MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 66556 bp
Accession: NZ_CP015834 Location: 3335941..3402496 Organism: Escherichia coli strain MS6198 Replicon: chromosome
Accession: NZ_CP015834 Location: 3335941..3402496 Organism: Escherichia coli strain MS6198 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MS6198_RS16315 () | 3331242..3332498 | + | 1257 | WP_001049791.1 | nucleoside permease NupG | - |
| MS6198_RS16320 () | 3332547..3334682 | - | 2136 | WP_022646105.1 | ornithine decarboxylase | - |
| MS6198_RS31735 () | 3334845..3334922 | - | 78 | WP_212734103.1 | hypothetical protein | - |
| MS6198_RS16325 () | 3335075..3335782 | + | 708 | WP_000234532.1 | DUF554 domain-containing protein | - |
| MS6198_RS16335 () | 3336161..3337426 | + | 1266 | WP_001218869.1 | Prophage integrase IntS ; Integrase | Integrase |
| MS6198_RS16340 () | 3337682..3338725 | + | 1044 | WP_000147018.1 | hypothetical protein | - |
| MS6198_RS16345 () | 3339255..3339952 | + | 698 | Protein_3133 | IS1 family transposase IS1R | Transposase |
| MS6198_RS31105 () | 3339969..3340760 | + | 792 | Protein_3134 | IS3 family transposase | - |
| MS6198_RS16355 () | 3340927..3341478 | + | 552 | WP_001447126.1 | Transcriptional repressor MprA | VF |
| MS6198_RS16365 () | 3341945..3342642 | - | 698 | Protein_3136 | IS1 family transposase IS1S | Transposase |
| MS6198_RS16380 () | 3342785..3344284 | - | 1500 | WP_001331567.1 | basic amino acid/polyamine antiporter | - |
| MS6198_RS16385 () | 3344359..3346728 | - | 2370 | WP_000671170.1 | arginine decarboxylase | - |
| MS6198_RS16390 () | 3346833..3348302 | - | 1470 | WP_001331566.1 | basic amino acid/polyamine antiporter | - |
| MS6198_RS30465 () | 3348555..3349248 | + | 694 | Protein_3140 | IS1 family transposase IS1N | Transposase |
| MS6198_RS16410 () | 3349866..3350213 | + | 348 | WP_001564031.1 | alcohol dehydrogenase catalytic domain-containing protein | - |
| MS6198_RS16415 () | 3350283..3350540 | + | 258 | Protein_3142 | IS3 family transposase IS911 | Transposase |
| MS6198_RS16420 () | 3350738..3351211 | - | 474 | Protein_3143 | IS3 family transposase IS629 | Transposase |
| MS6198_RS16425 () | 3351301..3351714 | - | 414 | Protein_3144 | group II intron reverse transcriptase/maturase | - |
| MS6198_RS16430 () | 3351711..3351890 | - | 180 | Protein_3145 | hypothetical protein | VF |
| MS6198_RS16440 () | 3352284..3352568 | - | 285 | WP_077877385.1 | ATP-binding domain-containing protein | - |
| MS6198_RS30475 () | 3352598..3353775 | + | 1178 | WP_152895938.1 | IS3 family transposase ISEc31 | Transposase |
| MS6198_RS16455 () | 3353785..3355290 | - | 1506 | Protein_3148 | NERD domain-containing protein | - |
| MS6198_RS29080 () | 3355433..3355693 | - | 261 | Protein_3149 | IS3 family transposase ISLad1 | Transposase |
| MS6198_RS16460 () | 3356414..3356605 | + | 192 | WP_001287883.1 | DUF4222 domain-containing protein | - |
| MS6198_RS16465 () | 3356658..3356891 | - | 234 | WP_000124185.1 | hypothetical protein | - |
| MS6198_RS16470 () | 3356987..3357487 | - | 501 | Protein_3152 | DNA-binding protein | - |
| MS6198_RS16475 () | 3357844..3358962 | + | 1119 | WP_000135343.1 | NAD-dependent methanol dehydrogenase | VF |
| MS6198_RS16480 () | 3359102..3359788 | + | 687 | WP_001109982.1 | propanediol utilization system phosphotransacylase GrpB | - |
| MS6198_RS16485 () | 3359843..3360601 | + | 759 | WP_001332070.1 | propanediol utilization system chaperone GrpC | - |
| MS6198_RS16490 () | 3360585..3361310 | + | 726 | WP_001329683.1 | propanediol utilization system flavoprotein GrpD | - |
| MS6198_RS16495 () | 3361322..3361591 | + | 270 | WP_001564041.1 | propanediol utilization microcompartment vertex protein GrpE | - |
| MS6198_RS16500 () | 3361619..3362116 | + | 498 | WP_001564042.1 | propanediol utilization system heme-binding protein GrpF | - |
| MS6198_RS16505 () | 3362145..3363341 | + | 1197 | WP_001362987.1 | propanediol utilization system propionate kinase GrpG | - |
| MS6198_RS16510 () | 3363626..3363907 | + | 282 | WP_001301171.1 | propanediol utilization system shell hexameric protein GrpH | - |
| MS6198_RS16515 () | 3363929..3364714 | + | 786 | WP_001205499.1 | propanediol utilization microcompartment protein GrpI | - |
| MS6198_RS16520 () | 3364775..3366292 | + | 1518 | WP_000997839.1 | Aldehyde-alcohol dehydrogenase | VF |
| MS6198_RS16525 () | 3366316..3366615 | + | 300 | WP_000746009.1 | propanediol utilization system shell hexameric protein GrpK | - |
