MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 53896 bp
Accession: NZ_CP017631 Location: 804238..858133 Organism: Escherichia coli strain SLK172 Replicon: chromosome
Accession: NZ_CP017631 Location: 804238..858133 Organism: Escherichia coli strain SLK172 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BJJ90_RS04225 () | 799405..799860 | + | 456 | WP_001087289.1 | type II secretion system major pseudopilin GspG | - |
| BJJ90_RS04230 () | 799864..800427 | + | 564 | WP_001115154.1 | type II secretion system minor pseudopilin GspH | - |
| BJJ90_RS04235 () | 800424..800795 | + | 372 | WP_000820113.1 | type II secretion system minor pseudopilin GspI | - |
| BJJ90_RS04240 () | 800792..801397 | + | 606 | WP_024168650.1 | type II secretion system minor pseudopilin GspJ | - |
| BJJ90_RS04245 () | 801394..802371 | + | 978 | WP_001460058.1 | type II secretion system minor pseudopilin GspK | - |
| BJJ90_RS04250 () | 802368..803546 | + | 1179 | WP_000094962.1 | type II secretion system protein GspL | - |
| BJJ90_RS04255 () | 803548..804084 | + | 537 | WP_000942783.1 | GspM family type II secretion system protein YghD | - |
| BJJ90_RS04260 () | 804453..805013 | - | 561 | Protein_759 | DUF4942 domain-containing protein | - |
| BJJ90_RS32555 () | 805158..805295 | - | 138 | WP_096006700.1 | DUF957 domain-containing protein | - |
| BJJ90_RS32560 () | 805350..805520 | - | 171 | Protein_761 | hypothetical protein | - |
| BJJ90_RS04270 () | 805483..805893 | - | 411 | WP_039023580.1 | TA system toxin CbtA family protein | Toxin Detail |
| BJJ90_RS04275 () | 805984..806352 | - | 369 | WP_039023579.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| BJJ90_RS31790 () | 806402..806676 | - | 275 | Protein_764 | antitoxin of the YeeV-YeeU toxin-antitoxin system | - |
| BJJ90_RS33220 () | 806774..807034 | - | 261 | WP_032303908.1 | hypothetical protein | - |
| BJJ90_RS04285 () | 807049..807270 | - | 222 | WP_000692315.1 | DUF987 domain-containing protein | - |
| BJJ90_RS04290 () | 807333..807809 | - | 477 | WP_001186771.1 | RadC family protein | - |
| BJJ90_RS04295 () | 807825..808304 | - | 480 | WP_001696591.1 | antirestriction protein | - |
| BJJ90_RS04305 () | 808570..809388 | - | 819 | WP_001175153.1 | DUF945 domain-containing protein | - |
| BJJ90_RS04310 () | 809478..809711 | - | 234 | WP_001278287.1 | DUF905 family protein | - |
| BJJ90_RS04315 () | 809717..810394 | - | 678 | WP_001097301.1 | hypothetical protein | - |
| BJJ90_RS04320 () | 810542..811222 | - | 681 | WP_073313349.1 | WYL domain-containing protein | - |
| BJJ90_RS04330 () | 811425..812309 | - | 885 | WP_075362536.1 | 50S ribosome-binding GTPase | - |
| BJJ90_RS04340 () | 812494..813624 | + | 1131 | WP_073313469.1 | hypothetical protein | - |
| BJJ90_RS04350 () | 815130..815861 | + | 732 | WP_073313472.1 | inovirus Gp2 family protein | - |
| BJJ90_RS04355 () | 816189..817067 | + | 879 | WP_047656606.1 | restriction endonuclease | - |
| BJJ90_RS04360 () | 817121..817674 | + | 554 | Protein_777 | transposase | - |
| BJJ90_RS31795 () | 817833..818612 | - | 780 | Protein_778 | IS3 family transposase IS2 | Transposase |
| BJJ90_RS04375 () | 818775..819746 | - | 972 | WP_170386723.1 | IS30 family transposase ISApl1 | Transposase |
| BJJ90_RS04380 () | 819891..820331 | + | 441 | WP_000038139.1 | H-NS histone family protein | - |
| BJJ90_RS04385 () | 820600..820728 | + | 129 | Protein_781 | IS256 family transposase | - |
