MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 41807 bp
Accession: NZ_CP016937 Location: 4741389..4783195 Organism: Yersinia enterocolitica strain YE6 Replicon: chromosome
Accession: NZ_CP016937 Location: 4741389..4783195 Organism: Yersinia enterocolitica strain YE6 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BED33_RS21895 () | 4737002..4737922 | + | 921 | WP_010891207.1 | type III secretion system translocon subunit YopD | - |
| BED33_RS24595 () | 4738147..4738653 | + | 507 | Protein_4286 | transposase | - |
| BED33_RS21910 () | 4738696..4739799 | - | 1104 | WP_010891206.1 | type III secretion system effector YopM | - |
| BED33_RS24600 () | 4740570..4740856 | + | 287 | Protein_4288 | DDE-type integrase/transposase/recombinase | - |
| BED33_RS21920 () | 4741152..4741289 | + | 138 | WP_002212997.1 | hypothetical protein | - |
| BED33_RS23930 () | 4741464..4742553 | - | 1090 | Protein_4290 | IS3 family transposase | - |
| BED33_RS24605 () | 4742625..4742782 | - | 158 | Protein_4291 | DDE-type integrase/transposase/recombinase | - |
| BED33_RS21930 () | 4743188..4743580 | - | 393 | WP_010891204.1 | Chaperone protein SycT | VF |
| BED33_RS21935 () | 4743580..4744548 | - | 969 | WP_050294022.1 | Cysteine protease YopT | VF |
| BED33_RS21940 () | 4745069..4745617 | + | 549 | WP_010891202.1 | hypothetical protein | VF |
| BED33_RS24610 () | 4745776..4746062 | + | 287 | Protein_4295 | IS3 family transposase IS1351 | Transposase |
| BED33_RS21950 () | 4746099..4746836 | + | 738 | WP_071890449.1 | complement resistance protein TraT | - |
| BED33_RS21955 () | 4747360..4748226 | - | 867 | WP_057618955.1 | Effector protein YopJ | VF |
| BED33_RS21960 () | 4748707..4750895 | - | 2189 | Protein_4298 | Protein kinase YpkA | VF |
| BED33_RS21965 () | 4750903..4751352 | - | 450 | WP_050294025.1 | hypothetical protein | VF |
| BED33_RS24615 () | 4751514..4751600 | + | 87 | Protein_4300 | IS3 family transposase ISEam1 | Transposase |
| BED33_RS23950 () | 4751665..4752505 | + | 841 | Protein_4301 | IS3 family transposase | - |
| BED33_RS21985 () | 4752698..4753486 | - | 789 | Protein_4302 | Tn3 family transposase ISPsy39 | Transposase |
| BED33_RS21990 () | 4753486..4753743 | - | 258 | Protein_4303 | Tn3 family transposase TnpR_ISAzs17 | Transposase |
| BED33_RS21995 () | 4753743..4754330 | - | 588 | WP_080357947.1 | Adenosine monophosphate-protein transferase SoFic | VF |
| BED33_RS22000 () | 4754467..4755012 | + | 546 | WP_050294028.1 | hypothetical protein | - |
| BED33_RS22005 () | 4756002..4756880 | - | 879 | WP_162467786.1 | incFII family plasmid replication initiator RepA | - |
| BED33_RS23955 () | 4756861..4756935 | - | 75 | WP_071598612.1 | RepA leader peptide Tap | - |
| BED33_RS22010 () | 4757177..4757431 | - | 255 | WP_002229817.1 | replication regulatory protein RepA | - |
| BED33_RS22015 () | 4757569..4758114 | - | 546 | WP_050294029.1 | Phospholipase D | VF |
| BED33_RS24625 () | 4758300..4758627 | - | 328 | Protein_4310 | DDE-type integrase/transposase/recombinase | - |
| BED33_RS24630 () | 4758712..4758849 | + | 138 | Protein_4311 | transposase | - |
| BED33_RS23970 () | 4758918..4760007 | + | 1090 | Protein_4312 | IS3 family transposase | - |
| BED33_RS22025 () | 4760023..4760689 | - | 667 | Protein_4313 | conjugal transfer protein TraI | - |
| BED33_RS22035 () | 4760980..4761342 | - | 363 | Protein_4314 | hypothetical protein | - |
| BED33_RS22040 () | 4761454..4762152 | - | 699 | WP_050294038.1 | arsenic resistance NADPH-dependent reductase ArsH | - |
| BED33_RS22045 () | 4762238..4762558 | + | 321 | WP_013749489.1 | As(III)-sensing metalloregulatory transcriptional repressor ArsR | - |