| MS6198_RS16530 () | 3366626..3367201 | + | 576 | WP_000722279.1 | propanediol utilization system protease GrpL | - |
| MS6198_RS16535 () | 3367250..3369802 | + | 2553 | WP_000890295.1 | glycyl radical diol dehydratase GrpM | - |
| MS6198_RS16540 () | 3369911..3370828 | + | 918 | WP_001564043.1 | glycyl radical diol dehydratase-activating enzyme GrpN | - |
| MS6198_RS16545 () | 3370965..3371870 | + | 906 | WP_001564044.1 | propanediol utilization system permease GrpO | - |
| MS6198_RS16550 () | 3372482..3372851 | + | 370 | Protein_3168 | reverse transcriptase/maturase | - |
| MS6198_RS16555 () | 3372851..3373444 | + | 594 | Protein_3169 | maturase | - |
| MS6198_RS16560 () | 3374060..3375322 | + | 1263 | WP_001329690.1 | propanediol utilization sensor histidine kinase GrpP | - |
| MS6198_RS16565 () | 3375339..3376394 | + | 1056 | WP_001564046.1 | HTH-type transcriptional activator Btr | VF |
| MS6198_RS16570 () | 3376523..3377674 | + | 1152 | WP_001001003.1 | propanediol utilization system methionine adenosyltransferase GrpR | - |
| MS6198_RS16575 () | 3377719..3378264 | + | 546 | WP_001564047.1 | propanediol utilization system shell hexameric protein GrpS | - |
| MS6198_RS29090 () | 3378621..3378914 | - | 294 | Protein_3174 | helix-turn-helix domain-containing protein | - |
| MS6198_RS30490 () | 3378937..3379587 | - | 651 | WP_001564048.1 | TetR/AcrR family transcriptional regulator | - |
| MS6198_RS16585 () | 3379708..3380865 | - | 1158 | Protein_3176 | Multidrug resistance protein MexB | VF |
| MS6198_RS16590 () | 3380956..3381222 | + | 267 | Protein_3177 | IS3 family transposase IS2 | Transposase |
| MS6198_RS30495 () | 3381284..3381509 | - | 226 | Protein_3178 | hypothetical protein | - |
| MS6198_RS16595 () | 3381521..3381754 | - | 234 | WP_000958492.1 | AlpA family transcriptional regulator | - |
| MS6198_RS16600 () | 3381823..3382398 | - | 576 | WP_001564054.1 | hypothetical protein | - |
| MS6198_RS16605 () | 3382656..3383222 | - | 567 | WP_001126810.1 | inovirus-type Gp2 protein | - |
| MS6198_RS16610 () | 3384523..3385617 | + | 1095 | WP_000370278.1 | sugar kinase | - |
| MS6198_RS16615 () | 3385636..3386886 | - | 1251 | WP_001328687.1 | NupC/NupG family nucleoside CNT transporter | - |
| MS6198_RS16620 () | 3386970..3387905 | - | 936 | WP_001290195.1 | pseudouridine-5'-phosphate glycosidase | - |
| MS6198_RS16625 () | 3387898..3388833 | - | 936 | WP_000332862.1 | pseudouridine kinase | - |
| MS6198_RS16630 () | 3389369..3389821 | - | 453 | WP_000558152.1 | N-acetyltransferase | - |
| MS6198_RS16640 () | 3390342..3391073 | - | 732 | WP_001075495.1 | inovirus Gp2 family protein | - |
| MS6198_RS16645 () | 3391743..3392273 | + | 531 | WP_000778605.1 | hypothetical protein | - |
| MS6198_RS16655 () | 3393436..3394659 | - | 1224 | WP_001107219.1 | hypothetical protein | - |
| MS6198_RS16660 () | 3394760..3395644 | + | 885 | WP_001564055.1 | 50S ribosome-binding GTPase | - |
| MS6198_RS16670 () | 3395847..3396527 | + | 681 | WP_001278649.1 | WYL domain-containing protein | - |
| MS6198_RS16675 () | 3396678..3397355 | + | 678 | WP_001564058.1 | hypothetical protein | - |
| MS6198_RS16680 () | 3397361..3397594 | + | 234 | WP_001278293.1 | DUF905 family protein | - |
| MS6198_RS16685 () | 3397684..3398502 | + | 819 | WP_001175165.1 | DUF945 domain-containing protein | - |
| MS6198_RS16690 () | 3398768..3399247 | + | 480 | WP_033869257.1 | antirestriction protein | - |
| MS6198_RS16695 () | 3399263..3399739 | + | 477 | WP_001186774.1 | RadC family protein | - |
| MS6198_RS16700 () | 3399804..3400025 | + | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| MS6198_RS16710 () | 3400188..3400556 | + | 369 | WP_038432125.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| MS6198_RS16715 () | 3400646..3401023 | + | 378 | WP_001564063.1 | TA system toxin CbtA family protein | Toxin Detail |
| MS6198_RS31740 () | 3401020..3401169 | + | 150 | Protein_3200 | hypothetical protein | - |
| MS6198_RS31745 () | 3401248..3401442 | + | 195 | WP_024181941.1 | DUF957 domain-containing protein | - |
| MS6198_RS29115 () | 3401527..3402369 | + | 843 | Protein_3202 | DUF4942 domain-containing protein | - |
| MS6198_RS16740 () | 3402711..3402881 | + | 171 | Protein_3203 | IS110 family transposase | - |
| MS6198_RS16745 () | 3403692..3404675 | + | 984 | WP_001361242.1 | KpsF/GutQ family sugar-phosphate isomerase | - |
| MS6198_RS16750 () | 3404747..3405895 | + | 1149 | WP_000905920.1 | capsule polysaccharide export inner-membrane protein KpsE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|