| BJJ90_RS04390 () | 820758..821107 | - | 350 | Protein_782 | IS21 family transposase IS21 | Transposase |
| BJJ90_RS04395 () | 822321..822887 | + | 567 | WP_001126822.1 | inovirus-type Gp2 protein | - |
| BJJ90_RS04400 () | 823134..823706 | + | 573 | WP_039023561.1 | hypothetical protein | - |
| BJJ90_RS04405 () | 823775..824023 | + | 249 | WP_039023560.1 | AlpA family transcriptional regulator | - |
| BJJ90_RS04410 () | 824274..824912 | - | 639 | WP_000684812.1 | RpiB/LacA/LacB family sugar-phosphate isomerase | - |
| BJJ90_RS04415 () | 825185..826339 | + | 1155 | WP_032297239.1 | oligogalacturonate lyase | - |
| BJJ90_RS04420 () | 826369..827169 | + | 801 | WP_000345753.1 | 5-keto-D-gluconate 5-reductase | VF |
| BJJ90_RS04425 () | 827224..827547 | + | 324 | WP_001696527.1 | cupin domain-containing protein | - |
| BJJ90_RS04440 () | 829219..829593 | + | 375 | Protein_791 | DDE-type integrase/transposase/recombinase | - |
| BJJ90_RS04445 () | 830105..830893 | + | 789 | WP_001696174.1 | DeoR family transcriptional regulator | - |
| BJJ90_RS04450 () | 831011..831484 | + | 474 | WP_001696173.1 | PTS sugar transporter subunit IIB | - |
| BJJ90_RS04455 () | 831503..832273 | + | 771 | WP_001696172.1 | PTS sugar transporter subunit IIC | - |
| BJJ90_RS04460 () | 832263..833129 | + | 867 | WP_001767853.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| BJJ90_RS04465 () | 833139..833576 | + | 438 | WP_001696170.1 | PTS sugar transporter subunit IIA | - |
| BJJ90_RS04470 () | 833657..834691 | + | 1035 | WP_001696169.1 | glycoside hydrolase family 88 protein | - |
| BJJ90_RS04475 () | 834725..836182 | + | 1458 | WP_077250607.1 | DUF2264 domain-containing protein | - |
| BJJ90_RS04480 () | 836227..837231 | + | 1005 | WP_001767848.1 | hypothetical protein | - |
| BJJ90_RS04485 () | 837292..839649 | + | 2358 | WP_001696167.1 | Hyaluronate lyase | VF |
| BJJ90_RS04490 () | 839659..842346 | + | 2688 | WP_001696166.1 | autotransporter domain-containing protein | - |
| BJJ90_RS33595 () | 842382..842525 | + | 144 | WP_001767846.1 | hypothetical protein | - |
| BJJ90_RS04500 () | 842693..842905 | - | 213 | Protein_803 | transposase | - |
| BJJ90_RS04515 () | 844202..844816 | + | 615 | Protein_805 | putative HTH-type transcriptional regulator YahB | VF |
| BJJ90_RS31810 () | 845363..846205 | - | 843 | Protein_806 | transposase | - |
| BJJ90_RS04540 () | 846848..848827 | + | 1980 | WP_029400569.1 | PhoX family phosphatase | - |
| BJJ90_RS33230 () | 848877..849071 | + | 195 | WP_126870310.1 | hypothetical protein | - |
| BJJ90_RS32575 () | 849119..849298 | + | 180 | WP_001313264.1 | hypothetical protein | - |
| BJJ90_RS04550 () | 850154..850894 | + | 741 | WP_000755103.1 | porin family protein | - |
| BJJ90_RS04555 () | 851076..852575 | + | 1500 | WP_001313263.1 | phosphoethanolamine transferase | - |
| BJJ90_RS04560 () | 852684..856199 | - | 3516 | WP_021572001.1 | ATP-binding protein | - |
| BJJ90_RS04570 () | 856651..857913 | - | 1263 | WP_001218753.1 | Prophage integrase IntS ; Integrase | Integrase |
| BJJ90_RS04580 () | 858292..858999 | - | 708 | WP_000234514.1 | DUF554 domain-containing protein | - |
| BJJ90_RS33805 () | 859152..859235 | + | 84 | WP_211180506.1 | protein YqgH | - |
| BJJ90_RS04590 () | 859397..861532 | + | 2136 | WP_000839760.1 | ornithine decarboxylase | - |
| BJJ90_RS04595 () | 861582..862838 | - | 1257 | WP_001299430.1 | nucleoside permease NupG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|