MGE detailed information
MGE type: Genomic_island MGE length: 18721 bp
Accession: NZ_CP015842 Location: 5573554..5592274 Organism: Escherichia coli O157:H7 strain FRIK2533 Replicon: chromosome
Accession: NZ_CP015842 Location: 5573554..5592274 Organism: Escherichia coli O157:H7 strain FRIK2533 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A8V31_RS29990 () | 5568702..5569880 | - | 1179 | WP_001089435.1 | MFS transporter | - |
| A8V31_RS29995 () | 5569948..5570790 | - | 843 | WP_000746206.1 | YjiK family protein | - |
| A8V31_RS30000 () | 5571056..5573242 | - | 2187 | WP_000535053.1 | T3SS effector pentapeptide repeat protein EspX6 | - |
| A8V31_RS30005 () | 5573554..5573820 | - | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| A8V31_RS30010 () | 5573817..5574584 | - | 768 | WP_000222489.1 | hypothetical protein | - |
| A8V31_RS30015 () | 5574594..5575745 | - | 1152 | WP_001302931.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| A8V31_RS30020 () | 5575861..5577132 | - | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| A8V31_RS30025 () | 5577173..5578405 | - | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| A8V31_RS30035 () | 5578872..5579624 | + | 753 | Protein_5452 | Recombination-promoting nuclease RpnD | VF |
| A8V31_RS31385 () | 5579629..5579829 | + | 201 | WP_001310455.1 | hypothetical protein | - |
| A8V31_RS30040 () | 5580072..5581484 | - | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| A8V31_RS30050 () | 5581661..5581825 | + | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| A8V31_RS30055 () | 5581922..5582803 | + | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| A8V31_RS30060 () | 5582851..5584014 | + | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| A8V31_RS30065 () | 5584061..5584402 | - | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| - () | 5584397..5584473 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 5584397..5584473 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 5584397..5584473 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 5584397..5584473 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 5584397..5584473 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 5584397..5584473 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 5584397..5584473 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 5584397..5584473 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| A8V31_RS30070 () | 5584623..5586377 | - | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| A8V31_RS30075 () | 5586377..5587846 | - | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| A8V31_RS30080 () | 5587913..5590345 | - | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| A8V31_RS30085 () | 5590623..5590907 | + | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| A8V31_RS30090 () | 5590916..5592274 | + | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| A8V31_RS30095 () | 5592343..5593299 | - | 957 | WP_001297640.1 | GTPase | - |
| A8V31_RS30100 () | 5593310..5593513 | - | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| A8V31_RS30105 () | 5593563..5595713 | - | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| A8V31_RS30115 () | 5596006..5596548 | - | 543 | WP_000934391.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0 |