MGE detailed information
MGE type: Genomic_island MGE length: 18696 bp
Accession: NZ_CP018239 Location: 5402551..5421246 Organism: Escherichia coli strain 272 Replicon: chromosome
Accession: NZ_CP018239 Location: 5402551..5421246 Organism: Escherichia coli strain 272 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BFL22_RS29510 () | 5397696..5398874 | - | 1179 | WP_001089435.1 | MFS transporter | - |
| BFL22_RS29515 () | 5398942..5399784 | - | 843 | WP_000746206.1 | YjiK family protein | - |
| BFL22_RS29520 () | 5400050..5402239 | - | 2190 | WP_000535067.1 | T3SS effector pentapeptide repeat protein EspX6 | - |
| BFL22_RS29525 () | 5402551..5402817 | - | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| BFL22_RS29530 () | 5402814..5403581 | - | 768 | WP_000222489.1 | hypothetical protein | - |
| BFL22_RS29535 () | 5403591..5404742 | - | 1152 | WP_001301805.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| BFL22_RS29540 () | 5404858..5406129 | - | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| BFL22_RS29545 () | 5406170..5407402 | - | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| BFL22_RS29550 () | 5407869..5408801 | + | 933 | WP_000181144.1 | Recombination-promoting nuclease RpnD | VF |
| BFL22_RS29555 () | 5409044..5410456 | - | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| BFL22_RS29565 () | 5410633..5410797 | + | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| BFL22_RS29570 () | 5410894..5411775 | + | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| BFL22_RS29575 () | 5411823..5412986 | + | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| BFL22_RS29580 () | 5413033..5413374 | - | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| - () | 5413369..5413445 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 5413369..5413445 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 5413369..5413445 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 5413369..5413445 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 5413369..5413445 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 5413369..5413445 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 5413369..5413445 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 5413369..5413445 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| BFL22_RS29585 () | 5413595..5415349 | - | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| BFL22_RS29590 () | 5415349..5416818 | - | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| BFL22_RS29595 () | 5416885..5419317 | - | 2433 | WP_000819029.1 | DEAD/DEAH box helicase family protein | - |
| BFL22_RS29600 () | 5419595..5419879 | + | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| BFL22_RS29605 () | 5419888..5421246 | + | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| BFL22_RS29610 () | 5421315..5422271 | - | 957 | WP_001297640.1 | GTPase | - |
| BFL22_RS29615 () | 5422282..5422485 | - | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| BFL22_RS29620 () | 5422535..5424685 | - | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| BFL22_RS29625 () | 5424978..5425520 | - | 543 | WP_000934391.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0 |