MGE detailed information
MGE type: Genomic_island MGE length: 57186 bp
Accession: NZ_CP017290 Location: 2005670..2062855 Organism: Pseudomonas sp. LPH1 Replicon: chromosome
Accession: NZ_CP017290 Location: 2005670..2062855 Organism: Pseudomonas sp. LPH1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BHQ29_RS09175 () | 2001026..2003404 | + | 2379 | WP_079783526.1 | phenylalanine--tRNA ligase subunit beta | - |
| BHQ29_RS09180 () | 2003408..2003710 | + | 303 | WP_003243414.1 | integration host factor subunit alpha | - |
| BHQ29_RS09185 () | 2003691..2004047 | + | 357 | WP_013716019.1 | MerR family transcriptional regulator | - |
| BHQ29_RS24205 () | 2004855..2005520 | - | 666 | WP_152029958.1 | hypothetical protein | - |
| BHQ29_RS24210 () | 2006498..2006899 | + | 402 | WP_152029959.1 | hypothetical protein | - |
| BHQ29_RS09210 () | 2006997..2007221 | + | 225 | WP_079783530.1 | AlpA family transcriptional regulator | - |
| BHQ29_RS09215 () | 2007608..2008306 | + | 699 | WP_079783531.1 | inovirus Gp2 family protein | - |
| BHQ29_RS09220 () | 2008349..2008651 | - | 303 | Protein_1827 | transposase | - |
| BHQ29_RS09225 () | 2008927..2009271 | - | 345 | WP_079783532.1 | hypothetical protein | - |
| BHQ29_RS24215 () | 2009373..2009957 | - | 585 | WP_152029960.1 | hypothetical protein | - |
| BHQ29_RS09235 () | 2010100..2010447 | + | 348 | WP_079783534.1 | helix-turn-helix domain-containing protein | - |
| BHQ29_RS09245 () | 2010819..2011004 | - | 186 | WP_079783536.1 | hypothetical protein | - |
| BHQ29_RS09250 () | 2011018..2011515 | - | 498 | WP_079783537.1 | DNA repair protein RadC | - |
| BHQ29_RS09255 () | 2011487..2012437 | - | 951 | WP_079783538.1 | hydrolase or metal-binding protein | - |
| BHQ29_RS09260 () | 2012524..2013528 | - | 1005 | WP_079783539.1 | YqaJ viral recombinase family protein | - |
| BHQ29_RS09265 () | 2013616..2014584 | - | 969 | WP_079783540.1 | DUF932 domain-containing protein | - |
| BHQ29_RS09275 () | 2015131..2015961 | - | 831 | WP_152029961.1 | hypothetical protein | - |
| BHQ29_RS09280 () | 2016160..2016891 | - | 732 | WP_177345356.1 | WYL domain-containing protein | - |
| BHQ29_RS09285 () | 2017236..2018114 | + | 879 | WP_079783544.1 | sel1 repeat family protein | - |
| BHQ29_RS24425 () | 2018189..2019556 | + | 1368 | WP_177345318.1 | hypothetical protein | - |
| BHQ29_RS09295 () | 2019643..2021784 | + | 2142 | WP_079783545.1 | hypothetical protein | - |
| BHQ29_RS09300 () | 2021921..2022166 | + | 246 | WP_079783546.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin Detail |
| BHQ29_RS24430 () | 2022176..2022415 | + | 240 | WP_152030010.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| BHQ29_RS09310 () | 2022822..2023403 | - | 582 | WP_079783547.1 | plasmid pRiA4b ORF-3 family protein | - |
| BHQ29_RS09315 () | 2023417..2024292 | - | 876 | WP_079783548.1 | WYL domain-containing protein | - |
| BHQ29_RS09320 () | 2024428..2026002 | + | 1575 | WP_079785292.1 | DNA recombination protein RmuC | - |
| BHQ29_RS09325 () | 2026026..2026673 | + | 648 | WP_079783549.1 | peptidase M15 | - |
