MGE detailed information
MGE type: Integron MGE length: 15640 bp
Accession: NZ_CP017689 Location: 3813664..3829303 Organism: Thalassotalea crassostreae strain LPB0090 Replicon: chromosome
Accession: NZ_CP017689 Location: 3813664..3829303 Organism: Thalassotalea crassostreae strain LPB0090 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LT090_RS16465 () | 3808800..3809207 | - | 408 | WP_068547711.1 | GFA family protein | - |
| LT090_RS16470 () | 3809409..3810059 | + | 651 | WP_068547710.1 | histidine kinase | - |
| LT090_RS16475 () | 3810078..3810527 | - | 450 | WP_068547709.1 | nuclear transport factor 2 family protein | - |
| LT090_RS16480 () | 3810551..3811198 | - | 648 | WP_068547708.1 | DUF4386 family protein | - |
| LT090_RS16485 () | 3811318..3811563 | - | 246 | WP_068547707.1 | Rho-binding antiterminator | - |
| LT090_RS16490 () | 3811627..3811980 | - | 354 | WP_068547706.1 | DUF2200 domain-containing protein | - |
| LT090_RS16495 () | 3812029..3812439 | - | 411 | WP_068547705.1 | hypothetical protein | - |
| LT090_RS16500 () | 3812492..3812680 | - | 189 | WP_068547704.1 | hypothetical protein | - |
| LT090_RS16505 () | 3812838..3813119 | - | 282 | WP_068547703.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| LT090_RS16510 () | 3813306..3813650 | - | 345 | WP_068547702.1 | hypothetical protein | - |
| LT090_RS16515 () | 3813758..3814051 | - | 294 | WP_068547701.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| LT090_RS16520 () | 3814051..3814329 | - | 279 | WP_068547700.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LT090_RS16525 () | 3814542..3815585 | + | 1044 | WP_068547699.1 | IS110 family transposase ISShwo5 | Transposase |
| LT090_RS17040 () | 3815829..3815972 | + | 144 | WP_157726661.1 | hypothetical protein | - |
| LT090_RS16530 () | 3816047..3816493 | - | 447 | WP_157726666.1 | hypothetical protein | - |
| LT090_RS16535 () | 3816590..3817219 | - | 630 | WP_068547896.1 | PEP-CTERM sorting domain-containing protein | - |
| LT090_RS16540 () | 3817513..3817758 | - | 246 | WP_068547895.1 | hypothetical protein | - |
| LT090_RS16545 () | 3817882..3818178 | - | 297 | WP_068547894.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| LT090_RS16550 () | 3818178..3818456 | - | 279 | WP_068547893.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LT090_RS16555 () | 3818624..3819337 | - | 714 | WP_068547892.1 | subclass B1 metallo-beta-lactamase | - |
| LT090_RS16560 () | 3819454..3819768 | - | 315 | WP_068547891.1 | excalibur calcium-binding domain-containing protein | - |
| LT090_RS16565 () | 3819887..3820150 | - | 264 | WP_157726665.1 | hypothetical protein | - |
| LT090_RS16570 () | 3820234..3821166 | - | 933 | WP_068547889.1 | hypothetical protein | - |
| LT090_RS16575 () | 3821511..3821732 | - | 222 | WP_068547888.1 | hypothetical protein | - |
| LT090_RS16580 () | 3821923..3822966 | + | 1044 | WP_068547699.1 | IS110 family transposase ISShwo5 | Transposase |
| LT090_RS17045 () | 3823210..3823353 | + | 144 | WP_157726661.1 | hypothetical protein | - |
| LT090_RS16590 () | 3824232..3825275 | + | 1044 | WP_068547699.1 | IS110 family transposase ISShwo5 | Transposase |
| LT090_RS17050 () | 3825519..3825662 | + | 144 | WP_157726661.1 | hypothetical protein | - |
| LT090_RS16595 () | 3825739..3826404 | - | 666 | WP_068547072.1 | hypothetical protein | - |
| LT090_RS16600 () | 3826584..3826838 | - | 255 | WP_068547071.1 | hypothetical protein | - |
| LT090_RS16605 () | 3826956..3827210 | - | 255 | WP_068547070.1 | hypothetical protein | - |
| LT090_RS16610 () | 3827722..3828282 | - | 561 | WP_068547069.1 | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase | VF |
| LT090_RS16615 () | 3828338..3829303 | + | 966 | WP_068547068.1 | IS91 family transposase ISAzo26 | Transposase |
| LT090_RS16620 () | 3829355..3830572 | - | 1218 | WP_068547067.1 | outer membrane protein transport protein | - |
| LT090_RS16625 () | 3830976..3832556 | + | 1581 | WP_162272309.1 | arylsulfatase | - |
| LT090_RS16630 () | 3832666..3833235 | - | 570 | WP_070796027.1 | cytochrome b/b6 domain-containing protein | - |
| LT090_RS16635 () | 3833239..3833661 | - | 423 | WP_068547064.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|