MGE detailed information
MGE type: Mobilizable plasmid MGE length: 50899 bp
Accession: NZ_CP015838 Location: 1..50899 Organism: Escherichia coli strain MS6198 Replicon: plasmid pMS6198D
Accession: NZ_CP015838 Location: 1..50899 Organism: Escherichia coli strain MS6198 Replicon: plasmid pMS6198D
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MS6198_RS27745 () | 849..1112 | + | 264 | WP_032180564.1 | ash family protein | - |
| MS6198_RS27750 () | 1030..1317 | + | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| MS6198_RS27755 () | 1759..2064 | + | 306 | Protein_2 | transcription termination factor NusG | - |
| MS6198_RS27760 () | 2078..2775 | - | 698 | Protein_3 | IS1 family transposase | - |
| MS6198_RS27765 () | 2831..3988 | - | 1158 | Protein_4 | IS1380 family transposase ISEcp1 | Transposase |
| MS6198_RS31385 () | 4174..4521 | - | 348 | Protein_5 | protein finQ | - |
| - () | 4724..4784 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 4724..4784 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 4724..4784 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 4724..4784 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| MS6198_RS27775 () | 4836..4988 | + | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| MS6198_RS27780 () | 5060..5311 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| MS6198_RS27785 () | 5611..5907 | + | 297 | WP_011264046.1 | hypothetical protein | - |
| MS6198_RS31625 () | 5972..6148 | - | 177 | WP_001054897.1 | hypothetical protein | - |
| MS6198_RS27800 () | 6540..6749 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| MS6198_RS27805 () | 6974..7671 | + | 698 | Protein_11 | IS1 family transposase | - |
| MS6198_RS27815 () | 8124..9268 | + | 1145 | Protein_12 | Beta-lactamase | ARG |
| MS6198_RS27820 () | 9362..9895 | + | 534 | WP_001221666.1 | lipocalin family protein | - |
| MS6198_RS27825 () | 9892..10209 | - | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| MS6198_RS27830 () | 10438..11187 | + | 750 | Protein_15 | protein finQ | - |
| - () | 11257..11314 | + | 58 | NuclAT_1 | - | - |
| - () | 11257..11314 | + | 58 | NuclAT_1 | - | - |
| - () | 11257..11314 | + | 58 | NuclAT_1 | - | - |
| - () | 11257..11314 | + | 58 | NuclAT_1 | - | - |
| MS6198_RS27835 () | 11494..12702 | + | 1209 | WP_011264049.1 | IncI1-type conjugal transfer protein TrbA | - |
| MS6198_RS27840 () | 12721..13791 | + | 1071 | WP_011264050.1 | IncI1-type conjugal transfer protein TrbB | - |
| MS6198_RS27845 () | 13784..16075 | + | 2292 | WP_011264051.1 | hypothetical protein | - |
| MS6198_RS27850 () | 16113..18812 | - | 2700 | WP_011264053.1 | Protein TraI | Relaxase |
| MS6198_RS27855 () | 18823..19155 | - | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| MS6198_RS27860 () | 19389..19724 | + | 336 | WP_021529212.1 | hypothetical protein | - |
| MS6198_RS27865 () | 19811..20659 | - | 849 | WP_001599394.1 | DUF4942 domain-containing protein | - |
| MS6198_RS27870 () | 21008..21205 | + | 198 | WP_001161107.1 | hypothetical protein | - |
| MS6198_RS27875 () | 21239..21490 | + | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| MS6198_RS27880 () | 21521..21727 | - | 207 | WP_000150314.1 | hypothetical protein | VF |
| MS6198_RS27885 () | 21789..22691 | - | 903 | WP_011264057.1 | Recombination-promoting nuclease RpnA | VF |
| MS6198_RS27890 () | 22688..23077 | - | 390 | WP_000833767.1 | hypothetical protein | - |
| MS6198_RS27895 () | 23254..23520 | - | 267 | WP_000804663.1 | hypothetical protein | - |
| MS6198_RS27900 () | 23614..24048 | - | 435 | WP_000218858.1 | hypothetical protein | - |
| MS6198_RS27905 () | 24777..25277 | - | 501 | WP_000117626.1 | antirestriction protein ArdA | - |
| MS6198_RS31630 () | 25739..25891 | - | 153 | WP_162705898.1 | hypothetical protein | - |
| MS6198_RS27910 () | 25861..26334 | - | 474 | WP_069383082.1 | hypothetical protein | - |
| MS6198_RS27915 () | 26331..27050 | - | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| MS6198_RS27920 () | 27047..27480 | - | 434 | Protein_34 | conjugation system SOS inhibitor PsiB | - |
| MS6198_RS27925 () | 27533..28822 | - | 1290 | Protein_35 | hypothetical protein | - |
| MS6198_RS27930 () | 29005..30906 | - | 1902 | WP_000936285.1 | group II intron reverse transcriptase/maturase | - |
| MS6198_RS27940 () | 32725..34392 | + | 1668 | WP_012372796.1 | group II intron reverse transcriptase/maturase | - |
| MS6198_RS27945 () | 34670..34861 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| MS6198_RS27950 () | 34858..35280 | - | 423 | WP_000271762.1 | DUF1380 family protein | - |
| MS6198_RS27955 () | 35327..35629 | - | 303 | WP_001671341.1 | antirestriction protein | - |
| MS6198_RS31395 () | 36170..36940 | - | 771 | WP_011264064.1 | hypothetical protein | - |
| MS6198_RS27970 () | 36985..37419 | - | 435 | WP_011264065.1 | DUF1380 family protein | - |
| MS6198_RS27975 () | 37433..37654 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| MS6198_RS27980 () | 37655..38338 | - | 684 | WP_000086127.1 | DNA methylase | - |
| MS6198_RS30750 () | 38414..38724 | - | 311 | Protein_45 | hypothetical protein | - |
| MS6198_RS27990 () | 38728..39150 | - | 423 | WP_000774832.1 | plasmid partitioning/stability family protein | - |
| MS6198_RS27995 () | 39153..40133 | - | 981 | WP_012783921.1 | plasmid segregation protein ParM | - |
| MS6198_RS28000 () | 40471..40806 | + | 336 | WP_001340323.1 | hypothetical protein | - |
| MS6198_RS28005 () | 40901..41803 | - | 903 | WP_001739825.1 | DUF1281 domain-containing protein | - |
| MS6198_RS28010 () | 42221..42469 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| MS6198_RS28015 () | 42466..42903 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| MS6198_RS28020 () | 42903..44174 | + | 1272 | WP_001703910.1 | Y-family DNA polymerase | - |
| MS6198_RS28025 () | 44370..44996 | + | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| MS6198_RS31635 () | 44993..45295 | + | 303 | WP_001245884.1 | hypothetical protein | - |
| MS6198_RS28035 () | 45810..47156 | - | 1347 | WP_039052405.1 | hypothetical protein | - |
| MS6198_RS28040 () | 47510..48112 | + | 603 | WP_001703912.1 | hypothetical protein | - |
| MS6198_RS28045 () | 48168..48677 | + | 510 | WP_012783913.1 | hypothetical protein | - |
| MS6198_RS31640 () | 48910..49050 | - | 141 | WP_032072206.1 | hypothetical protein | - |
| MS6198_RS28050 () | 49745..50776 | - | 1032 | WP_023518831.1 | RepZ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|