000170681.1 | DUF3560 domain-containing protein | - |
| BWI83_RS25330 () | 107155..107718 | + | 564 | WP_001311069.1 | class I SAM-dependent methyltransferase | - |
| BWI83_RS25340 () | 107870..108142 | + | 273 | WP_072133095.1 | hypothetical protein | - |
| BWI83_RS25360 () | 108615..109142 | + | 528 | WP_000290793.1 | single-stranded DNA-binding protein | - |
| BWI83_RS25365 () | 109198..109431 | + | 234 | WP_000006004.1 | DUF905 domain-containing protein | - |
| BWI83_RS25370 () | 109490..111448 | + | 1959 | WP_001145469.1 | ParB/RepB/Spo0J family partition protein | - |
| BWI83_RS25375 () | 111503..111937 | + | 435 | WP_000845895.1 | conjugation system SOS inhibitor PsiB | - |
| BWI83_RS25380 () | 111934..112653 | + | 720 | WP_001276228.1 | plasmid SOS inhibition protein A | - |
| BWI83_RS26830 () | 112665..112853 | - | 189 | WP_001299721.1 | hypothetical protein | - |
| - () | 112665..112889 | + | 225 | NuclAT_0 | - | - |
| - () | 112665..112889 | + | 225 | NuclAT_0 | - | - |
| - () | 112665..112889 | + | 225 | NuclAT_0 | - | - |
| - () | 112665..112889 | + | 225 | NuclAT_0 | - | - |
| - () | 112822..112887 | + | 66 | - | - | Antitoxin Detail |
| BWI83_RS25385 () | 112933..113091 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| BWI83_RS26980 () | 113782..113988 | + | 207 | WP_000547939.1 | hypothetical protein | - |
| BWI83_RS25405 () | 114013..114300 | + | 288 | WP_000107535.1 | hypothetical protein | - |
| BWI83_RS25410 () | 114423..115244 | + | 822 | WP_001234469.1 | DUF945 domain-containing protein | - |
| BWI83_RS25415 () | 115541..116188 | - | 648 | WP_000614936.1 | hypothetical protein | VF |
| BWI83_RS25420 () | 116465..116848 | + | 384 | WP_000124981.1 | relaxosome protein TraM | - |
| BWI83_RS25425 () | 117039..117725 | + | 687 | WP_000332484.1 | PAS domain-containing protein | - |
| BWI83_RS25430 () | 117819..118046 | + | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| BWI83_RS25435 () | 118080..118439 | + | 360 | WP_000340272.1 | type IV conjugative transfer system pilin TraA | - |
| BWI83_RS25440 () | 118454..118765 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| BWI83_RS25445 () | 118787..119353 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| BWI83_RS25450 () | 119364..120068 | + | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| BWI83_RS25455 () | 120068..121495 | + | 1428 | WP_000146685.1 | conjugal transfer protein TraB | - |
| BWI83_RS25460 () | 121485..122057 | + | 573 | WP_000002780.1 | conjugal transfer protein TraP | - |
| BWI83_RS25465 () | 122054..122371 | + | 318 | WP_001057292.1 | conjugal transfer protein TrbD | - |
| BWI83_RS25470 () | 122368..122619 | + | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| BWI83_RS25475 () | 122616..123131 | + | 516 | WP_000809906.1 | type IV conjugative transfer system lipoprotein TraV | - |
| BWI83_RS25480 () | 123266..123487 | + | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| BWI83_RS25485 () | 123647..126274 | + | 2628 | WP_001064268.1 | type IV secretion system protein TraC | - |
| BWI83_RS25490 () | 126271..126657 | + | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| BWI83_RS25495 () | 126654..127286 | + | 633 | WP_001203745.1 | type-F conjugative transfer system protein TraW | - |
| BWI83_RS25500 () | 127283..128275 | + | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| BWI83_RS25505 () | 128301..128762 | + | 462 | WP_000277845.1 | hypothetical protein | - |
| BWI83_RS25510 () | 128792..129244 | + | 453 | WP_000069427.1 | hypothetical protein | - |
| BWI83_RS25515 () | 129272..129910 | + | 639 | WP_001104248.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| BWI83_RS25520 () | 129907..131715 | + | 1809 | WP_000821821.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| BWI83_RS25525 () | 131742..131999 | + | 258 | WP_000864325.1 | conjugal transfer protein TrbE | - |
| BWI83_RS25530 () | 131992..132735 | + | 744 | WP_001030378.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| BWI83_RS25535 () | 132751..133098 | + | 348 | WP_001287893.1 | conjugal transfer protein TrbA | - |
| BWI83_RS25540 () | 133217..133501 | + | 285 | WP_000624110.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| BWI83_RS25545 () | 133488..134033 | + | 546 | WP_000052618.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| BWI83_RS25550 () | 133963..134325 | + | 363 | WP_001443292.1 | P-type conjugative transfer protein TrbJ | - |
| BWI83_RS25555 () | 134325..135698 | + | 1374 | WP_001137358.1 | conjugal transfer protein TraH | - |
| BWI83_RS25560 () | 135695..138517 | + | 2823 | WP_001007026.1 | conjugal transfer mating pair stabilization protein TraG | - |
| BWI83_RS25565 () | 138532..139035 | + | 504 | WP_000605510.1 | hypothetical protein | - |
| BWI83_RS25570 () | 139067..139798 | + | 732 | WP_000850422.1 | complement resistance protein TraT | - |
| BWI83_RS25575 () | 140051..142240 | + | 2190 | WP_106667887.1 | type IV conjugative transfer system coupling protein TraD | - |
| BWI83_RS25580 () | 142240..147510 | + | 5271 | WP_148116000.1 | Multifunctional conjugation protein TraI | Relaxase |
| BWI83_RS25585 () | 147530..148276 | + | 747 | WP_000205777.1 | conjugal transfer pilus acetylase TraX | - |
| BWI83_RS25590 () | 148331..148891 | + | 561 | WP_000139359.1 | fertility inhibition protein FinO | - |
| BWI83_RS25595 () | 149029..149241 | + | 213 | WP_012311405.1 | hypothetical protein | - |
| BWI83_RS25600 () | 149484..149945 | + | 462 | WP_001233871.1 | thermonuclease family protein | - |
| BWI83_RS25605 () | 149991..150200 | + | 210 | WP_001333231.1 | hemolysin expression modulator Hha | - |
| BWI83_RS25610 () | 150238..150811 | + | 574 | Protein_167 | DUF2726 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|