| BED33_RS22050 () | 4762604..4763893 | + | 1290 | WP_057618950.1 | arsenite efflux transporter membrane subunit ArsB | - |
| BED33_RS22055 () | 4763906..4764331 | + | 426 | WP_010891244.1 | glutaredoxin-dependent arsenate reductase | - |
| BED33_RS22060 () | 4764349..4764930 | - | 582 | WP_050294040.1 | Tn3 family transposase TnpR_ISYps3 | Transposase |
| BED33_RS22065 () | 4765091..4765942 | + | 852 | WP_050294041.1 | Tn3 family transposase TnpA_ISSba14 | Transposase |
| BED33_RS22070 () | 4766098..4766550 | + | 453 | WP_010891241.1 | PprA | - |
| BED33_RS22075 () | 4766872..4767747 | - | 876 | WP_013749484.1 | DMT family transporter | - |
| BED33_RS23990 () | 4767817..4769234 | - | 1418 | Protein_4323 | Adhesin YadA | VF |
| BED33_RS23995 () | 4769832..4770393 | + | 562 | Protein_4324 | transposase family protein | - |
| BED33_RS22100 () | 4770489..4771322 | - | 834 | Protein_4325 | Tn3 family transposase TnpA_Tn3 | Transposase |
| BED33_RS22105 () | 4771495..4771845 | - | 351 | WP_016266427.1 | Yop proteins translocation protein M | VF |
| BED33_RS24000 () | 4771937..4773065 | - | 1129 | Protein_4327 | IS3 family transposase | - |
| BED33_RS22120 () | 4773378..4773596 | + | 219 | WP_013749479.1 | hypothetical protein | - |
| BED33_RS22125 () | 4773657..4774127 | - | 471 | WP_010891240.1 | IS481 family transposase ISAzs36 | Transposase |
| BED33_RS22135 () | 4774569..4775735 | + | 1167 | WP_010891239.1 | Sporulation initiation inhibitor protein Soj | VF |
| BED33_RS22140 () | 4775732..4776697 | + | 966 | WP_050294053.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| BED33_RS24005 () | 4777077..4777369 | + | 293 | Protein_4332 | IS6 family transposase ISEas1 | Transposase |
| BED33_RS22145 () | 4777535..4777777 | + | 243 | WP_005176524.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| BED33_RS22150 () | 4777770..4778069 | + | 300 | WP_014609469.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| BED33_RS22155 () | 4778210..4778869 | - | 660 | WP_072089396.1 | Outer membrane virulence protein YopE | VF |
| BED33_RS22160 () | 4779062..4779454 | + | 393 | WP_010891236.1 | YopE regulator | VF |
| BED33_RS24010 () | 4779689..4780861 | + | 1173 | Protein_4337 | IS3 family transposase | - |
| BED33_RS22175 () | 4781065..4781490 | + | 426 | WP_010891235.1 | hypothetical protein | VF |
| BED33_RS22180 () | 4781718..4783124 | - | 1407 | WP_069009740.1 | Tyrosine-protein phosphatase YopH | VF |
| BED33_RS22185 () | 4783808..4784155 | - | 348 | WP_050293994.1 | type III secretion system exported negative regulator LcrQ/YscM1 | - |
| BED33_RS22190 () | 4784355..4785026 | - | 672 | WP_080478656.1 | SctL family type III secretion system stator protein YscL | - |
| BED33_RS22195 () | 4784972..4785601 | - | 630 | WP_057618913.1 | SctK family type III secretion system sorting platform protein YscK | - |
| BED33_RS22200 () | 4785601..4786335 | - | 735 | WP_005176483.1 | SctJ family type III secretion inner membrane ring lipoprotein YscJ | - |
| BED33_RS22205 () | 4786342..4786689 | - | 348 | WP_005176480.1 | SctI family type III secretion system inner rod subunit LcrO | - |
| BED33_RS22210 () | 4786690..4787187 | - | 498 | WP_005176477.1 | T3SS polymerization control protein YopR | - |
| BED33_RS22215 () | 4787184..4787531 | - | 348 | WP_014609476.1 | type III secretion system chaperone YscG | - |
| BED33_RS22220 () | 4787533..4787796 | - | 264 | WP_014609477.1 | type III secretion system needle filament subunit SctF | - |
| BED33_RS22225 () | 4787793..4787996 | - | 204 | WP_050293995.1 | EscE/YscE/SsaE family type III secretion system needle protein co-chaperone | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|