| BHQ29_RS09330 () | 2026857..2027702 | + | 846 | WP_079783550.1 | hypothetical protein | - |
| BHQ29_RS09335 () | 2028131..2028448 | + | 318 | WP_079783551.1 | hypothetical protein | - |
| BHQ29_RS09340 () | 2028643..2029422 | + | 780 | WP_079783552.1 | hypothetical protein | - |
| BHQ29_RS09345 () | 2029415..2029960 | + | 546 | WP_079783553.1 | DUF1788 domain-containing protein | - |
| BHQ29_RS09350 () | 2029984..2033448 | + | 3465 | WP_079783554.1 | BREX system P-loop protein BrxC | - |
| BHQ29_RS09355 () | 2033611..2036922 | + | 3312 | WP_079783555.1 | restriction endonuclease subunit M | - |
| BHQ29_RS09360 () | 2036980..2037492 | + | 513 | WP_079783556.1 | SMI1/KNR4 family protein | - |
| BHQ29_RS09365 () | 2037501..2039168 | + | 1668 | WP_079783557.1 | hypothetical protein | - |
| BHQ29_RS09370 () | 2039173..2040042 | + | 870 | WP_079783558.1 | hypothetical protein | - |
| BHQ29_RS09375 () | 2040160..2041833 | + | 1674 | WP_079783559.1 | DUF262 domain-containing HNH endonuclease family protein | - |
| BHQ29_RS09380 () | 2041873..2044128 | + | 2256 | WP_079783560.1 | BREX-1 system phosphatase PglZ type B | - |
| BHQ29_RS09385 () | 2044190..2046241 | + | 2052 | WP_202971859.1 | protease Lon-related BREX system protein BrxL | - |
| BHQ29_RS09390 () | 2046425..2049073 | - | 2649 | WP_079783561.1 | ATP-binding domain-containing protein | - |
| BHQ29_RS09395 () | 2049322..2050716 | - | 1395 | WP_079783562.1 | site-specific integrase | - |
| BHQ29_RS09400 () | 2051052..2051707 | - | 656 | Protein_1861 | glutathione S-transferase | - |
| BHQ29_RS09405 () | 2051886..2052467 | + | 582 | WP_079783563.1 | TetR/AcrR family transcriptional regulator | - |
| BHQ29_RS09410 () | 2052521..2053471 | - | 951 | WP_079783564.1 | GlxA family transcriptional regulator | - |
| BHQ29_RS09415 () | 2053644..2054237 | + | 594 | WP_079783565.1 | TetR/AcrR family transcriptional regulator | - |
| BHQ29_RS09420 () | 2054297..2054974 | + | 678 | WP_079785294.1 | type 1 glutamine amidotransferase domain-containing protein | - |
| BHQ29_RS09425 () | 2055183..2056637 | + | 1455 | WP_079783566.1 | aldehyde dehydrogenase family protein | - |
| BHQ29_RS09430 () | 2056766..2057890 | + | 1125 | WP_079783567.1 | alkene reductase | - |
| BHQ29_RS09435 () | 2057964..2059226 | + | 1263 | WP_079783568.1 | MFS transporter | - |
| BHQ29_RS09440 () | 2059219..2059446 | + | 228 | WP_079783569.1 | hypothetical protein | - |
| BHQ29_RS09445 () | 2059676..2060596 | - | 921 | WP_079783570.1 | LysR family transcriptional regulator | - |
| BHQ29_RS09450 () | 2060765..2061898 | + | 1134 | WP_079783571.1 | Gfo/Idh/MocA family oxidoreductase | - |
| BHQ29_RS09455 () | 2061971..2062855 | + | 885 | WP_202971860.1 | 3-oxoacyl-ACP reductase FabG | - |
| BHQ29_RS09460 () | 2063222..2063545 | + | 324 | WP_079783572.1 | helix-hairpin-helix domain-containing protein | - |
| BHQ29_RS09465 () | 2063708..2067121 | + | 3414 | WP_079783573.1 | exodeoxyribonuclease V subunit gamma | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|